Group: structural_bioinformatics - with tag new [37 articles] Export

Recent papers posted by members of the structural_bioinformatics group with tag new

	Profile-based string kernels for remote homology detection and motif extraction. [My Copy] J Bioinform Comput Biol, Vol. 3, No. 3. (June 2005), pp. 527-550. by R. Kuang, E. Ie, K. Wang, et al.K. Wang, M. Siddiqi, Y. Freund, C. Leslie posted to new by ana to the group structural_bioinformatics on 2007-08-02 23:32:02 as along with 3 people and 1 group barry chrn craigtalbert Bioinformatics
	Activity of a C. elegans GATA transcription factor, ELT-1, expressed in yeast. [My Copy] J Mol Biol, Vol. 253, No. 5. (10 November 1995), pp. 665-676. by Y. H. Shim, J. J. Bonner, T. Blumenthal posted to new by ana to the group structural_bioinformatics on 2007-07-31 19:23:38 as along with 2 people and 2 groups thegoose2 tharris C. elegans / WormBase Bioinformatics
	The evolutionary duplication and probable demise of an endodermal GATA factor in Caenorhabditis elegans. [My Copy] Genetics, Vol. 165, No. 2. (October 2003), pp. 575-588. by T. Fukushige, B. Goszczynski, H. Tian, J. D. McGhee posted to new by ana to the group structural_bioinformatics on 2007-07-31 19:22:05 as along with 2 people and 2 groups thegoose2 tharris C. elegans / WormBase Bioinformatics
	Vector analysis as a fast and easy method to compare gene expression responses between different experimental backgrounds [My Copy] BMC Bioinformatics, Vol. 6, No. 1. (2005) by Rainer Breitling, Patrick Armengaud, Anna Amtmann posted to new by ana to the group structural_bioinformatics on 2007-07-23 04:33:08 as along with 1 person and 1 group 0004573p Bioinformatics
	Hotspots of transcription factor colocalization in the genome of Drosophila melanogaster. [My Copy] Proc Natl Acad Sci U S A (31 July 2006) by Celine Moorman, Ling V V. Sun, Junbai Wang, et al.Elzo de Wit, Wendy Talhout, Lucas D D. Ward, Frauke Greil, Xiang-Jun J. Lu, Kevin P P. White, Harmen J J. Bussemaker, Bas van Steensel posted to new by ana to the group structural_bioinformatics on 2007-07-17 03:27:57 as along with 4 people and 3 groups indigoviolet xwbcn johncumbers wrowell Bioinformatics EisenLab Cline_lab
	Combined experimental and computational approaches to study the regulatory elements in eukaryotic genes [My Copy] Brief Bioinform (12 July 2007), bbm027. by Nikolay A. Kolchanov, Tatyana I. Merkulova, Elena V. Ignatieva, et al.Elena A. Ananko, Dmitry Y. Oshchepkov, Viktor G. Levitsky, Gennady V. Vasiliev, Nataly V. Klimova, Vasily M. Merkulov, T. Charles Hodgman posted to new by ana to the group structural_bioinformatics on 2007-07-16 21:26:56 as along with 5 people and 1 group gotgenes wowalz GustavoLacerda cabbagezs xili03 Bioinformatics
	The Evolution of Transcriptional Regulation in Eukaryotes [My Copy] Mol Biol Evol, Vol. 20, No. 9. (1 September 2003), pp. 1377-1419. by Gregory A. Wray, Matthew W. Hahn, Ehab Abouheif, et al.James P. Balhoff, Margaret Pizer, Matthew V. Rockman, Laura A. Romano posted to new by ana to the group structural_bioinformatics on 2007-07-16 21:25:14 as along with 11 people and 4 groups athma provero wrowell dpollard adepace nickluscombe anatiferous mimulus_99 cisevol emptyhb emmahe Bioinformatics EisenLab EBI-regulation cis-regulatory-evolution
	Orchestrated response: a symphony of transcription factors for gene control. [My Copy] Genes Dev, Vol. 14, No. 20. (15 October 2000), pp. 2551-2569. by B. Lemon, R. Tjian posted to new by ana to the group structural_bioinformatics on 2007-07-16 21:25:09 as along with 3 people and 2 groups athma nickluscombe lusk Bioinformatics EBI-regulation
	Analysis of computational approaches for motif discovery [My Copy] Algorithms for Molecular Biology, Vol. 1, No. 1. (19 May 2006), 8. by Nan Li, Martin Tompa posted to new by ana to the group structural_bioinformatics on 2007-07-07 19:41:31 as along with 11 people and 1 group wowalz yevishere barry tuck chad_davis dquest lusk nklee maximilianh xi03 csdhwang Bioinformatics
