Group: EBI-regulation - library 222 articles Export

	Global landscape of protein complexes in the yeast Saccharomyces cerevisiae [My Copy] Nature, Vol. 440, No. 7084. (22 March 2006), pp. 637-643. by Nevan J. Krogan, Gerard Cagney, Haiyuan Yu, et al.Gouqing Zhong, Xinghua Guo, Alexandr Ignatchenko, Joyce Li, Shuye Pu, Nira Datta, Aaron P. Tikuisis, Thanuja Punna, JosÃ© M. PeregrÃn-Alvarez, Michael Shales, Xin Zhang, Michael Davey, Mark D. Robinson, Alberto Paccanaro, James E. Bray, Anthony Sheung, Bryan Beattie, Dawn P. Richards, Veronica Canadien, Atanas Lalev, Frank Mena, Peter Wong, Andrei Starostine, Myra M. Canete, James Vlasblom, Samuel Wu, Chris Orsi, Sean R. Collins, Shamanta Chandran, Robin Haw, Jennifer J. Rilstone, Kiran Gandi, Natalie J. Thompson, Gabe Musso, Peter St Onge, Shaun Ghanny, Mandy H. Y. Lam, Gareth Butland, Amin M. Altaf-Ul, Shigehiko Kanaya, Ali Shilatifard, Erin O'Shea, Jonathan S. Weissman, C. James Ingles, Timothy R. Hughes, John Parkinson, Mark Gerstein, Shoshana J. Wodak, Andrew Emili, Jack F. Greenblatt posted to interaction protein yeast by nickluscombe to the group EBI-regulation on 2006-04-02 20:08:46 as along with 29 people and 4 groups mpotamias paccanarolab ajbattle mgomes jxl bicko cerca jiny Borelli lfriedl chad_davis balajis marcius tardigrade nirfriedman balabu j3xucite koller raiyar cjeans nicoleq Evangelia csaveanu frohike carlk hplatero chasmand mapplab ethkim Paccanaro Lab kdl BioinfoCIPF SGU-CIPF
	MOLECULAR BIOLOGY: Managing Associations Between Different Chromosomes [My Copy] Science, Vol. 312, No. 5771. (14 April 2006), pp. 207-208. by Charalampos G. Spilianakis, Richard A. Flavell posted to expression regulation by nickluscombe to the group EBI-regulation on 2006-04-13 23:49:32 as
	BGEM: An In Situ Hybridization Database of Gene Expression in the Embryonic and Adult Mouse Nervous System. [My Copy] PLoS Biol, Vol. 4, No. 4. (April 2006) by S. Magdaleno, P. Jensen, C. L. Brumwell, et al.A. Seal, K. Lehman, A. Asbury, T. Cheung, T. Cornelius, D. M. Batten, C. Eden, S. M. Norland, D. S. Rice, N. Dosooye, S. Shakya, P. Mehta, T. Curran posted to development expression mammals by nickluscombe to the group EBI-regulation on 2006-04-11 20:41:27 as
	Regulating quiescence: new insights into hematopoietic stem cell biology. [My Copy] Dev Cell, Vol. 10, No. 4. (April 2006), pp. 415-417. by E. Passegué, A. J. Wagers posted to cells regulation stem by nickluscombe to the group EBI-regulation on 2006-04-05 21:40:12 as
	Spatial complexity of mechanisms controlling a bacterial cell cycle. [My Copy] Curr Opin Microbiol, Vol. 7, No. 6. (December 2004), pp. 572-578. by P. H. Viollier, L. Shapiro posted to no-tag by nickluscombe to the group EBI-regulation on 2006-04-05 00:28:46 as
	Global analysis of protein phosphorylation in yeast [My Copy] Nature, Vol. 438, No. 7068., pp. 679-684. by Jason Ptacek, Geeta Devgan, Gregory Michaud, et al.Heng Zhu, Xiaowei Zhu, Joseph Fasolo, Hong Guo, Ghil Jona, Ashton Breitkreutz, Richelle Sopko, Rhonda R. Mccartney, Martin C. Schmidt, Najma Rachidi, Soo-Jung Lee, Angie S. Mah, Lihao Meng, Michael J. R. Stark, David F. Stern, Claudio De Virgilio, Mike Tyers, Brenda Andrews, Mark Gerstein, Barry Schweitzer, Paul F. Predki, Michael Snyder posted to phosphoralome yeast by nickluscombe to the group EBI-regulation on 2006-04-04 10:51:00 as along with 11 people rsaito nedwards coela nzm MarcJungbluth tmmurali tuck balabu koller carlk neils
