Group: structural_bioinformatics - with tag benchmark [14 articles] Export

Recent papers posted by members of the structural_bioinformatics group with tag benchmark

	Docking and scoring protein complexes: CAPRI 3rd Edition [My Copy] Proteins: Structure, Function, and Bioinformatics, Vol. 9999, No. 9999. (2007), NA. by Marc F. Lensink, Raúl Méndez, Shoshana J. Wodak posted to benchmark capri docking by csrocha to the group structural_bioinformatics on 2008-10-10 15:14:58 as along with 9 people mgomes flbarroso bicko ruvido cjeans carlescorbi yalexeev middledomain timg
	Evaluation of protein fold comparison servers. [My Copy] Proteins, Vol. 54, No. 2. (1 February 2004), pp. 260-270. by M. Novotny, D. Madsen, G. J. Kleywegt posted to benchmark protein_structure structure_alignment structure_comparison by ana to the group structural_bioinformatics on 2006-01-31 01:50:43 as along with 2 people and 3 groups reyez jwm Radiation_Damage Stressosome Bioinformatics
	An assessment of the accuracy of methods for predicting hydrogen positions in protein structures. [My Copy] Proteins, Vol. 61, No. 2. (1 November 2005), pp. 296-309. by L. R. Forrest, B. Honig posted to benchmark hydrogen-bond protein_structure by ana to the group structural_bioinformatics on 2005-10-09 04:04:11 as along with 2 people and 1 group flbarroso cat_worth Bioinformatics
	Detecting putative orthologs. [My Copy] Bioinformatics, Vol. 19, No. 13. (1 September 2003), pp. 1710-1711. by D. P. Wall, H. B. Fraser, A. E. Hirsh posted to benchmark comparative_genomics orthology phylogeny sequence_comparison by ana to the group structural_bioinformatics on 2005-06-13 22:56:10 as along with 7 people and 2 groups cgaugain operon indigoviolet dquest ninch rvosa cerca Bioinformatics EisenLab
	The Closest BLAST Hit Is Often Not the Nearest Neighbor [My Copy] Journal of Molecular Evolution, Vol. 52, No. 6. (24 June 2001), pp. 540-542. by Liisa B. Koski, G. Brian Golding posted to benchmark comparative_genomics phylogeny protein_sequence sequence_comparison by ana to the group structural_bioinformatics on 2005-06-13 22:47:52 as along with 6 people and 2 groups pansapiens dayjm mycitation indigoviolet AaronDarling cerca Bioinformatics EisenLab
	Alternative alignments from comparison of protein structures [My Copy] Proteins: Structure, Function, and Bioinformatics, Vol. 56, No. 3. (2 April 2004), pp. 519-527. by Edward S. Shih, Ming-Jing Hwang posted to benchmark protein_structure structure_comparison by ana to the group structural_bioinformatics on 2005-06-06 19:05:51 as along with 4 people and 3 groups barry Einat eweaver dchughes Bioinformatics G4ID Genetics-of-Gambling
	Comprehensive evaluation of protein structure alignment methods: scoring by geometric measures. [My Copy] J Mol Biol, Vol. 346, No. 4. (4 March 2005), pp. 1173-1188. by R. Kolodny, P. Koehl, M. Levitt posted to score benchmark protein_structure structure_comparison by ana to the group structural_bioinformatics on 2005-05-24 01:07:02 as along with 5 people and 1 group karbak lulab balajis analogAI reyez Bioinformatics
	Processing and analysis of CASP3 protein structure predictions. [My Copy] Proteins, Vol. Suppl 3 (1999), pp. 22-29. by A. Zemla, C. Venclovas, J. Moult, K. Fidelis posted to benchmark structure_alignment structure_comparison structure_prediction by ana to the group structural_bioinformatics on 2005-05-03 22:37:07 as along with 1 group Bioinformatics
	Automated large scale evaluation of protein structure predictions. [My Copy] Proteins, Vol. Suppl 3 (1999), pp. 7-14. by P. Lackner, W. A. Koppensteiner, F. S. Domingues, M. J. Sippl posted to benchmark structure_alignment structure_comparison structure_prediction by ana to the group structural_bioinformatics on 2005-05-03 22:23:12 as along with 1 group Bioinformatics
	RMS/coverage graphs: a qualitative method for comparing three-dimensional protein structure predictions. [My Copy] Proteins, Vol. Suppl 3 (1999), pp. 15-21. by T. J. Hubbard posted to benchmark structure_alignment structure_comparison by ana to the group structural_bioinformatics on 2005-05-03 22:21:15 as along with 1 person and 1 group timhubbard Bioinformatics
	A model for statistical significance of local similarities in structure. [My Copy] J Mol Biol, Vol. 326, No. 5. (7 March 2003), pp. 1307-1316. by A. Stark, S. Sunyaev, R. B. Russell posted to benchmark local_structure_similarity protein_structure structure_comparison by ana to the group structural_bioinformatics on 2005-04-21 05:47:44 as along with 8 people and 1 group karbak nigham chad_davis thamelry nickolay robert scis0000001 siebertm Bioinformatics
	Measuring the similarity of protein structures by means of the universal similarity metric. [My Copy] Bioinformatics, Vol. 20, No. 7. (1 May 2004), pp. 1015-1021. by N. Krasnogor, D. A. Pelta posted to benchmark contact_maps protein_structure structure_alignment structure_comparison by ana to the group structural_bioinformatics on 2005-04-21 01:55:27 as along with 4 people and 1 group okarsligil vavi rabio rsantana Bioinformatics
	The structural alignment between two proteins: is there a unique answer? [My Copy] Protein Sci, Vol. 5, No. 7. (July 1996), pp. 1325-1338. by A. Godzik posted to benchmark contact_maps structure_alignment structure_comparison structure_superposition by ana to the group structural_bioinformatics on 2005-04-20 02:30:10 as along with 3 people and 1 group j3xucite rabio Inchoate Bioinformatics
	Sensitivity and selectivity in protein structure comparison. [My Copy] Protein Sci, Vol. 13, No. 3. (March 2004), pp. 773-785. by M. L. Sierk, W. R. Pearson posted to benchmark score sequence_alignment sequence_comparison structure_alignment structure_comparison by ana to the group structural_bioinformatics on 2005-03-22 23:01:11 as along with 3 people and 1 group karbak pansapiens huyun110 Bioinformatics

