Group: EBI-regulation - with tag transcription [28 articles] Export

Recent papers posted by members of the EBI-regulation group with tag transcription

	Refinement and expansion of signaling pathways: the osmotic response network in yeast. [My Copy] Genome Res, Vol. 17, No. 3. (March 2007), pp. 358-367. by I. Gat-Viks, R. Shamir posted to yeast transcription by nickluscombe to the group EBI-regulation on 2007-04-30 10:45:20 as along with 2 people dragonrez roys
	The Regulatory Code for Transcriptional Response Diversity and Its Relation to Genome Structural Properties in A. thaliana [My Copy] PLoS Genetics, Vol. 3, No. 2. (1 February 2007), e11. by Dirk Walther, Roman Brunnemann, Joachim Selbig posted to arabidopsis regulation transcription by nickluscombe to the group EBI-regulation on 2007-02-26 09:52:22 as
	Epigenetic Control of the foxp3 Locus in Regulatory T Cells [My Copy] PLoS Biology, Vol. 5, No. 2. (1 February 2007), e38. by Stefan Floess, Jennifer Freyer, Christiane Siewert, et al.Udo Baron, Sven Olek, Julia Polansky, Kerstin Schlawe, Hyun-Dong Chang, Tobias Bopp, Edgar Schmitt, Stefan Klein-Hessling, Edgar Serfling, Alf Hamann, Jochen Huehn posted to transcription tf regulation mammals by nickluscombe to the group EBI-regulation on 2007-01-31 15:47:41 as
	Transcriptional regulation of protein complexes within and across species. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 104, No. 4. (23 January 2007), pp. 1283-1288. by K. Tan, T. Shlomi, H. Feizi, T. Ideker, R. Sharan posted to transcription regulation protein-protein evolution by nickluscombe to the group EBI-regulation on 2007-01-24 04:30:09 as along with 6 people and 1 group HawkinsJohnC kaarsinogen icases zwang dylan77 carlk TNT
	Large-Scale Turnover of Functional Transcription Factor Binding Sites in <italic>Drosophila</italic> [My Copy] PLoS Comput Biol, Vol. 2, No. 10. (13 October 2006), e130. by Alan M. Moses, Daniel A. Pollard, David A. Nix, et al.Venky N. Iyer, Xiao-Yong Li, Mark D. Biggin, Michael B. Eisen posted to evolution fly transcription by nickluscombe to the group EBI-regulation on 2006-10-27 10:51:26 as along with 3 people gdb daveGerrard nuin
	Transcriptional coactivator complexes. [My Copy] Annu Rev Biochem, Vol. 70 (2001), pp. 475-501. by A. M. Näär, B. D. Lemon, R. Tjian posted to transcription by nickluscombe to the group EBI-regulation on 2006-07-31 15:10:33 as along with 1 person lusk
	Close sequence comparisons are sufficient to identify human cis-regulatory elements. [My Copy] Genome Res (12 June 2006) by Shyam Prabhakar, Francis Poulin, Malak Shoukry, et al.Veena Afzal, Edward M M. Rubin, Olivier Couronne, Len A A. Pennacchio posted to footprinting mammals tfbs transcription by nickluscombe to the group EBI-regulation on 2006-07-04 15:25:52 as along with 8 people and 1 group indigoviolet dpollard samal olympos emptyhb bpcusack mariakmejia kcrawlik EisenLab
	REDUCE: An online tool for inferring cis-regulatory elements and transcriptional module activities from microarray data. [My Copy] Nucleic Acids Res, Vol. 31, No. 13. (1 July 2003), pp. 3487-3490. by C. Roven, H. J. Bussemaker posted to expression transcription by nickluscombe to the group EBI-regulation on 2006-06-29 14:53:54 as along with 4 people askrajiv dquest heliopais mariakmejia
	Defining transcriptional networks through integrative modeling of mRNA expression and transcription factor binding data [My Copy] BMC Bioinformatics, Vol. 5, No. 1. (18 March 2004), 31. by Feng Gao, Barrett Foat, Harmen Bussemaker posted to chip-chip expression transcription by nickluscombe to the group EBI-regulation on 2006-06-29 14:50:29 as along with 9 people antonkratz lusk tmmurali tuck gpalidwor koller Ao_Li2007 mariakmejia tvdbulck