	Conservation of RET Regulatory Function from Human to Zebrafish Without Sequence Similarity. [My Copy] Science (23 March 2006) by Shannon Fisher, Elizabeth A A. Grice, Ryan M M. Vinton, Seneca L L. Bessling, Andrew S S. McCallion posted to evolution regulation by nickluscombe to the group EBI-regulation on 2006-04-13 23:52:06 as along with 5 people and 2 groups aprasad adepace maximilianh cisevol emptyhb EisenLab cis-regulatory-evolution
	Systematic interpretation of genetic interactions using protein networks [My Copy] Nat Biotech, Vol. 23, No. 5. (05 May 2005), pp. 561-566. by Ryan Kelley, Trey Ideker posted to metabolism synthetic-lethal yeast by nickluscombe to the group EBI-regulation on 2006-04-12 09:19:00 as along with 21 people and 1 group colmryan nzm dakelley chasmand ajbattle mtaschuk benjaminsb lptolik nedwards okarsligil tuck balajis wnpx nirfriedman mmt koller massivemayhem patrycjam patrycja_missiuro mingzhi carlk Bioinformatics
	A hidden metabolic pathway exposed. [My Copy] Proc Natl Acad Sci U S A (4 April 2006) by Andrei Osterman posted to bacteria ecoli metabolism by nickluscombe to the group EBI-regulation on 2006-04-11 20:32:28 as along with 2 people tny aswin
	Building a multicellular organism. [My Copy] Annu Rev Genet, Vol. 35 (2001), pp. 103-123. by D. Kaiser posted to bacteria multicellularity by nickluscombe to the group EBI-regulation on 2006-04-11 15:40:31 as along with 3 people balicea aswin stajich
	Thinking about bacterial populations as multicellular organisms. [My Copy] Annu Rev Microbiol, Vol. 52 (1998), pp. 81-104. by J. A. Shapiro posted to bacteria multicellularity by nickluscombe to the group EBI-regulation on 2006-04-10 14:57:23 as
	Chromosome-wide gene-specific targeting of the Drosophila dosage compensation complex. [My Copy] Genes Dev (17 March 2006) by Gregor D D. Gilfillan, Tobias Straub, Elzo de Wit, et al.Frauke Greil, Rosemarie Lamm, Bas van Steensel, Peter B B. Becker posted to compensation dosage fly x-chromosome by nickluscombe to the group EBI-regulation on 2006-04-06 11:40:23 as along with 1 person stonebas
	High-resolution ChIP-chip analysis reveals that the Drosophila MSL complex selectively identifies active genes on the male X chromosome. [My Copy] Genes Dev (17 March 2006) by Artyom A A. Alekseyenko, Erica Larschan, Weil R R. Lai, Peter J J. Park, Mitzi I I. Kuroda posted to compensation dosage fly x-chromosome by nickluscombe to the group EBI-regulation on 2006-04-06 11:38:59 as along with 1 person eukfn
	X-chromosome-wide profiling of MSL-1 distribution and dosage compensation in Drosophila. [My Copy] Genes Dev (17 March 2006) by Gaëlle Legube, Shannon K K. McWeeney, Martin J J. Lercher, Asifa Akhtar posted to compensation dosage fly x-chromosome by nickluscombe to the group EBI-regulation on 2006-04-06 11:30:19 as
	Nuclear pore components are involved in the transcriptional regulation of dosage compensation in Drosophila. [My Copy] Mol Cell, Vol. 21, No. 6. (17 March 2006), pp. 811-823. by S. Mendjan, M. Taipale, J. Kind, et al.H. Holz, P. Gebhardt, M. Schelder, M. Vermeulen, A. Buscaino, K. Duncan, J. Mueller, M. Wilm, H. G. Stunnenberg, H. Saumweber, A. Akhtar posted to compensation dosage fly x-chromosome by nickluscombe to the group EBI-regulation on 2006-04-06 11:29:54 as
