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	Tools and databases to analyze protein flexibility; approaches to mapping implied features onto sequences. [My Copy] Methods Enzymol, Vol. 374 (2003), pp. 544-584. by W. G. Krebs, J. Tsai, V. Alexandrov, J. Junker, R. Jansen, M. Gerstein posted to nma protein_structure structure_flexible web_server by ana to the group structural_bioinformatics on 2005-06-24 00:20:41 as along with 1 person and 1 group barry Bioinformatics
	Normal mode analysis of macromolecular motions in a database framework: developing mode concentration as a useful classifying statistic. [My Copy] Proteins, Vol. 48, No. 4. (1 September 2002), pp. 682-695. by W. G. Krebs, V. Alexandrov, C. A. Wilson, N. Echols, H. Yu, M. Gerstein posted to nma protein_structure structure_flexible by ana to the group structural_bioinformatics on 2005-05-25 23:41:22 as along with 5 people and 2 groups apaydin barry aqeel yongzhao martainn Bioinformatics TSRI_MGL
	Normal modes for predicting protein motions: a comprehensive database assessment and associated Web tool. [My Copy] Protein Sci, Vol. 14, No. 3. (March 2005), pp. 633-643. by V. Alexandrov, U. Lehnert, N. Echols, D. Milburn, D. Engelman, M. Gerstein posted to nma protein_structure structure_flexible web_server by ana to the group structural_bioinformatics on 2005-05-25 23:40:39 as along with 2 people and 1 group barry aqeel Bioinformatics

protein_structure	401
molecular_motors	173
kinesin	123
review	117
structure_comparison	116
protein_dynamics	105
protein_sequence	99
protein_evolution	78
md_simulation	64
protein_protein	63
bioinf_methods	61
protein_design	45
jcsg	42
cytoskeleton	41
sequence_comparison	39
structure_alignment	39
tubulin	38
new	37
protein_folding	36
nma	32
electrostatics	32
allosteric	32
myosin	31
interaction_hierarchy	29
comparative_genomics	29
snps	28
pca	27
dynein	26
structural_bioinformatics	26
ctbp	26
evolution	25
secondary-structure	25
virulence_factor	24
structure_prediction	24
structure_classification	23
eg5	23
split-barrel	21
docking	21
bd_simulation	20
function-prediction	20
disease-associated	20
structure_flexible	20
motor_model	20
contact_maps	19
protein_function	19
monastrol	18
folding	18
indels	17
streptococcus	16
clustering	16
hgt	16
project	16
structure	16
networks	16
drug_design	16
correlated_mutations	15
fold_space	15
protein_interaction	15
web_server	15
domain_motions	14
artificial_life	14
complex_systems	14
algorithms	14
stability	14
benchmark	14
kinases	14
collective_systems	13
minimal_genome	13
collective_intelligence	13
phylogeny	13
distributed_computing	13
protein	13
structural_genomics	13
active-site	13
stigmergy	13
swarm_intelligence	13
ant_colony_systems	13
protein_universe	13
collective_computing	13
adaptive_computation	13
self-organization	12
artificial_intelligence	12
scop-b-45-1-1	12
nmr	12
pattern_recognition	12
bioinformatics	12
structure_superposition	12
protein-stability	11
essential_genes	11
structure-analysis	11
malaria	11
protein_ligand	11
prediction	11
hbond	10
beta-strand	10
conservation	10
g_proteins	10
ras	10
molecular_mimicry	10
target_selection	10
genetic_algorithms	10
sequence_alignment	10
alpha-helix	9
protein-families	9
sequence_structure	9
genome_evolution	9
alphabeta	8
image_processing	8
homology_analogy	8
p-loop	8
ntpases	8
function_prediction	8
contacts	8
motifs	8
gotit	8
coarse_grain	8
core_structure	8
correlated_motions	8
comparative_modeling	8
comparative_model	7
image_analysis	7
structure-based	7
hydrogen_bonding	7
mitosis	7
evolutionary_computation	7
loops	7
sequence-structure	7
classification	7
dehydron	7
algorithm	7
metagenomics	7
statistics	6
torsion_angles	6
function_evolution	6
multiple_structure_comparison	6
cargo_attachment	6
polar	6
structure_core	6
free_energy	6
cell_cycle_inhibitors	6
cancer	6
statistical_coupling_analysis	6
protein_packing	6
database	6
core_genome	6
ion_channels	6
domains	6
genome-wide	6
orthology	6
data-mining	6
mine	6
small_world	6
binding	6
distance_matrices	5
power-law	5
swarms	5
solvent	5
buried	5
amino-acid-propensities	5
molecular_dynamics	5
nachr	5
contact_order	5
packing_density	5
surface	5
publications	5
book	5
core_residues	5
inhibitor_design	5
protein_fragments	5
r	5
hydrogen-bond	5
protein_stability	5
sporulation	4
conformation	4
score	4
replica_exchange	4
pdz	4
gene_finding	4
local_structure_similarity	4
dna_structure	4
data_integration	4
multiple_sequence_alignment	4
proj_assembly	4
s_h	4
nucleosome	4
mts	4
myovi	4
