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Author Hood [130 articles]

Recent papers posted to CiteULike by the author Hood.
  • Finite-size errors in quantum many-body simulations of extended systems
    Physical Review B, Vol. 59, No. 3. (15 January 1999), 1917.
    by PRC Kent, Randolph Q Hood, AJ Williamson, RJ Needs, WMC Foulkes, G Rajagopal
    posted to mpc finite_size_errors casino by driver on 2008-08-18 16:12:27 as **
  • Exchange and correlation in silicon
    Physical Review B, Vol. 57, No. 15. (15 April 1998), 8972.
    by Randolph Q Hood, MY Chou, AJ Williamson, G Rajagopal, RJ Needs
    posted to xc-hole silicon qmc pair_correlation_function by driver on 2008-08-14 02:55:14 as **
  • A Predictive Model for Transcriptional Control of Physiology in a Free Living Cell
    Cell, Vol. 131, No. 7. (28 December 2007), pp. 1354-1365.
    by Richard Bonneau, Marc T Facciotti, David J Reiss, Amy K Schmid, Min Pan, Amardeep Kaur, Vesteinn Thorsson, Paul Shannon, Michael H Johnson, Christopher J Bare, William Longabaugh, Madhavi Vuthoori, Kenia Whitehead, Aviv Madar, Lena Suzuki, Tetsuya Mori, Dong-Eun Chang, Jocelyne Diruggiero, Carl H Johnson, Leroy Hood, Nitin S Baliga
    posted to no-tag by Borelli on 2008-08-13 17:28:36 as ** along with 6 people roys jyuh tmmurali raiyar oelemento emptyhb
  • The Inferelator: an algorithm for learning parsimonious regulatory networks from systems-biology data sets de novo.
    Genome Biol, Vol. 7, No. 5. (2006)
    by R Bonneau, DJ Reiss, P Shannon, M Facciotti, L Hood, NS Baliga, V Thorsson
    posted to network_inference clustering by roys on 2008-08-13 17:22:54 as ** along with 3 people dragonrez jfr frohike
  • Bacterial contingency loci: the role of simple sequence DNA repeats in bacterial adaptation.
    Annual review of genetics, Vol. 40 (2006), pp. 307-333.
    by R Moxon, C Bayliss, D Hood
    posted to contingency_loci adaptation by cambray on 2008-08-07 15:15:04 as **
  • Contraction band necrosis: its modification by the free radical scavenger N-2-mercaptopropionyl glycine.
    Journal of cardiovascular pharmacology, Vol. 24, No. 5. (November 1994), pp. 694-701.
    by SC Widman, CS Liang, EA Schenk, WB Hood
    posted to nmpg by MllePapillon on 2008-07-28 14:27:16 as **
  • Mating System of the Anther Smut Fungus Microbotryum violaceum: Selfing under Heterothallism
    Eukaryotic Cell, Vol. 7, No. 5. (1 May 2008), pp. 765-775.
    by Tatiana Giraud, Roxana Yockteng, Manuela Lopez-Villavicencio, Guislaine Refregier, Michael E Hood
    posted to smuth selfing microbotryum mating_type mating_systems fungus by stajich to the group Berkeley Mycology on 2008-07-27 08:14:48 as **
  • Systems biology and cancer stem cells.
    Journal of cellular and molecular medicine, Vol. 12, No. 1. (b 2008), pp. 97-110.
    by ND Price, G Foltz, A Madan, L Hood, Q Tian
    posted to cancer by MllePapillon on 2008-07-25 17:56:49 as ** along with 1 person inesdesantiago
  • A genomic regulatory network for development.
    Science, Vol. 295, No. 5560. (1 March 2002), pp. 1669-1678.
    by EH Davidson, JP Rast, P Oliveri, A Ransick, C Calestani, CH Yuh, T Minokawa, G Amore, V Hinman, C Arenas-Mena, O Otim, CT Brown, CB Livi, PY Lee, R Revilla, AG Rust, Z Pan, MJ Schilstra, PJ Clarke, MI Arnone, L Rowen, RA Cameron, DR McClay, L Hood, H Bolouri
    posted to model mesc_project development by lukaswindhager on 2008-07-25 08:09:01 as **** along with 7 people and 1 group dquest edvin balajis adepace margaritis ccr lusk EisenLab
  • Molecular profiling of stem cells.