	Similar gene expression profiles do not imply similar tissue functions. [My Copy] Trends Genet, Vol. 22, No. 3. (March 2006), pp. 132-138. by I. Yanai, J. O. Korbel, S. Boue, S. K. McWeeney, P. Bork, M. J. Lercher posted to expression mammals by nickluscombe to the group EBI-regulation on 2006-04-04 20:07:51 as along with 1 person cjeans
	Gene expression patterns in human placenta. [My Copy] Proc Natl Acad Sci U S A (27 March 2006) by Ruchira Sood, James L L. Zehnder, Maurice L L. Druzin, Patrick O O. Brown posted to expression human by nickluscombe to the group EBI-regulation on 2006-04-04 19:58:09 as
	E-mail decay rates among corresponding authors in MEDLINE. [My Copy] EMBO reports, Vol. 7, No. 2. (February 2006), pp. 122-127. by J. D. Wren, J. E. Grissom, T. Conway posted to no-tag by nickluscombe to the group EBI-regulation on 2006-04-03 21:04:23 as along with 3 people druvus daforerog hpiwowar
	Functional classification of drugs by properties of their pairwise interactions [My Copy] Nature Genetics, Vol. 38, No. 4. (19 March 2006), pp. 489-494. by Pamela Yeh, Ariane I. Tschumi, Roy Kishony posted to bacteria drugs by nickluscombe to the group EBI-regulation on 2006-04-03 14:38:59 as along with 4 people and 1 group dlobo lingchong nirfriedman madhadron GEB
	A genomic perspective on plant transcription factors. [My Copy] Curr Opin Plant Biol, Vol. 3, No. 5. (October 2000), pp. 423-434. by J. L. Riechmann, O. J. Ratcliffe posted to arabidopsis regulation transcription by nickluscombe to the group EBI-regulation on 2006-04-02 19:18:03 as
	Distinct class of putative ânon-conservedâ promoters in humans: Comparative studies of alternative promoters of human and mouse genes [My Copy] Genome Research, Vol. 17, No. 7. (1 July 2007), pp. 1005-1014. by Katsuki Tsuritani, Takuma Irie, Riu Yamashita, et al.Yuta Sakakibara, Hiroyuki Wakaguri, Akinori Kanai, Junko Mizushima-Sugano, Sumio Sugano, Kenta Nakai, Yutaka Suzuki posted to promoters mammals by nickluscombe to the group EBI-regulation on 2007-07-03 12:46:58 as along with 7 people and 1 group maximilianh djkt cabbagezs toshiaki_katayama kmdaily antonkratz cisevol cis-regulatory-evolution
	A novel view of the transcriptome revealed from gene trapping in mouse embryonic stem cells [My Copy] Genome Res., Vol. 17, No. 7. (1 July 2007), pp. 1051-1060. by Guglielmo Roma, Gilda Cobellis, Pamela Claudiani, et al.Francesco Maione, Pedro Cruz, Gaetano Tripoli, Marco Sardiello, Ivana Peluso, Elia Stupka posted to stem expression by nickluscombe to the group EBI-regulation on 2007-07-03 12:46:13 as along with 1 person hplatero
	Microbial genome data resources [My Copy] Current Opinion in Biotechnology In Energy biotechnology / Environmental biotechnology, Vol. 18, No. 3. (June 2007), pp. 267-272. by Victor M. Markowitz posted to bacteria by nickluscombe to the group EBI-regulation on 2007-07-03 12:36:49 as
	Systematic Discovery of In Vivo Phosphorylation Networks [My Copy] Cell, Vol. 129, No. 7. (29 June 2007), pp. 1415-1426. by Rune Linding, Lars J. Jensen, Gerard J. Ostheimer, et al.Marcel A. van Vugt, Claus Jorgensen, Ioana M. Miron, Francesca Diella, Karen Colwill, Lorne Taylor, Kelly Elder, Pavel Metalnikov, Vivian Nguyen, Adrian Pasculescu, Jing Jin, Jin G. Park, Leona D. Samson, James R. Woodgett, Robert B. Russell, Peer Bork, Michael B. Yaffe, Tony Pawson posted to no-tag by nickluscombe to the group EBI-regulation on 2007-07-03 12:33:40 as