	An ORFeome-based analysis of human transcription factor genes and the construction of a microarray to interrogate their expression. [My Copy] Genome Res, Vol. 14, No. 10B. (October 2004), pp. 2041-2047. by D. N. Messina, J. Glasscock, W. Gish, M. Lovett posted to mammals transcription by nickluscombe to the group EBI-regulation on 2006-06-26 16:44:12 as along with 4 people isimpson tabu ale mariakmejia
	Genome-wide analysis of mammalian promoter architecture and evolution. [My Copy] Nature genetics, Vol. 38, No. 6. (28 June 2006), pp. 626-635. by Piero Carninci, Albin Sandelin, Boris Lenhard, et al.Shintaro Katayama, Kazuro Shimokawa, Jasmina Ponjavic, Colin A. Semple, Martin S. Taylor, Pär G. Engström, Martin C. Frith, Alistair R. Forrest, Wynand B. Alkema, Sin Lam L. Tan, Charles Plessy, Rimantas Kodzius, Timothy Ravasi, Takeya Kasukawa, Shiro Fukuda, Mutsumi Kanamori-Katayama, Yayoi Kitazume, Hideya Kawaji, Chikatoshi Kai, Mari Nakamura, Hideaki Konno, Kenji Nakano, Salim Mottagui-Tabar, Peter Arner, Alessandra Chesi, Stefano Gustincich, Francesca Persichetti, Harukazu Suzuki, Sean M. Grimmond, Christine A. Wells, Valerio Orlando, Claes Wahlestedt, Edison T. Liu, Matthias Harbers, Jun Kawai, Vladimir B. Bajic, David A. Hume, Yoshihide Hayashizaki posted to cage mammals transcription by nickluscombe to the group EBI-regulation on 2006-06-26 12:22:43 as along with 19 people and 3 groups rsaito guhjy antonkratz athma inesdesantiago rpatward hagechouchin443 nklee djkt jfr xwbcn dchughes tabu samal xiaobeizhao cisevol eviledv gjuggler jasonflannick G4ID Genetics-of-Gambling cis-regulatory-evolution
	Linking DNA-binding proteins to their recognition sequences by using protein microarrays. [My Copy] Proc Natl Acad Sci U S A (19 June 2006) by Su-Wen W. Ho, Ghil Jona, Christina T L T. Chen, Mark Johnston, Michael Snyder posted to transcription by nickluscombe to the group EBI-regulation on 2006-06-26 12:14:27 as along with 4 people and 2 groups emilyhare samal kengg koller EisenLab Plantandetc
	Systematic discovery of regulatory motifs in human promoters and 3[prime] UTRs by comparison of several mammals [My Copy] Nature, Vol. aop, No. current. (27 February 2005) by Xiaohui Xie, Jun Lu, E. J. Kulbokas, et al.Todd R. Golub, Vamsi Mootha, Kerstin Lindblad-Toh, Eric S. Lander, Manolis Kellis posted to mammals regulation transcription by nickluscombe to the group EBI-regulation on 2006-06-12 16:03:09 as along with 28 people and 3 groups Dulce wowalz maximilianh_otx hagechouchin443 sterovetta kieran101 snuppepuppan BioGeek briann jtextori tmmurali okarsligil jfr balajis lyongu eckart_bindewald mtagaya adepace fisherp panetebrother smiddha franklin oscarluoinau heliopais ale emptyhb maralena mariakmejia Bioinformatics EisenLab microRNA
	Transcriptional regulatory code of a eukaryotic genome [My Copy] Nature, Vol. 431, No. 7004. (02 September 2004), pp. 99-104. by Christopher T. Harbison, D. Benjamin Gordon, Tong I. Lee, et al.Nicola J. Rinaldi, Kenzie D. Macisaac, Timothy W. Danford, Nancy M. Hannett, Jean-Bosco Tagne, David B. Reynolds, Jane Yoo, Ezra G. Jennings, Julia Zeitlinger, Dmitry K. Pokholok, Manolis Kellis, P. Alex Rolfe, Ken T. Takusagawa, Eric S. Lander, David K. Gifford, Ernest Fraenkel, Richard A. Young posted to chip-chip transcription yeast by nickluscombe to the group EBI-regulation on 2006-05-22 15:26:54 as along with 29 people and 7 groups viren4388 daveGerrard Dulce talponer wowalz siebert alokm tuck lyongu kaspermunch dpollard balicea kt dchughes nirfriedman cmm kengg gespim koller lusk nklee cisevol njcitulike xili03 brant mariakmejia kristallreiner snow_dragon aalibes Bioinformatics EisenLab FAB-lab G4ID Plantandetc Genetics-of-Gambling BergmanLab