	Genomic cis-regulatory architecture and trans-acting regulators of a single interneuron-specific gene battery in C. elegans. [My Copy] Dev Cell, Vol. 6, No. 6. (June 2004), pp. 757-770. by A. S. Wenick, O. Hobert posted to new by ana to the group structural_bioinformatics on 2007-07-03 00:28:04 as along with 4 people and 2 groups thegoose2 tharris maximilianh blobbybirdman C. elegans / WormBase Bioinformatics
	Predicting gene expression from sequence. [My Copy] Cell, Vol. 117, No. 2. (16 April 2004), pp. 185-198. by M. A. Beer, S. Tavazoie posted to new by ana to the group structural_bioinformatics on 2007-07-03 00:00:13 as along with 12 people and 5 groups rsaito thegoose2 winterschlaefer tharris xwbcn adepace nickluscombe noano koller jrest phoenixzxl klo TranscriptionalRegulationWithThermodynamicModels C. elegans / WormBase Bioinformatics EisenLab EBI-regulation
	FoxA1 binding to the MMTV LTR modulates chromatin structure and transcription. [My Copy] Exp Cell Res, Vol. 304, No. 2. (1 April 2005), pp. 593-603. by P. H. Holmqvist, S. Belikov, K. S. Zaret, O. Wrange posted to new by ana to the group structural_bioinformatics on 2007-07-02 23:36:40 as along with 1 group Bioinformatics
	Genome-scale analysis of in vivo spatiotemporal promoter activity in Caenorhabditis elegans [My Copy] Nature Biotechnology, Vol. 25, No. 6. (07 May 2007), pp. 663-668. by Denis Dupuy, Nicolas Bertin, César A. Hidalgo, et al.Kavitha Venkatesan, Domena Tu, David Lee, Jennifer Rosenberg, Nenad Svrzikapa, Aurélie Blanc, Alain Carnec, Anne-Ruxandra Carvunis, Rock Pulak, Jane Shingles, John Reece-Hoyes, Rebecca Hunt-Newbury, Ryan Viveiros, William A. Mohler, Murat Tasan, Frederick P. Roth, Christian Le Peuch, Ian A. Hope, Robert Johnsen, Donald G. Moerman, Albert-László Barabási, David Baillie, Marc Vidal posted to new by ana to the group structural_bioinformatics on 2007-07-02 23:33:08 as along with 5 people and 3 groups thegoose2 eetadic tharris brant Doug C. elegans / WormBase Bioinformatics EisenLab
	A developmental timing microRNA and its target regulate life span in C. elegans. [My Copy] Science, Vol. 310, No. 5756. (23 December 2005), pp. 1954-1957. by M. Boehm, F. Slack posted to new by ana to the group structural_bioinformatics on 2007-07-02 23:32:46 as along with 4 people and 2 groups thegoose2 tharris eckart_bindewald tardigrade C. elegans / WormBase Bioinformatics
	Comparative genomics of nematodes. [My Copy] Trends Genet, Vol. 21, No. 10. (October 2005), pp. 573-581. by M. Mitreva, M. L. Blaxter, D. M. Bird, J. P. McCarter posted to new by ana to the group structural_bioinformatics on 2007-07-02 23:09:12 as along with 2 people and 2 groups thegoose2 tharris C. elegans / WormBase Bioinformatics
	Regulation of Organogenesis by the Caenorhabditis elegans FoxA Protein PHA-4 [My Copy] Science, Vol. 295, No. 5556. (1 February 2002), pp. 821-825. by J. Gaudet, S. E. Mango posted to new by ana to the group structural_bioinformatics on 2007-06-25 20:28:47 as along with 6 people and 3 groups thegoose2 tharris tardigrade postrational maximilianh Auger C. elegans / WormBase Bioinformatics Dead 60's
	Statistical analysis of the genomic distribution and correlation of regulatory elements in the ENCODE regions. [My Copy] Genome research, Vol. 17, No. 6. (1 June 2007), pp. 787-797. by Zhengdong D. Zhang, Alberto Paccanaro, Yutao Fu, et al.Sherman Weissman, Zhiping Weng, Joseph Chang, Michael Snyder, Mark B. Gerstein posted to new by ana to the group structural_bioinformatics on 2007-06-14 18:55:20 as along with 9 people and 4 groups paccanarolab aprasad Borelli kengg ghattem epigenetics blobbybirdman inesdesantiago jasonflannick Paccanaro Lab Bioinformatics Plantandetc UH - Computational Biology
	A global analysis of Caenorhabditis elegans operons [My Copy] Nature, Vol. 417, No. 6891. (20 June 2002), pp. 851-854. by Thomas Blumenthal, Donald Evans, Christopher D. Link, et al.Alessandro Guffanti, Daniel Lawson, Jean Thierry-Mieg, Danielle Thierry-Mieg, Wei L. Chiu, Kyle Duke, Moni Kiraly, Stuart K. Kim posted to new by ana to the group structural_bioinformatics on 2007-06-12 23:44:04 as along with 1 group Bioinformatics