    Clinica chimica acta; international journal of clinical chemistry, Vol. 378, No. 1-2. (March 2007), pp. 24-32.
    by L Ma, B Sun, L Hood, Q Tian
    posted to transcription review proteome by inesdesantiago on 2008-07-24 16:29:27 as *****
  • Integrated Genomic and Proteomic Analyses of Gene Expression in Mammalian Cells
    Mol Cell Proteomics, Vol. 3, No. 10. (1 October 2004), pp. 960-969.
    by Qiang Tian, Serguei B Stepaniants, Mao Mao, Lee Weng, Megan C Feetham, Michelle J Doyle, Eugene C Yi, Hongyue Dai, Vesteinn Thorsson, Jimmy Eng, David Goodlett, Joel P Berger, Bert Gunter, Peter S Linseley, Roland B Stoughton, Ruedi Aebersold, Steven J Collins, William A Hanlon, Leroy E Hood
    posted to proteome integration by inesdesantiago on 2008-07-24 16:17:33 as *****
  • Treatment of primary pulmonary hypertension with continuous intravenous prostacyclin (epoprostenol). Results of a randomized trial.
    Annals of internal medicine, Vol. 112, No. 7. (1 April 1990), pp. 485-491.
    by LJ Rubin, J Mendoza, M Hood, M McGoon, R Barst, WB Williams, JH Diehl, J Crow, W Long
    posted to pah by djmonstermo on 2008-07-11 17:37:36 as **
  • The impact of systems approaches on biological problems in drug discovery.
    Nature biotechnology, Vol. 22, No. 10. (October 2004), pp. 1215-1217.
    by L Hood, RM Perlmutter
    posted to systems review pharmacogen medicine ellstalk disease compound by raiyar on 2008-07-10 10:05:42 as read
  • Effect of dietary protein intake on serum total CO2 concentration in chronic kidney disease: Modification of Diet in Renal Disease study findings.
    Clinical journal of the American Society of Nephrology : CJASN, Vol. 1, No. 1. (January 2006), pp. 52-57.
    by FJ Gennari, VL Hood, T Greene, X Wang, AS Levey
    posted to rct lpd ckd by jyuh on 2008-06-28 09:36:13 as **
  • The stress of the transition to university: a longitudinal study of psychological disturbance, absent-mindedness and vulnerability to homesickness.
    British journal of psychology (London, England : 1953), Vol. 78 ( Pt 4) (November 1987), pp. 425-441.
    by S Fisher, B Hood
    posted to transition stress college by lackaff on 2008-06-25 18:15:36 as **
  • Immunology in the post-genomic era
    Nat Immunol, Vol. 2, No. 5. (May 2001), pp. 373-375.
    by Alan Aderem, Leroy Hood
    posted to immune by tomhebbron on 2008-06-21 13:46:47 as **
  • Integration of biological networks and gene expression data using Cytoscape.
    Nat Protoc, Vol. 2, No. 10. (2007), pp. 2366-2382.
    by MS Cline, M Smoot, E Cerami, A Kuchinsky, N Landys, C Workman, R Christmas, I Avila-Campilo, M Creech, B Gross, K Hanspers, R Isserlin, R Kelley, S Killcoyne, S Lotia, S Maere, J Morris, K Ono, V Pavlovic, AR Pico, A Vailaya, PL Wang, A Adler, BR Conklin, L Hood, M Kuiper, C Sander, I Schmulevich, B Schwikowski, GJ Warner, T Ideker, GD Bader
    posted to software overview networks cytoscape by AlexanderPico on 2008-06-17 03:41:10 as read along with 5 people and 1 group jyuh jfr shikin shung thomaskelder GeneGo
  • Regulatory gene networks and the properties of the developmental process.