	Genetic reconstruction of a functional transcriptional regulatory network. [My Copy] Nat Genet (8 April 2007) by Zhanzhi Hu, Patrick J J. Killion, Vishwanath R R. Iyer posted to yeast tf expression by nickluscombe to the group EBI-regulation on 2007-06-13 09:45:15 as along with 15 people and 5 groups sergiun TheresaNiederberger akraemer behindtherabbit ptrobajo dpollard xico zwang lizabeth dejori xingxu naegele czeller mapplab siebert Bioinformatics EisenLab WetBiology ic4 generif_paper
	Network activity-independent coordinated gene expression program for synapse assembly. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 104, No. 11. (13 March 2007), pp. 4658-4663. by L. M. Valor, P. Charlesworth, L. Humphreys, C. N. Anderson, S. G. Grant posted to expression brain by nickluscombe to the group EBI-regulation on 2007-06-11 09:08:34 as along with 1 person daforerog
	Probing Transcription Factor Dynamics at the Single-Molecule Level in a Living Cell [My Copy] Science, Vol. 316, No. 5828. (25 May 2007), pp. 1191-1194. by Johan Elf, Gene-Wei Li, X. Sunney Xie posted to no-tag by nickluscombe to the group EBI-regulation on 2007-05-29 07:57:04 as along with 8 people and 2 groups OliverHarriman jjray dpollard madhadron balabu samjlord austin ras EisenLab moernerlab
	Deregulated homeobox gene expression in cancer: cause or consequence? [My Copy] Nat Rev Cancer, Vol. 2, No. 10. (October 2002), pp. 777-785. by C. Abate-Shen posted to tf by nickluscombe to the group EBI-regulation on 2007-05-23 13:02:40 as
	The genesis and evolution of homeobox gene clusters [My Copy] Nature Reviews Genetics, Vol. 6, No. 12. (10 November 2005), pp. 881-892. by Jordi Garcia-Fernàndez posted to tf by nickluscombe to the group EBI-regulation on 2007-05-23 13:01:51 as along with 7 people and 1 group brant balicea emilyhare BioMaxi timflutre blobbybirdman blackm0k EisenLab
	Transcription factors: the right combination for the DNA lock. [My Copy] Curr Biol, Vol. 9, No. 12. (17 June 1999) by S. Khorasanizadeh, F. Rastinejad posted to tf by nickluscombe to the group EBI-regulation on 2007-05-23 13:00:54 as
	Homeodomain revisited: a lesson from disease-causing mutations. [My Copy] Hum Genet, Vol. 116, No. 6. (May 2005), pp. 433-444. by Y. I. Chi posted to tf by nickluscombe to the group EBI-regulation on 2007-05-23 12:59:31 as
	LIM-homeodomain genes in mammalian development and human disease. [My Copy] Mol Biol Rep, Vol. 32, No. 2. (June 2005), pp. 67-77. by C. S. Hunter, S. J. Rhodes posted to tf by nickluscombe to the group EBI-regulation on 2007-05-23 12:58:08 as
	Homeodomain interactions. [My Copy] Curr Opin Struct Biol, Vol. 6, No. 1. (February 1996), pp. 62-68. by C. Wolberger posted to tf by nickluscombe to the group EBI-regulation on 2007-05-23 12:45:40 as
	Combinatorial transcription factors. [My Copy] Curr Opin Genet Dev, Vol. 8, No. 5. (October 1998), pp. 552-559. by C. Wolberger posted to tf by nickluscombe to the group EBI-regulation on 2007-05-23 12:44:09 as
	Multiprotein-DNA complexes in transcriptional regulation. [My Copy] Annu Rev Biophys Biomol Struct, Vol. 28 (1999), pp. 29-56. by C. Wolberger posted to tf by nickluscombe to the group EBI-regulation on 2007-05-23 12:43:00 as along with 1 person and 2 groups barry structural_bioinformatics Bioinformatics