	DBD: a transcription factor prediction database. [My Copy] Nucleic Acids Res, Vol. 34, No. Database issue. (1 January 2006) by S. K. Kummerfeld, S. A. Teichmann posted to transcription by nickluscombe to the group EBI-regulation on 2006-05-10 15:00:50 as along with 6 people isimpson troels_marstrand gpalidwor nklee mariakmejia natstreet
	The repertoire of DNA-binding transcriptional regulators in Escherichia coli K-12. [My Copy] Nucleic Acids Res, Vol. 28, No. 8. (15 April 2000), pp. 1838-1847. by E. Pérez-Rueda, J. Collado-Vides posted to ecoli transcription by nickluscombe to the group EBI-regulation on 2006-05-10 14:52:23 as along with 2 people Winzer discreteonyxorb
	RegulonDB (version 4.0): transcriptional regulation, operon organization and growth conditions in Escherichia coli K-12. [My Copy] Nucleic Acids Res, Vol. 32, No. Database issue. (1 January 2004) by H. Salgado, S. Gama-Castro, A. Martínez-Antonio, et al.E. Díaz-Peredo, F. Sánchez-Solano, M. Peralta-Gil, D. Garcia-Alonso, V. Jiménez-Jacinto, A. Santos-Zavaleta, C. Bonavides-Martínez, J. Collado-Vides posted to ecoli transcription by nickluscombe to the group EBI-regulation on 2006-05-10 14:49:21 as along with 1 person dquest
	Deciphering principles of transcription regulation in eukaryotic genomes [My Copy] Molecular Systems Biology by Dat H. Nguyen, Patrik D'Haeseleer posted to eukaryotes regulation transcription by nickluscombe to the group EBI-regulation on 2006-05-04 13:02:18 as
	Evolutionary expansion and divergence in the ZNF91 subfamily of primate-specific zinc finger genes. [My Copy] Genome Res, Vol. 16, No. 5. (May 2006), pp. 584-594. by A. T. Hamilton, S. Huntley, M. Tran-Gyamfi, D. M. Baggott, L. Gordon, L. Stubbs posted to human transcription by nickluscombe to the group EBI-regulation on 2006-05-04 12:58:17 as
	The expanding transcriptome: the genome as the 'Book of Sand' [My Copy] The EMBO Journal, Vol. aop, No. current. (02 March 2006) by Luis, Juan Valcarcel posted to eukaryotes expression regulation transcription by nickluscombe to the group EBI-regulation on 2006-05-03 12:03:12 as along with 4 people balajis JeffR100 farhat heliopais
	Target hub proteins serve as master regulators of development in yeast. [My Copy] Genes Dev, Vol. 20, No. 4. (15 February 2006), pp. 435-448. by A. R. Borneman, J. A. Leigh-Bell, H. Yu, P. Bertone, M. Gerstein, M. Snyder posted to chip-chip regulation transcription yeast by nickluscombe to the group EBI-regulation on 2006-04-11 16:16:49 as along with 3 people aswin koller carlk
	The cell cycle-regulated genes of Schizosaccharomyces pombe. [My Copy] PLoS Biol, Vol. 3, No. 7. (July 2005) by A. Oliva, A. Rosebrock, F. Ferrezuelo, et al.S. Pyne, H. Chen, S. Skiena, B. Futcher, J. Leatherwood posted to expression regulation transcription yeast by nickluscombe to the group EBI-regulation on 2006-04-06 12:52:27 as
	Genome-wide oscillation of transcription in yeast. [My Copy] Trends Biochem Sci (22 February 2006) by Hans Reinke, David Gatfield posted to regulation transcription yeast by nickluscombe to the group EBI-regulation on 2006-04-06 12:52:02 as along with 2 people entropy Darko