    Proc Natl Acad Sci U S A, Vol. 100, No. 4. (18 February 2003), pp. 1475-1480.
    by EH Davidson, DR McClay, L Hood
    posted to grn gene-regulation gene-networks evolution-of-shape evolution evo-devo embryogenesis development by mjoach on 2008-06-06 16:19:08 as **** along with 3 people shikin nsamways margaritis
  • Where, oh where has my protein gone?
    Trends in Biotechnology, Vol. 22, No. 2. (February 2004), pp. 53-55.
    by Elizabeth E Hood
    posted to targeting protein pharming cells by ricmilne on 2008-06-02 19:10:09 as **
  • Beaver (Castor canadensis) mitigate the effects of climate on the area of open water in boreal wetlands in western Canada
    Biological Conservation, Vol. 141, No. 2. (February 2008), pp. 556-567.
    by Glynnis A Hood, Suzanne E Bayley
    posted to dam climate-change climate castor-canadensis castor canadensis beaver by roodubh on 2008-05-23 13:40:28 as **
  • A new approach to decoding life: systems biology.
    Annu Rev Genomics Hum Genet, Vol. 2 (2001), pp. 343-372.
    by T Ideker, T Galitski, L Hood
    posted to systembiology by cerca on 2008-05-23 06:25:34 as ** along with 6 people and 1 group okarsligil wnpx biosv mangtronix shikin lh1 Bioinformatics
  • Systems biology and new technologies enable predictive and preventative medicine.
    Science, Vol. 306, No. 5696. (22 October 2004), pp. 640-643.
    by L Hood, JR Heath, ME Phelps, B Lin
    posted to technology networks medicine cytoscape by AlexanderPico on 2008-05-19 23:50:32 as read along with 5 people and 1 group raiyar shikin wnpx cconboy maburkitt GeneGo
  • Gene regulatory networks and embryonic specification.
    Proceedings of the National Academy of Sciences of the United States of America (15 April 2008)
    by Leroy Hood
    posted to networks development by AlexanderPico on 2008-05-19 23:10:17 as ** along with 2 people bootsy maralena
  • Speciation in fungi.
    Fungal genetics and biology : FG & B, Vol. 45, No. 6. (June 2008), pp. 791-802.
    by T Giraud, G Refrégier, M Le Gac, DM de Vienne, ME Hood
    posted to fungi by jamselem on 2008-05-19 08:04:02 as **
  • Levodopa slows prosaccades and improves antisaccades: an eye movement study in Parkinson's disease.
    Journal of neurology, neurosurgery, and psychiatry, Vol. 78, No. 6. (June 2007), pp. 565-570.
    by AJ Hood, SC Amador, AE Cain, KA Briand, Al AH Refai, MC Schiess, AB Sereno
    posted to parkinsons eye-movements by mbolding on 2008-05-16 04:42:47 as **
  • Events upstream of mitochondrial protein import limit the oxidative capacity of fibroblasts in multiple mitochondrial disease.
    Biochimica et biophysica acta, Vol. 1586, No. 2. (16 March 2002), pp. 146-154.
    by AA Rungi, A Primeau, L Nunes Christie, JW Gordon, BH Robinson, DA Hood
    posted to no-tag by bunty on 2008-05-15 22:05:23 as **
  • Integrated genomic and proteomic analyses of a systematically perturbed metabolic network.
    Science, Vol. 292, No. 5518. (4 May 2001), pp. 929-934.
    by T Ideker, V Thorsson, JA Ranish, R Christmas, J Buhler, JK Eng, R Bumgarner, DR Goodlett, R Aebersold, L Hood
    posted to systemsbiology pathways pathwayanalysis by thomaskelder on 2008-05-13 09:58:29 as ** along with 10 people and 3 groups shikin snuppepuppan BioGeek dragonrez bpb okarsligil opheliav wnpx gurkanbebek raiyar GeneGo Bioinformatics steinmetzlab
  • Competency, Bureaucracy, and Public Management Reform: A Comparative Analysis
    Governance, Vol. 17, No. 3. (2004), pp. 313-333.
    by Christopher Hood, Martin Lodge
    posted to institutionalism administration by kokarev on 2008-05-08 09:26:08 as **
  • The effect of training on the expression of mitochondrial biogenesis- and apoptosis-related proteins in skeletal muscle of patients with mtDNA defects.