optimization	4
adaptive_algorithms	4
model_refinement	4
flexible_structure_alignment	4
family-size	4
scop-b-45-1-1-pre	4
aaa	4
promoter_identification	4
contact_prediction	4
protein-function	4
image_classification	4
server	4
modelling	3
myov	3
dynamic_optimization	3
multiple_structure_alignment	3
swi-swii	3
general	3
evolutionary-computation	3
scop-b-45-1-2	3
genomic_context	3
entropy	3
complex	3
kif1a	3
ramachandran	3
structure-clasification	3
metabolomics	3
solvation	3
tim-barrel	3
charged	3
contact-map	3
smd	3
superfunnel	3
microarray	3
complexes	3
stochastic_process	3
selection	3
topology	3
cryo_em	3
residue_annotation	3
gene_duplication	3
barrel	3
kin13	3
recognition	3
prediction_methods	3
programming	3
alignment	3
human_genetic_diversity	3
segmentation	3
ion_pairs	3
sca	3
propensities	3
career	3
adh	3
neofunctionalization	3
ncd	3
disorder	3
nadp	3
allostery	2
protein_dna	2
loop-strand	2
membrane_proteins	2
sampling	2
hmm	2
ntp	2
accessible	2
machine-learning	2
genome_sequence	2
kini	2
drug_discovery	2
level	2
sequence-alignment	2
fret-fiona	2
dna	2
pxdls	2
beta_sheet	2
turn	2
secondary_structure	2
interaction	2
directed_evolution	2
motor_mode	2
protein_moonlighting	2
remote_homology	2
linkers	2
conformational_selection	2
simulation	2
em	2
secondary-structure-assignment	2
protein-structure	2
scop-b-43-4	2
self-regulated_swarms	2
structural-class	2
neoteny	2
ribosome	2
bayesian_classifiers	2
sas	2
dynamic_environments	2
neural_networks	2
coarse-grained	2
interface	2
stabilization-centers	2
alzheimers	2
rnasee_inhibitor	2
centrality	2
hapmap	2
protein-protein	2
structure_fragments	2
drug-target	2
celegans	2
phylogenetics	2
structure_refinement	2
ubiquitination	2
molecular	2
loop	2
ph	2
robustness	2
local_interaction	2
self-regulated	2
flavoenzymes	2
advice	2
1q5x	2
crystalization	2
msa	2
aggregation	2
taxonomy	2
mathematical_morphology	2
time_series_analysis	2
graph	2
protein-ligand	2
drug-designing	2
protein_expression	2
active_site	2
burial	2
crohns_disease	2
proteins	2
folds	2
water-mediated_contacts	2
ace	2
biological	2
capri	2
actin	2
pathogenicity_island	2
neutral-networks	2
cath	2
protonation	2
graph_theory	2
multi-domain	2
gpcr	2
nucleotide_analogues	2
protein_disorder	2
kinetics	2
ksca	2
folding_nucleation	2
core	2
globin	2
chromatin	2
tertiary-structure	2
intrusion-detection-systems	2
homing-endonuclease	2
pathway-genome_annotation	2
kin14_kar3	2
interaction_maps	2
pmf	2
pdb-1ci0	1
pdb-1xxo	1
beta_flexibility	1
stock-market	1
weibull_function	1
ferredoxin-reductase-fad-binding	1
torsion	1
kinesin_neck	1
databases	1
software_development	1
tools	1
family_analysis	1
hsp70	1
promoter_finding	1
conformational_search	1
functional	1
web-server	1
potential	1
multiscale	1
prion	1
regions	1
ef-tu	1
siginal_transduction	1
gene_ontology	1
for_ana	1
structure_function	1
structure_domain	1
pdb-1i0r	1
pdb-1y30	1
threading	1
regression	1
gdh	1
wireing_digrams	1
shape	1
sequence_motif	1
abeta1-42	1
proj_interprets	1
domain_swapping	1
nadh	1
anticancer	1
microarrays	1
student	1
diffusion	1
genome	1
binding-site	1
kin8	1
subfunctionalization	1
sequence_conservation	1
structure_uncertainty	1
pdb-1w3o	1
weight	1
genetic-programming	1
forecasting	1
pdb-1wv4	1
oxaliplatin	1
correlation	1
mdh	1
smallrna	1
chromokinesin	1
conserved	1
pdb-1g79	1
memory	1
cloud_computing	1
pdb-1w3p	1
asp	1
clipx	1
test	1
blocks	1
computer_science	1
essay	1
scop-b-45	1
fold_recognition	1
mm-pbsa	1
ensemble	1
pdb-1ty9	1
mismatch-repair	1
convergent_evolution	1
fad	1
supersecondary_library	1
pdb-1w3q	1
pes	1
image	1
flagellar_motor	1
pdb-1flm	1
protein-peptide	1
docking_refinement	1
mcak	1
immunoglobulin	1
implicit_memory	1
subcellular_localization	1
transcription	1
pdb-1nrg	1
hoh	1
titration	1
pdb-1t9m	1
pdb-1eje	1
genetic-algorithms	1
cisplatin	1
sub-family	1
cavities	1
flexibility	1
low-complexity_regions	1
promoter	1
ppi	1
visualization	1
dcm	1
pdb-1xhn	1
transitions	1
structure_invariant	1
ef-g	1
pssm	1
loop_modeling	1
pdb-1g76	1
bpti	1
ncbi	1
sarig	1
hot_spots	1
daf-2	1
umbrella	1
proline	1
snp	1
data_mining	1
tree_of_life	1
systems	1
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proj_disocons	1
background-creation	1
ftsz	1
spo0a	1
hinge_bend	1
kin_loop5	1
sets	1
eef	1
daf-16	1
pdb-1g78	1
transmembrane	1
pi	1
hydrophobic_effect	1
go_model	1
harmonics	1
cis_trans	1
phosphorylation	1
candidate_gene	1
energy	1
micro-rna	1
synonymous	1
decision_trees	1
rabkinesin	1

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