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Group: BioinfoCIPF - with tag clustering [15 articles]

Recent papers posted by members of the BioinfoCIPF group with tag clustering
  • Multiple structural alignment and clustering of RNA sequences.
    Bioinformatics (25 February 2007)
    by Elfar Torarinsson, Jakob H H Havgaard, Jan Gorodkin
    posted to clustering rna secondary_structure structure_alignment by marcius to the group BioinfoCIPF on 2007-03-01 12:29:48 as ** along with 7 people and 1 group eckart_bindewald eweaver ppgardne ilh zwang dunnp zhouyu SGU-CIPF
  • From The Cover: Global mapping of the protein structure space and application in structure-based inference of protein function
    PNAS, Vol. 102, No. 10. (8 March 2005), pp. 3651-3656.
    by Jingtong Hou, Se-Ran Jun, Chao Zhang, Sung-Hou Kim
    posted to algorithms bioinformatics clustering protein_structure by marcius to the group BioinfoCIPF on 2006-10-26 08:42:48 as ** along with 1 person and 1 group tny SGU-CIPF
  • The Many Faces of Protein–Protein Interactions: A Compendium of Interface Geometry
    PLoS Computational Biology, Vol. 2, No. 9. (1 September 2006), e124.
    by Wan K Kim, Andreas Henschel, Christof Winter, Michael Schroeder
    posted to bioinformatics clustering protein_interactions by marcius to the group BioinfoCIPF on 2006-09-29 08:58:11 as ** along with 1 group SGU-CIPF
  • Sampling Realistic Protein Conformations Using Local Structural Bias
    PLoS Computational Biology, Vol. 2, No. 9. (1 September 2006), e131.
    by Thomas Hamelryck, John T Kent, Anders Krogh
    posted to biophysics clustering computational_biology dynamics structure by marcius to the group BioinfoCIPF on 2006-09-29 08:57:03 as ** along with 1 person and 1 group mijam SGU-CIPF
  • The RNA Ontology Consortium: an open invitation to the RNA community.
    RNA, Vol. 12, No. 4. (April 2006), pp. 533-541.
    by NB Leontis, RB Altman, HM Berman, SE Brenner, JW Brown, DR Engelke, SC Harvey, SR Holbrook, F Jossinet, SE Lewis, F Major, DH Mathews, JS Richardson, JR Williamson, E Westhof
    posted to bioinformatics classification clustering rna sequence structure by marcius to the group BioinfoCIPF on 2006-09-07 17:37:08 as ** along with 2 people and 1 group reyez debatebob SGU-CIPF
  • Methods for evaluating clustering algorithms for gene expression data using a reference set of functional classes
    BMC Bioinformatics, Vol. 7 (31 August 2006), 397.
    by Susmita Datta, Somnath Datta
    posted to clustering functional_annotation by ealloza to the group BioinfoCIPF on 2006-09-07 12:07:24 as ** along with 4 people bertelsen bobychan jfr aviad_work
  • Candidates for Novel RNA Topologies
    Journal of Molecular Biology, Vol. 341, No. 5. (27 August 2004), pp. 1129-1144.
    by Namhee Kim, Nahum Shiffeldrim, Hin H Gan, Tamar Schlick
    posted to bioinformatics classification clustering rna structure by marcius to the group BioinfoCIPF on 2006-05-19 22:17:31 as ** along with 2 people and 2 groups eckart_bindewald condon beta SGU-CIPF
  • BicAT: a biclustering analysis toolbox
    Bioinformatics, Vol. 22, No. 10. (15 May 2006), pp. 1282-1283.
    by Simon Barkow, Stefan Bleuler, Amela Prelic, Philip Zimmermann, Eckart Zitzler
    posted to classification clustering software by marcius to the group BioinfoCIPF on 2006-05-12 22:11:58 as ** along with 1 group SGU-CIPF
  • A new progressive-iterative algorithm for multiple structure alignment.