    American journal of physiology. Endocrinology and metabolism, Vol. 293, No. 3. (September 2007)
    by PJ Adhihetty, T Taivassalo, RG Haller, DR Walkinshaw, DA Hood
    posted to miopathy exercise_training by LHON on 2008-05-06 16:28:14 as *****
  • Direct multiplexed measurement of gene expression with color-coded probe pairs.
    Nat Biotechnol (17 February 2008)
    by Gary K K Geiss, Roger E E Bumgarner, Brian Birditt, Timothy Dahl, Naeem Dowidar, Dwayne L L Dunaway, H Perry P Fell, Sean Ferree, Renee D D George, Tammy Grogan, Jeffrey J J James, Malini Maysuria, Jeffrey D D Mitton, Paola Oliveri, Jennifer L L Osborn, Tao Peng, Amber L L Ratcliffe, Philippa J J Webster, Eric H H Davidson, Leroy Hood
    posted to microarray_technology by jfr on 2008-05-05 11:05:40 as ** along with 6 people and 2 groups psique jyuh austin vplagnol GeeSharpMinor shikin parkinson's disease references GeneGo
  • Complementary profiling of gene expression at the transcriptome and proteome levels in Saccharomyces cerevisiae.
    Molecular & cellular proteomics : MCP, Vol. 1, No. 4. (April 2002), pp. 323-333.
    by TJ Griffin, SP Gygi, T Ideker, B Rist, J Eng, L Hood, R Aebersold
    posted to systems_biology by shikin to the group GeneGo on 2008-05-04 13:30:30 as **
  • Proteomic and Biochemical Analysis of Purified Human Immunodeficiency Virus Type 1 Produced from Infected Monocyte-Derived Macrophages
    J. Virol., Vol. 80, No. 18. (15 September 2006), pp. 9039-9052.
    by Elena Chertova, Oleg Chertov, Lori V Coren, James D Roser, Charles M Trubey, Julian W Bess, Raymond C Sowder, Eugene Barsov, Brian L Hood, Robert J Fisher, Kunio Nagashima, Thomas P Conrads, Timothy D Veenstra, Jeffrey D Lifson, David E Ott
    posted to structure by kieran101 to the group Malim Lab on 2008-04-25 14:46:32 as read
  • A data integration methodology for systems biology.
    Proc Natl Acad Sci U S A (21 November 2005)
    by Daehee Hwang, Alistair G G Rust, Stephen Ramsey, Jennifer J J Smith, Deena M M Leslie, Andrea D D Weston, Pedro de Atauri, John D D Aitchison, Leroy Hood, Andrew F F Siegel, Hamid Bolouri
    posted to data-integration heterogeneous-data-sources systems-biology by nedwards on 2008-04-17 16:52:24 as ** along with 17 people and 3 groups brian tmmurali dragonrez okarsligil jfr lfriedl Schmidtc eweaver wnpx biosv Sharpshoot noano mbeautru reidy grahamc GeeSharpMinor athleem kdl Bioinformatics JJJ
  • A data integration methodology for systems biology: Experimental verification
    PNAS, Vol. 102, No. 48. (29 November 2005), pp. 17302-17307.
    by Daehee Hwang, Jennifer J Smith, Deena M Leslie, Andrea D Weston, Alistair G Rust, Stephen Ramsey, Pedro de Atauri, Andrew F Siegel, Hamid Bolouri, John D Aitchison, Leroy Hood
    posted to data-integration heterogeneous-data-sources systems-biology by nedwards on 2008-04-17 16:51:56 as ** along with 10 people and 2 groups Retchless tmmurali dragonrez okarsligil lfriedl lyongu eweaver wnpx mbeautru GeeSharpMinor kdl Bioinformatics
  • Systems biology: integrating technology, biology, and computation.
