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Group: beta - with tag phage [28 articles]

Recent papers posted by members of the beta group with tag phage
  • Does common architecture reveal a viral lineage spanning all three domains of life?
    Mol Cell, Vol. 16, No. 5. (3 December 2004), pp. 673-685.
    by SD Benson, JK Bamford, DH Bamford, RM Burnett
    posted to phage classification by vwchan to the group beta on 2007-04-05 21:03:04 as **
  • Bacteriophage taxonomy in 1987.
    Microbiol Sci, Vol. 4, No. 7. (July 1987), pp. 214-218.
    by HW Ackermann
    posted to phage classification by vwchan to the group beta on 2007-04-05 20:55:04 as **
  • Guidelines for bacteriophage characterization.
    Adv Virus Res, Vol. 23 (1978), pp. 1-24.
    by HW Ackermann, A Audurier, L Berthiaume, LA Jones, JA Mayo, AK Vidaver
    posted to phage classification by vwchan to the group beta on 2007-04-05 20:50:01 as **
  • Opinion: Viral metagenomics
    Nature Reviews Microbiology, Vol. 3, No. 6. (01 June 2005), pp. 504-510.
    by Robert A Edwards, Forest Rohwer
    posted to phage classification by vwchan to the group beta on 2007-04-05 20:42:07 as ** along with 4 people mcox dayjm AaronDarling bluto
  • Detecting overlapping coding sequences in virus genomes.
    BMC Bioinformatics, Vol. 7, No. 1. (16 February 2006)
    by Andrew E Firth, Chris M Brown
    posted to phage-genes phage by vwchan to the group beta on 2007-01-26 00:53:17 as ** along with 1 person Ayest
  • On the origin of microbial ORFans: quantifying the strength of the evidence for viral lateral transfer
    BMC Evolutionary Biology, Vol. 6 (16 August 2006), 63.
    by Yanbin Yin, Daniel Fischer
    posted to phage-genes phage by vwchan to the group beta on 2007-01-26 00:46:58 as **
  • Genome Annotation Transfer Utility (GATU): rapid annotation of viral genomes using a closely related reference genome
    BMC Genomics, Vol. 7 (13 June 2006), 150.
    by Vasily T Tcherepanov, Angelika Ehlers, Chris Upton
    posted to phage-genes phage by vwchan to the group beta on 2007-01-26 00:43:59 as **
  • GeneMarkS: a self-training method for prediction of gene starts in microbial genomes. Implications for finding sequence motifs in regulatory regions.
    Nucleic Acids Res, Vol. 29, No. 12. (15 June 2001), pp. 2607-2618.
    by J Besemer, A Lomsadze, M Borodovsky
    posted to phage-genes phage by vwchan to the group beta on 2007-01-26 00:38:11 as ** along with 2 people azazello wenhan
  • ZCURVE_V: a new self-training system for recognizing protein-coding genes in viral and phage genomes.
    BMC Bioinformatics, Vol. 7 (2006)
    by FB Guo, CT Zhang
    posted to phage-genes phage by vwchan to the group beta on 2007-01-26 00:30:57 as **
  • Recoding in bacteriophages and bacterial IS elements.
    Trends Genet, Vol. 22, No. 3. (March 2006), pp. 174-181.
    by PV Baranov, O Fayet, RW Hendrix, JF Atkins
    posted to phage-genes phage by vwchan to the group beta on 2007-01-26 00:24:06 as **
  • Bacteriophages and pathogenicity: more than just providing a toxin?
    Microbes Infect, Vol. 8, No. 5. (April 2006), pp. 1365-1371.
    by CR Tinsley, E Bille, X Nassif
    posted to review phage by vwchan to the group beta on 2007-01-21 19:09:28 as ****
  • Distribution of prophages and SGI-1 antibiotic-resistance genes among different Salmonella enterica serovar Typhimurium isolates.
    Microbiology, Vol. 152, No. Pt 7. (July 2006), pp. 2137-2147.
    by AP Hermans, AM Beuling, AH van Hoek, HJ Aarts, T Abee, MH Zwietering
    posted to prophage phage antibiotic_resistance by vwchan to the group beta on 2007-01-21 18:51:59 as **
  • Phage_Finder: Automated identification and classification of prophage regions in complete bacterial genome sequences.
    Nucleic Acids Res (24 October 2006)
    by Derrick E Fouts
    posted to lateral_gene_transfer phage prediction prophage trna by vwchan to the group beta on 2006-11-03 22:13:11 as *****
  • Distribution of minigenes in the bacteriophage lambda chromosome.