	Genome organization: Teamed up for transcription [My Copy] Nature, Vol. 417, No. 6891. (20 June 2002), pp. 797-798. by Christian von Mering, Peer Bork posted to new by ana to the group structural_bioinformatics on 2007-06-12 23:41:46 as along with 1 group Bioinformatics
	Insulin/IGF Signaling and HNF-3/forkhead Proteins [My Copy] Science, Vol. 279, No. 5352. (6 February 1998), 783e. by Terry G. Unterman;, Kui Lin, Cynthia Kenyon posted to new by ana to the group structural_bioinformatics on 2007-06-09 03:28:06 as along with 1 group Bioinformatics
	daf-16: An HNF-3/forkhead family member that can function to double the life-span of Caenorhabditis elegans. [My Copy] Science, Vol. 278, No. 5341. (14 November 1997), pp. 1319-1322. by K. Lin, J. B. Dorman, A. Rodan, C. Kenyon posted to new by ana to the group structural_bioinformatics on 2007-06-09 03:22:09 as along with 3 people and 6 groups thegoose2 HEIRS tharris HEIRS Immunology and Autoimmune Diseases HEIRS - Environmental Illness Research HEIRS Cellular Biology HEIRS Adaptive Biology, Ecology and Evolution C. elegans / WormBase Bioinformatics
	Transcription factors: structural families and principles of DNA recognition. [My Copy] Annu Rev Biochem, Vol. 61 (1992), pp. 1053-1095. by C. O. Pabo, R. T. Sauer posted to new by ana to the group structural_bioinformatics on 2007-06-08 02:56:43 as along with 3 people and 1 group barry medic0747 uz_labu_laimi Bioinformatics
	Co-crystal structure of the HNF-3/fork head DNA-recognition motif resembles histone H5. [My Copy] Nature, Vol. 364, No. 6436. (29 July 1993), pp. 412-420. by K. L. Clark, E. D. Halay, E. Lai, S. K. Burley posted to new by ana to the group structural_bioinformatics on 2007-06-08 02:55:14 as along with 1 group Bioinformatics
	The fork head domain: a novel DNA binding motif of eukaryotic transcription factors? [My Copy] Cell, Vol. 63, No. 3. (2 November 1990), pp. 455-456. by D. Weigel, H. Jäckle posted to new by ana to the group structural_bioinformatics on 2007-06-08 02:53:31 as along with 1 person and 1 group jayster4 Bioinformatics
	An evolutionary framework for the study of developmental evolution in a set of nematodes related to Caenorhabditis elegans. [My Copy] Mol Phylogenet Evol, Vol. 8, No. 2. (October 1997), pp. 249-259. by J. G. Baldwin, L. M. Frisse, J. T. Vida, C. D. Eddleman, W. K. Thomas posted to new by ana to the group structural_bioinformatics on 2007-06-06 01:19:54 as along with 2 people and 2 groups thegoose2 tharris C. elegans / WormBase Bioinformatics
	A molecular evolutionary framework for the phylum Nematoda [My Copy] Nature, Vol. 392, No. 6671. (05 March 1998), pp. 71-75. by Mark L. Blaxter, Paul De Ley, James R. Garey, et al.Leo X. Liu, Patsy Scheldeman, Andy Vierstraete, Jacques R. Vanfleteren, Laura Y. Mackey, Mark Dorris, Linda M. Frisse, J. T. Vida, W. Kelley Thomas posted to new by ana to the group structural_bioinformatics on 2007-06-06 01:16:45 as along with 1 person and 1 group cmzmasek Bioinformatics
	Caenorhabditis elegans is a nematode. [My Copy] Science, Vol. 282, No. 5396. (11 December 1998), pp. 2041-2046. by M. Blaxter posted to new by ana to the group structural_bioinformatics on 2007-06-06 01:14:35 as along with 3 people and 2 groups thegoose2 tharris tardigrade C. elegans / WormBase Bioinformatics
	Conservation, regulation, synteny, and introns in a large-scale C. briggsae-C. elegans genomic alignment. [My Copy] Genome research, Vol. 10, No. 8. (1 August 2000), pp. 1115-1125. by W. J. Kent, A. M. Zahler posted to new by ana to the group structural_bioinformatics on 2007-06-06 01:08:06 as along with 4 people and 2 groups rshe thegoose2 tharris wenhan C. elegans / WormBase Bioinformatics