	The T-box family [My Copy] Genome Biology, Vol. 3, No. 6. (2002), pp. reviews3008.1-reviews3008.7. by Val Wilson, Frank Conlon posted to tf by nickluscombe to the group EBI-regulation on 2007-05-23 12:41:09 as
	KRAB-containing zinc-finger repressor proteins [My Copy] Genome Biology, Vol. 4, No. 10. (2003) by Raul Urrutia posted to tf by nickluscombe to the group EBI-regulation on 2007-05-23 12:40:23 as
	The AP-2 family of transcription factors. [My Copy] Genome Biol, Vol. 6, No. 13. (2005) by D. Eckert, S. Buhl, S. Weber, R. Jäger, H. Schorle posted to tf by nickluscombe to the group EBI-regulation on 2007-05-23 12:39:26 as
	Transcriptional activation by recruitment. [My Copy] Nature, Vol. 386, No. 6625. (10 April 1997), pp. 569-577. by M. Ptashne, A. Gann posted to tf by nickluscombe to the group EBI-regulation on 2007-05-23 12:29:19 as
	Yeast transcriptional regulatory mechanisms. [My Copy] Annu Rev Genet, Vol. 29 (1995), pp. 651-674. by K. Struhl posted to yeast tf by nickluscombe to the group EBI-regulation on 2007-05-23 12:28:53 as
	The Evolution of Transcriptional Regulation in Eukaryotes [My Copy] Mol Biol Evol, Vol. 20, No. 9. (1 September 2003), pp. 1377-1419. by Gregory A. Wray, Matthew W. Hahn, Ehab Abouheif, et al.James P. Balhoff, Margaret Pizer, Matthew V. Rockman, Laura A. Romano posted to tf evolution by nickluscombe to the group EBI-regulation on 2007-05-23 12:27:04 as along with 11 people and 4 groups athma provero wrowell ana dpollard adepace anatiferous mimulus_99 cisevol emptyhb emmahe structural_bioinformatics Bioinformatics EisenLab cis-regulatory-evolution
	Helix-Loop-Helix Proteins: Regulators of Transcription in Eucaryotic Organisms [My Copy] Mol. Cell. Biol., Vol. 20, No. 2. (15 January 2000), pp. 429-440. by Mark E. Massari, Cornelis Murre posted to tf by nickluscombe to the group EBI-regulation on 2007-05-23 12:25:52 as along with 5 people Biomedyknight guhjy tuck balicea heliopais
	Recognition of specific DNA sequences. [My Copy] Mol Cell, Vol. 8, No. 5. (November 2001), pp. 937-946. by C. W. Garvie, C. Wolberger posted to tf by nickluscombe to the group EBI-regulation on 2007-05-23 12:24:41 as
	An overview of the basic helix-loop-helix proteins. [My Copy] Genome Biol, Vol. 5, No. 6. (2004) by S. Jones posted to tf by nickluscombe to the group EBI-regulation on 2007-05-23 12:23:33 as along with 1 person guhjy
	Coding limits on the number of transcription factors [My Copy] BMC Genomics, Vol. 7 (19 September 2006), 239. by Shalev Itzkovitz, Tsvi Tlusty, Uri Alon posted to no-tag by nickluscombe to the group EBI-regulation on 2007-05-23 12:15:20 as along with 1 person and 1 group brant EisenLab
	Modelling Transcriptional Interference and DNA Looping in Gene Regulation. [My Copy] J Mol Biol (20 April 2007) by Ian B B. Dodd, Keith E E. Shearwin, Kim Sneppen posted to modelling by nickluscombe to the group EBI-regulation on 2007-05-18 09:19:02 as
	The Increasing Dominance of Teams in Production of Knowledge [My Copy] Science, Vol. 316, No. 5827. (18 May 2007), pp. 1036-1039. by Stefan Wuchty, Benjamin F. Jones, Brian Uzzi posted to social by nickluscombe to the group EBI-regulation on 2007-05-18 09:00:39 as along with 10 people and 2 groups Effie hughesro dartar thor_bjarnason hpiwowar cmmorel dullhunk MariaChiaraP franzkurfess fisherp NaCTeM Parenting 2.0