    Mechanisms of ageing and development, Vol. 124, No. 1. (January 2003), pp. 9-16.
    by L Hood
    posted to new sysbio by irenas on 2008-04-14 14:41:30 as **
  • Measurement of Conditional Phase Shifts for Quantum Logic
    Physical Review Letters, Vol. 75, No. 25. (18 December 1995), 4710.
    by QA Turchette, CJ Hood, W Lange, H Mabuchi, HJ Kimble
    posted to logic quantum by martinthesis on 2008-04-12 14:53:34 as ** along with 1 person amcdawes
  • The influence of episodic events on transport of striped bass eggs to the estuarine turbidity maximum nursery area
    Estuaries and Coasts, Vol. 28, No. 1. (26 February 2005), pp. 108-123.
    by E North, R Hood, S Chao, L Sanford
    posted to bass environmental etm events striped by vafentoulis on 2008-04-10 20:31:08 as **
  • Maximizing gain per effort by using clonal replicates in genetic tests
    Theoretical and Applied Genetics, Vol. 71, No. 3. (1 December 1985), pp. 392-399.
    by DV Shaw, JV Hood
    posted to clone by tkdoerksen on 2008-03-28 04:12:09 as read
  • Testing for differentially-expressed genes by maximum-likelihood analysis of microarray data.
    J Comput Biol, Vol. 7, No. 6. (2000), pp. 805-817.
    by T Ideker, V Thorsson, AF Siegel, LE Hood
    posted to microarray normalization proteinmicroarray by baldigroup on 2008-03-24 13:29:24 as ****
  • An evaluation of freezing as a preservation technique for analyzing dissolved organic C, N and P in surface water samples
    Science of The Total Environment, Vol. 392, No. 2-3. (25 March 2008), pp. 305-312.
    by Jason B Fellman, David V D'Amore, Eran Hood
    posted to hydro by hmarijke on 2008-03-21 00:49:05 as **
  • Primary Cell Experiments with TG101348, a JAK2-Selective Inhibitor, in the Presence of Myeloproliferative Disorder-Associated JAK2V617F, MPLW515L/K, and JAK2 Exon 12 Mutations.
    ASH Annual Meeting Abstracts, Vol. 110, No. 11. (16 November 2007), 3541.
    by Terra L Lasho, Christy Finke, John D Hood, Richard Soll, Glenn Noronha, Ruben A Mesa, Catriona Jamieson, Srdan Verstovsek, Jorge Cortes, Hagop Kantarjian, Gary D Gilliland, Ayalew Tefferi, Animesh Pardanani
    posted to no-tag by stoh55 on 2008-03-19 20:53:19 as **
  • Gene families: the taxonomy of protein paralogs and chimeras.
    Science, Vol. 278, No. 5338. (24 October 1997), pp. 609-614.
    by S Henikoff, EA Greene, S Pietrokovski, P Bork, TK Attwood, L Hood
    posted to chapter by ruvido on 2008-03-18 16:26:10 as ** along with 2 people and 1 group Einat svdate structural_bioinformatics
  • Recombination within natural populations of pathogenic bacteria: Short-term empirical estimates and long-term phylogenetic consequences
    PNAS, Vol. 98, No. 1. (2 January 2001), pp. 182-187.
    by Edward J Feil, Edward C Holmes, Debra E Bessen, Man-Suen Chan, Nicholas P Day, Mark C Enright, Richard Goldstein, Derek W Hood, Awdhesh Kalia, Catrin E Moore, Jiaji Zhou, Brian G Spratt
    posted to no-tag by mrthvzqz on 2008-03-17 02:14:22 as ** along with 3 people jmeppley vplagnol CharlesM
  • Coordination of metabolic plasticity in skeletal muscle
    J Exp Biol, Vol. 209, No. 12. (15 June 2006), pp. 2265-2275.