Note: You may cite this page as: http://www.citeulike.org/group/122/tag/benchmark

metaheuristic	66
evolutionary-computation	58
performance-assessment	32
structure_comparison	30
comparison	22
structure_alignment	21
genetic-algorithm	19
continuous	18
protein_structure	18
optimization	15
xml	12
differential-evolution	11
network	10
simulation	10
dynamic	9
sequence_comparison	9
crossover	8
docking	8
multi-objective	8
mutation	8
agent	7
aascsp	6
atc	6
classical	6
comparative_genomics	6
contact_maps	6
exact	6
phylogeny	6
score	6
structure_prediction	6
clique	5
filesystem	5
affymetrix	4
ant-colony-optimization	4
benchmarking	4
bioinformatics	4
building-block	4
convergence	4
database	4
deep-seq	4
emulation	4
fitness-landscape	4
hybridization	4
hydrogen-bond	4
manufacturing-control	4
microarray	4
motor	4
multi-agent	4
ontology	4
operator	4
parameter-setting	4
protein	4
recognition	4
regulatory	4
statistic	4
stochastic	4
tabu-search	4
xmark	4
3d	3
aascsp-examples	3
alignment	3
analysis-tool	3
background	3
chip-seq	3
classification	3
csp	3
ctcf	3
dft	3
evaluation	3
experiment-planning	3
expression	3
gpgpu	3
gpu	3
high-throughput-sequencing	3
inference	3
local_structure_similarity	3
msp	3
mtc	3
multi-modal	3
neural-network	3
nn	3
orthology	3
owl	3
performance-analysis	3
pipeline	3
pka	3
protein_sequence	3
read-coverage	3
segmentation	3
sequence_alignment	3
shape	3
storage	3
structure_superposition	3
texture	3
tools	3
tpc	3
variable-structure	3
workload	3
wtd	3
xset	3

Group: structural_bioinformatics - with tag benchmark [14 articles] Export

Related Tags