	The genome of the kinetoplastid parasite, Leishmania major. [My Copy] Science, Vol. 309, No. 5733. (15 July 2005), pp. 436-442. by A. C. Ivens, C. S. Peacock, E. A. Worthey, et al.L. Murphy, G. Aggarwal, M. Berriman, E. Sisk, M. A. Rajandream, E. Adlem, R. Aert, A. Anupama, Z. Apostolou, P. Attipoe, N. Bason, C. Bauser, A. Beck, S. M. Beverley, G. Bianchettin, K. Borzym, G. Bothe, C. V. Bruschi, M. Collins, E. Cadag, L. Ciarloni, C. Clayton, R. M. Coulson, A. Cronin, A. K. Cruz, R. M. Davies, J. De Gaudenzi, D. E. Dobson, A. Duesterhoeft, G. Fazelina, N. Fosker, A. C. Frasch, A. Fraser, M. Fuchs, C. Gabel, A. Goble, A. Goffeau, D. Harris, C. Hertz-Fowler, H. Hilbert, D. Horn, Y. Huang, S. Klages, A. Knights, M. Kube, N. Larke, L. Litvin, A. Lord, T. Louie, M. Marra, D. Masuy, K. Matthews, S. Michaeli, J. C. Mottram, S. Müller-Auer, H. Munden, S. Nelson, H. Norbertczak, K. Oliver, S. O'neil, M. Pentony, T. M. Pohl, C. Price, B. Purnelle, M. A. Quail, E. Rabbinowitsch, R. Reinhardt, M. Rieger, J. Rinta, J. Robben, L. Robertson, J. C. Ruiz, S. Rutter, D. Saunders, M. Schäfer, J. Schein, D. C. Schwartz, K. Seeger, A. Seyler, S. Sharp, H. Shin, D. Sivam, R. Squares, S. Squares, V. Tosato, C. Vogt, G. Volckaert, R. Wambutt, T. Warren, H. Wedler, J. Woodward, S. Zhou, W. Zimmermann, D. F. Smith, J. M. Blackwell, K. D. Stuart, B. Barrell, P. J. Myler posted to no-tag by nickluscombe to the group EBI-regulation on 2007-05-09 12:29:58 as along with 1 person mariakmejia
	Refinement and expansion of signaling pathways: the osmotic response network in yeast. [My Copy] Genome Res, Vol. 17, No. 3. (March 2007), pp. 358-367. by I. Gat-Viks, R. Shamir posted to yeast transcription by nickluscombe to the group EBI-regulation on 2007-04-30 10:45:20 as along with 2 people dragonrez roys
	Conservation of Regional Gene Expression in Mouse and Human Brain [My Copy] PLoS Genet, Vol. 3, No. 4. (20 April 2007), e59. by Andrew D. Strand, Aaron K. Aragaki, Zachary C. Baquet, et al.Angela Hodges, Philip Cunningham, Peter Holmans, Kevin R. Jones, Lesley Jones, Charles Kooperberg, James M. Olson posted to expression conservation brain by nickluscombe to the group EBI-regulation on 2007-04-23 19:22:36 as along with 9 people manduca daforerog jeremymiller Iden-J_GluR cjeans ghattem suizan ppark klo

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yeast	40
regulation	33
expression	30
transcription	28
tf	22
bacteria	19
evolution	16
ecoli	12
mammals	12
network	9
protein-protein	9
chip-chip	7
fly	6
compensation	5
dosage	5
human	5
metabolism	5
predictions	5
synthetic-lethal	5
x-chromosome	5
essentiality	4
tfbs	4
arabidopsis	3
database	3
modelling	3
primates	3
advice	2
back-up	2
bayesian	2
biofilm	2
brain	2
cancer	2
cell-cycle	2
development	2
eukaryotes	2
general	2
metagenomics	2
multicellularity	2
networks	2
protein	2
stem	2
adaptation	1
cage	1
cells	1
clustering	1
conservation	1
differentiation	1
drugs	1
dynamics	1
e	1
est	1
feedback	1
footprinting	1
graphical-models	1
interaction	1
introns	1
kinases	1
methods	1
microarray	1
nanotech	1
nuclear	1
phenotype	1
phosphoralome	1
promoters	1
proteomics	1
proteus	1
qtl	1
quorum	1
rna	1
signalling	1
social	1
sysbiol	1
tiling	1

Group: EBI-regulation - library 222 articles Export

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