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TOUCAN 2: the all-inclusive open source workbench for regulatory sequence analysis.

by: S. Aerts, P. Van Loo, G. Thijs, H. Mayer, R. de Martin, Y. Moreau, B. De Moor
Nucleic Acids Res, Vol. 33, No. Web Server issue. (1 July 2005)

X Abstract

We present the second and improved release of the TOUCAN workbench for cis-regulatory sequence analysis. TOUCAN implements and integrates fast state-of-the-art methods and strategies in gene regulation bioinformatics, including algorithms for comparative genomics and for the detection of cis-regulatory modules. This second release of TOUCAN has become open source and thereby carries the potential to evolve rapidly. The main goal of TOUCAN is to allow a user to come to testable hypotheses regarding the regulation of a gene or of a set of co-regulated genes. TOUCAN can be launched from this location: http://www.esat.kuleuven.ac.be/~saerts/software/toucan.php.

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