    Gene, Vol. 329 (31 March 2004), pp. 115-124.
    by NA Oviedo, H Salgado, J Collado-Vides, G Guarneros
    posted to phage phage-genes by vwchan to the group beta on 2006-11-03 01:15:37 as ** along with 1 person discreteonyxorb
  • A proline tRNA(CGG) gene encompassing the attachment site of temperate phage 16-3 is functional and convertible to suppressor tRNA.
    Mol Microbiol, Vol. 54, No. 3. (November 2004), pp. 742-754.
    by B Blaha, S Semsey, S Ferenczi, Z Csiszovszki, PP Papp, L Orosz
    posted to insertion-site phage trna by vwchan to the group beta on 2006-11-03 01:08:24 as **
  • Construction, characterization, and use of two Listeria monocytogenes site-specific phage integration vectors.
    J Bacteriol, Vol. 184, No. 15. (August 2002), pp. 4177-4186.
    by P Lauer, MY Chow, MJ Loessner, DA Portnoy, R Calendar
    posted to integration phage by vwchan to the group beta on 2006-06-28 21:00:14 as **
  • The origin of viruses and their possible roles in major evolutionary transitions
    Virus Research, Vol. 117, No. 1. (April 2006), pp. 5-16.
    by Patrick Forterre
    posted to phage by vwchan to the group beta on 2006-06-21 00:00:03 as ** along with 1 person philosof
  • Virus Taxonomy: Classification and Nomenclature of Viruses: Seventh Report of the International Committee on Taxonomy of Viruses
    (15 October 2000)
    by MH Van Regenmortel, International, CM Fauquet
    posted to phage review by vwchan to the group beta on 2006-06-20 22:45:43 as **
  • Diversity of phage integrases in Enterobacteriaceae: development of markers for environmental analysis of temperate phages
    Environmental Microbiology, Vol. 7, No. 10. (October 2005), pp. 1558-1567.
    by Claire Balding, Stephen A Bromley, Roger W Pickup, Jon R Saunders
    posted to integrase phage by vwchan to the group beta on 2006-06-20 18:57:39 as **
  • Virology: The gene weavers
    Nature, Vol. 441, No. 7094. (07 June 2006), pp. 683-685.
    by Garry Hamilton
    posted to phage by vwchan to the group beta on 2006-06-20 18:50:58 as ** along with 3 people and 1 group dayjm cmm rhyss FAB-lab
  • Phage Integrases: Biology and Applications
    Journal of Molecular Biology, Vol. 335, No. 3. (16 January 2004), pp. 667-678.
    by Amy C Groth, Michele P Calos
    posted to insertion-site integrase phage by vwchan to the group beta on 2006-06-20 18:47:43 as **
  • Fifty-three years since Hershey and Chase; much ado about pressure but which pressure is it?
    Virology, Vol. 344, No. 1. (5 January 2006), pp. 221-229.
    by Ian J Molineux
    posted to phage review by vwchan to the group beta on 2006-06-20 18:39:12 as **
  • Phages and the evolution of bacterial pathogens: from genomic rearrangements to lysogenic conversion.
    Microbiol Mol Biol Rev, Vol. 68, No. 3. (September 2004), pp. 560-602.
    by H Brüssow, C Canchaya, WD Hardt
    posted to phage by vwchan to the group beta on 2006-06-20 18:29:32 as **
  • Role of Secondary Attachment Sites in Changing the Specificity of Site-Specific Recombination
    J. Bacteriol., Vol. 188, No. 9. (1 May 2006), pp. 3409-3411.
    by Edit Rutkai, Andrea Gyorgy, Laszlo Dorgai, Robert A Weisberg
    posted to insertion-site phage by vwchan to the group beta on 2006-06-16 20:03:24 as **
  • Phage Taxonomy: We Agree To Disagree
    J. Bacteriol., Vol. 186, No. 21. (1 November 2004), pp. 7029-7031.
    by Daniel Nelson
    posted to phage by vwchan to the group beta on 2006-06-16 19:20:22 as **
  • Site-specific integration of the Haemophilus influenzae bacteriophage HP1: location of the boundaries of the phage attachment site.
    J Bacteriol, Vol. 174, No. 20. (October 1992), pp. 6674-6677.
    by MA Hauser, JJ Scocca
    posted to boundary insertion-site integration phage by vwchan to the group beta on 2006-06-09 19:59:42 as ***
  • Chromosomal insertion sites for phages and plasmids.
    J Bacteriol, Vol. 174, No. 23. (December 1992), pp. 7495-7499.
    by AM Campbell
    posted to insertion-site phage prophage by vwchan to the group beta on 2006-06-09 19:51:59 as **
  • Prophage insertion sites.
    Res Microbiol, Vol. 154, No. 4. (May 2003), pp. 277-282.
    by A Campbell
    posted to insertion-site phage prophage by vwchan to the group beta on 2006-06-09 19:50:03 as **
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