	Building a dictionary for genomes: Identification of presumptive regulatory sites by statistical analysis [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 97, No. 18. (29 August 2000), pp. 10096-10100. by Harmen J. Bussemaker, Hao Li, Eric D. Siggia posted to new by ana to the group structural_bioinformatics on 2007-06-05 01:42:47 as along with 4 people and 1 group marcio dquest johncumbers ep161302 Bioinformatics
	Identification of the differential distribution patterns of mRNAs and consensus binding sequences for mouse DAF-16 homologues. [My Copy] Biochem J, Vol. 349, No. Pt 2. (15 July 2000), pp. 629-634. by T. Furuyama, T. Nakazawa, I. Nakano, N. Mori posted to new by ana to the group structural_bioinformatics on 2007-06-05 00:29:41 as along with 3 people and 2 groups thegoose2 tharris johncumbers C. elegans / WormBase Bioinformatics
	DAF-16 target genes that control C. elegans life-span and metabolism. [My Copy] Science, Vol. 300, No. 5619. (25 April 2003), pp. 644-647. by S. S. Lee, S. Kennedy, A. C. Tolonen, G. Ruvkun posted to new by ana to the group structural_bioinformatics on 2007-06-05 00:22:35 as along with 3 people and 2 groups thegoose2 tharris johncumbers C. elegans / WormBase Bioinformatics
	Transcriptional outputs of the Caenorhabditis elegans forkhead protein DAF-16 [My Copy] Aging Cell, Vol. 2, No. 2. (2003), pp. 111-121. by Joshua Mcelwee, Kerry Bubb, James H. Thomas posted to new by ana to the group structural_bioinformatics on 2007-06-05 00:20:05 as along with 1 person and 1 group tardigrade Bioinformatics
	SMK-1, an Essential Regulator of DAF-16-Mediated Longevity [My Copy] Cell, Vol. 124, No. 5. (10 March 2006), pp. 1039-1053. by Suzanne Wolff, Hui Ma, Denise Burch, Gustavo A. Maciel, Tony Hunter, Andrew Dillin posted to new by ana to the group structural_bioinformatics on 2007-06-05 00:16:05 as along with 1 group Bioinformatics
	PhyloGibbs: a Gibbs sampling motif finder that incorporates phylogeny. [My Copy] PLoS computational biology, Vol. 1, No. 7. (December 2005) by Rahul Siddharthan, Eric D. Siggia, Erik van Nimwegen posted to new by ana to the group structural_bioinformatics on 2007-06-02 04:04:46 as along with 17 people and 2 groups farhat wowalz aprasad cajunsushi treangen druvus postrational dquest AaronDarling nickluscombe noano adsmitty lusk lilou idonaldson yevishere isimpson Bioinformatics EBI-regulation
	Applied bioinformatics for the identification of regulatory elements. [My Copy] Nat Rev Genet, Vol. 5, No. 4. (April 2004), pp. 276-287. by W. W. Wasserman, A. Sandelin posted to new by ana to the group structural_bioinformatics on 2007-06-02 04:03:24 as along with 18 people and 7 groups wowalz yas icases chad_davis moborg gpalidwor dchughes nickluscombe johncumbers giovanni xiaobeizhao bertelsen Stew nklee jdiezperezj ArtemPankin mariakmejia isimpson Bioinformatics EisenLab G4ID EBI-regulation GeschwindLab TNT Genetics-of-Gambling
	Practical Strategies for Discovering Regulatory DNA Sequence Motifs [My Copy] PLoS Comput Biol, Vol. 2, No. 4. (28 April 2006), e36. by Kenzie D. MacIsaac, Ernest Fraenkel posted to new by ana to the group structural_bioinformatics on 2007-06-02 03:05:13 as along with 17 people and 1 group Jporci leemond31 Dulce maximilianh heliopais daforerog natstreet druvus giovenko nuin bryankr chad_davis balicea hggr GustavoLacerda svdate kristallreiner Bioinformatics
	Genes that act downstream of DAF-16 to influence the lifespan of Caenorhabditis elegans [My Copy] Nature, Vol. 424, No. 6946. (17 July 2003), pp. 277-283. by Coleen T. Murphy, Steven A. Mccarroll, Cornelia I. Bargmann, et al.Andrew Fraser, Ravi S. Kamath, Julie Ahringer, Hao Li, Cynthia Kenyon posted to new by ana to the group structural_bioinformatics on 2007-06-02 03:04:32 as along with 3 people and 2 groups thegoose2 tharris johncumbers C. elegans / WormBase Bioinformatics

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Group: structural_bioinformatics - with tag new [37 articles] Export

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