	RegulonDB (version 5.0): Escherichia coli K-12 transcriptional regulatory network, operon organization, and growth conditions. [My Copy] Nucleic Acids Res, Vol. 34, No. Database issue. (1 January 2006) by H. Salgado, S. Gama-Castro, M. Peralta-Gil, et al.E. Díaz-Peredo, F. Sánchez-Solano, A. Santos-Zavaleta, I. Martínez-Flores, V. Jiménez-Jacinto, C. Bonavides-Martínez, J. Segura-Salazar, A. Martínez-Antonio, J. Collado-Vides posted to bacteria database regulation transcription by nickluscombe to the group EBI-regulation on 2006-04-04 14:17:54 as along with 1 person balajis
	Genomic analysis of gene expression relationships in transcriptional regulatory networks. [My Copy] Trends Genet, Vol. 19, No. 8. (August 2003), pp. 422-427. by H. Yu, N. M. Luscombe, J. Qian, M. Gerstein posted to regulation transcription yeast by nickluscombe to the group EBI-regulation on 2006-04-02 20:13:08 as along with 1 person karfunkel
	A genomic perspective on plant transcription factors. [My Copy] Curr Opin Plant Biol, Vol. 3, No. 5. (October 2000), pp. 423-434. by J. L. Riechmann, O. J. Ratcliffe posted to arabidopsis regulation transcription by nickluscombe to the group EBI-regulation on 2006-04-02 19:18:03 as
	Arabidopsis Transcription Factors: Genome-Wide Comparative Analysis Among Eukaryotes [My Copy] Science, Vol. 290, No. 5499. (15 December 2000), pp. 2105-2110. by J. L. Riechmann, J. Heard, G. Martin, et al.L. Reuber, -Z, Jiang, J. Keddie, L. Adam, O. Pineda, O. J. Ratcliffe, R. R. Samaha, R. Creelman, M. Pilgrim, P. Broun, J. Z. Zhang, D. Ghandehari, B. K. Sherman, -L posted to arabidopsis regulation transcription by nickluscombe to the group EBI-regulation on 2006-04-02 19:17:33 as along with 6 people and 1 group mlog megraw tny kengg Hummel hplatero Plantandetc
	Signal transduction and the control of gene expression. [My Copy] Science (New York, N.Y.), Vol. 295, No. 5556. (1 February 2002), pp. 813-818. by Ali H. Brivanlou, James E. Darnell posted to mammals regulation transcription by nickluscombe to the group EBI-regulation on 2006-04-02 19:09:01 as along with 4 people and 1 group agustinarce vertikalist aswin karfunkel BTS-PT-AS-CS

Note: You may cite this page as: http://www.citeulike.org/group/1032/tag/transcription

regulation	431
factor	224
review	194
network	167
yeast	165
chromatin	162
evolution	150
promoter	140
expression	132
drosophila	125
binding	107
gene	107
rna	106
for-the-review	95
biodegradation	90
elegans	83
nematode	80
celegans	79
c_elegans	78
caenorhabditis_elegans	78
wormbase	78
genomics	77
article	74
genome	73
polymerase	64
dna	62
motif	56
microarray	54
regulatory	54
epigenetics	52
cancer	51
microrna	51
networks	51
translation	49
human	48
bacteria	47
bioinformatics	47
elongation	47
histone	46
protein	46
transcriptome	46
prediction	45
cloned_genes	42
gene_regulation	42
mrna	42
transcriptional-regulation	42
factors	41
gene_expression	40
antisense	39
development	39
integration	37
initiation	35
methylation	35
genetics	33
noise	32
site	32
gene-expression	31
nucleosome	31
tfbs	31
conserved	30
trna	30
mouse	29
model	28
mirna	27
rnap	27
dna_sequence	26
activator	25
chromosomes	25
splicing	25
transcription_regulation	25
activation	24
biology	24
cell	24
analysis	23
mediator	23
ncrna	23
sequencing	23
cisreg	22
tf	22
transcription_factor	22
replication	21
sequence	21
breast	20
differentiation	20
genome-wide	20
mammals	20
receptor	20
remodeling	20
genetic	19
heat_shock	19
hematopoiesis	19
imprinting	19
mathematical_model	19
structure	19
combinatorial	18
enhancers	18
myc	18
nucleus	18
polii	18
termination	18

Group: EBI-regulation - with tag transcription [28 articles] Export

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