    by David A Hood, Isabella Irrcher, Vladimir Ljubicic, Anna-Maria Joseph
    posted to ampk b-adronergic calcium exercise human mitochondria mtdna by mjlaye on 2008-03-14 23:55:35 as read
  • Keys for Locks in Administrative Argument
    Administration Society, Vol. 25, No. 4. (1 February 1994), pp. 467-488.
    by Christopher Hood, Michael Jackson
    posted to npm-reform by pliscoff on 2008-03-12 23:51:25 as **
  • Complete Genome Sequence of Neisseria meningitidis Serogroup B Strain MC58
    Science, Vol. 287, No. 5459. (10 March 2000), pp. 1809-1815.
    by Hervé Tettelin, Nigel J Saunders, John Heidelberg, Alex C Jeffries, Karen E Nelson, Jonathan A Eisen, Karen A Ketchum, Derek W Hood, John F Peden, Robert J Dodson, William C Nelson, Michelle L Gwinn, Robert Deboy, Jeremy D Peterson, Erin K Hickey, Daniel H Haft, Steven L Salzberg, Owen White, Robert D Fleischmann, Brian A Dougherty, Tanya Mason, Anne Ciecko, Debbie S Parksey, Eric Blair, Henry Cittone, Emily B Clark, Matthew D Cotton, Terry R Utterback, Hoda Khouri, Haiying Qin, Jessica Vamathevan, John Gill, Vincenzo Scarlato, Vega Masignani, Mariagrazia Pizza, Guido Grandi, Li Sun, Hamilton O Smith, Claire M Fraser, Richard E Moxon, Rino Rappuoli, Craig J Venter
    posted to no-tag by karenidwilson on 2008-03-03 10:05:43 as **** along with 2 people and 1 group treangen tpreeprem gatech-compgenomics
  • Recent developments in anxiety disorders.
    Recent Patents CNS Drug Discov, Vol. 1, No. 3. (November 2006), pp. 289-298.
    by DM Christmas, SD Hood
    posted to no-tag by schmoutz on 2008-02-21 22:42:00 as **
  • Gene expression dynamics in the macrophage exhibit criticality
    Proceedings of the National Academy of Sciences, Vol. 105, No. 6. (12 February 2008), pp. 1897-1900.
    by Matti Nykter, Nathan D Price, Maximino Aldana, Stephen A Ramsey, Stuart A Kauffman, Leroy E Hood, Olli Yli-Harja, Ilya Shmulevich
    posted to adaptability criticality gene-expression robustness by margaritis on 2008-02-15 09:35:50 as ***
  • Whole-genome shotgun assembly and analysis of the genome of Fugu rubripes.
    Science, Vol. 297, No. 5585. (23 August 2002), pp. 1301-1310.
    by S Aparicio, J Chapman, E Stupka, N Putnam, JM Chia, P Dehal, A Christoffels, S Rash, S Hoon, A Smit, MD Gelpke, J Roach, T Oh, IY Ho, M Wong, C Detter, F Verhoef, P Predki, A Tay, S Lucas, P Richardson, SF Smith, MS Clark, YJ Edwards, N Doggett, A Zharkikh, SV Tavtigian, D Pruss, M Barnstead, C Evans, H Baden, J Powell, G Glusman, L Rowen, L Hood, YH Tan, G Elgar, T Hawkins, B Venkatesh, D Rokhsar, S Brenner
    posted to metagenomics_0208 by wenhan on 2008-02-14 19:13:18 as ** along with 1 person jermth
  • A molecular correlate to the Gleason grading system for prostate adenocarcinoma.
    Proc Natl Acad Sci U S A, Vol. 103, No. 29. (18 July 2006), pp. 10991-10996.
    by L True, I Coleman, S Hawley, CY Huang, D Gifford, R Coleman, TM Beer, E Gelmann, M Datta, E Mostaghel, B Knudsen, P Lange, R Vessella, D Lin, L Hood, PS Nelson
    posted to microarray prostate by minostro on 2008-02-08 00:47:00 as **
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