    Bioinformatics (7 June 2005)
    by Dmitry Lupyan, Alejandra Leo-Macias, Angel R R Ortiz
    posted to bioinformatics classification clustering structure_alignment by marcius to the group BioinfoCIPF on 2006-02-23 19:53:53 as ** along with 3 people and 3 groups tjimenez ana dimka structural_bioinformatics Bioinformatics SGU-CIPF
  • Protein function prediction via graph kernels.
    Bioinformatics, Vol. 21, No. suppl_1. (1 June 2005)
    by Karsten MM Borgwardt, Cheng, Stefan Schönauer, Sv NV Vishwanathan, Alex JJ Smola, Hans-Peter P Kriegel
    posted to bioinformatics classification clustering protein_function by marcius to the group BioinfoCIPF on 2006-02-17 20:36:39 as ** along with 7 people and 3 groups tmmurali okarsligil vavi lfriedl eweaver kt wnpx kdl Bioinformatics SGU-CIPF
  • Sequence-based heuristics for faster annotation of non-coding RNA families
    Bioinformatics, Vol. 22, No. 1. (1 January 2006), pp. 35-39.
    by Zasha Weinberg, Walter L Ruzzo
    posted to bioinformatics classification clustering ncrna by marcius to the group BioinfoCIPF on 2006-01-12 19:05:33 as ** along with 1 group SGU-CIPF
  • Structural similarity to bridge sequence space: finding new families on the bridges.
    Protein Sci, Vol. 14, No. 5. (May 2005), pp. 1305-1314.
    by PK Shah, P Aloy, P Bork, RB Russell
    posted to bioinformatics classification clustering protein_structure structural_genomics by marcius to the group BioinfoCIPF on 2005-10-28 19:11:21 as *** along with 2 people and 1 group eweaver drastic SGU-CIPF
  • Fragnostic: walking through protein structure space.
    Nucleic Acids Res, Vol. 33, No. Web Server issue. (1 July 2005)
    by I Friedberg, A Godzik
    posted to bioinformatics classification clustering protein_fragments protein_structure by marcius to the group BioinfoCIPF on 2005-10-23 09:49:10 as read along with 7 people and 3 groups ana barry pansapiens aalibes Einat alexg eweaver structural_bioinformatics Bioinformatics SGU-CIPF
  • Improvement of comparative model accuracy by free-energy optimization along principal components of natural structural variation.
    Proc Natl Acad Sci U S A, Vol. 101, No. 43. (26 October 2004), pp. 15346-15351.
    by B Qian, AR Ortiz, D Baker
    posted to biophysics clustering comparative_modeling protein_structure structure_prediction by marcius to the group BioinfoCIPF on 2005-10-22 05:00:32 as **** along with 4 people and 3 groups ana barry lna dgront structural_bioinformatics Bioinformatics SGU-CIPF
  • Data clustering: a review
    ACM Comput. Surv., Vol. 31, No. 3. (September 1999), pp. 264-323.
    by AK Jain, MN Murty, PJ Flynn
    posted to classification clustering machine_learning review by marcius to the group BioinfoCIPF on 2005-10-22 00:57:45 as ** along with 44 people and 13 groups iraklis tnhh flaviovdf dragonrez AbnerCYH mercutio egh ericyu karbak dgruiz pdlug thsant mapio mhay davidbrooks imouthesmp dfrankow rahul stagediver sterovetta sangeetha chadhogg sdvillal dgront styliani alexhofmann gane5h ianturton bigbossman perceptron allmensch aviad_work julianpan atbrew sugarexpletive KillianKay mkolar sajan dvisoin theodora jcsilva furykerry koles paulovn video_retrieval kdl GroupLens Bioinformatics SRL insilicodrug SGU-CIPF MScResearchRessources NDSiTransitRessources NDS106ProjectRessources NDSIntraVehicularResearch ahat Community_SSTZ
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