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Group: SGU-CIPF - with tag dna [10 articles]

Recent papers posted by members of the SGU-CIPF group with tag dna
  • Altered structural fluctuations in duplex RNA versus DNA: a conformational switch involving base pair opening.
    Nucleic Acids Res, Vol. 31, No. 24. (15 December 2003), pp. 7131-7140.
    by Y Pan, AD MacKerell
    posted to biophysics dna molecular_dynamics rna structure by marcius to the group SGU-CIPF on 2006-07-28 12:39:42 as ** along with 1 person and 1 group Elena_Zubova BioinfoCIPF
  • Three RNA cells for ribosomal lineages and three DNA viruses to replicate their genomes: a hypothesis for the origin of cellular domain.
    Proc Natl Acad Sci U S A, Vol. 103, No. 10. (7 March 2006), pp. 3669-3674.
    by P Forterre
    posted to biology dna evolution hypotesis rna virus by marcius to the group SGU-CIPF on 2006-04-27 18:01:25 as ** along with 3 people and 3 groups Retchless jwm brixtonmc Radiation_Damage Stressosome BioinfoCIPF
  • Calculating nucleic acid secondary structure.
    Curr Opin Struct Biol, Vol. 10, No. 3. (June 2000), pp. 303-310.
    by M Zuker
    posted to bioinformatics dna rna secondary_structure by marcius to the group SGU-CIPF on 2006-04-26 19:17:58 as ** along with 2 people and 1 group arcticrasta penka BioinfoCIPF
  • Predicting free energy landscapes for complexes of double-stranded chain molecules
    The Journal of Chemical Physics, Vol. 114, No. 9. (2001), pp. 4253-4266.
    by Wenbing Zhang, Shi J Chen
    posted to biophysics computational_biology dna folding rna by marcius to the group SGU-CIPF on 2006-04-21 22:11:14 as ** along with 1 person and 2 groups condon beta BioinfoCIPF
  • Theory for the conformational changes of double-stranded chain molecules
    The Journal of Chemical Physics, Vol. 109, No. 11. (1998), pp. 4602-4616.
    by Shi J Chen, Ken A Dill
    posted to biophysics computational_biology dna folding rna by marcius to the group SGU-CIPF on 2006-04-21 22:11:01 as ** along with 1 person and 2 groups condon beta BioinfoCIPF
  • Statistical thermodynamics of double-stranded polymer molecules
    The Journal of Chemical Physics, Vol. 103, No. 13. (1995), pp. 5802-5813.
    by Shi J Chen, Ken A Dill
    posted to biophysics computational_biology dna folding rna by marcius to the group SGU-CIPF on 2006-04-21 22:10:14 as ** along with 1 person and 2 groups condon beta BioinfoCIPF
  • Structural bioinformatics of DNA: a web-based tool for the analysis of molecular dynamics results and structure prediction
    Bioinformatics, Vol. 22, No. 8. (15 April 2006), pp. 1007-1009.
    by Surjit B Dixit, David L Beveridge
    posted to bioinformatics biophysics dna molecular_dynamics by marcius to the group SGU-CIPF on 2006-04-17 04:35:18 as ** along with 1 group BioinfoCIPF
  • The two ages of the RNA world, and the transition to the DNA world: a story of viruses and cells.
    Biochimie, Vol. 87, No. 9-10. (t 2005), pp. 793-803.
    by P Forterre
    posted to dna evolution rna by marcius to the group SGU-CIPF on 2006-01-27 01:19:04 as ** along with 3 people and 3 groups ruudvanleeuwen dchughes whastings G4ID BioinfoCIPF Genetics-of-Gambling
  • Origins of DNABase invaders
    Nature, Vol. 439, No. 7073. (11 January 2006), pp. 130-131.
    by John Whitfield
    posted to biology dna evolution rna virus by marcius to the group SGU-CIPF on 2006-01-12 19:16:15 as ** along with 2 people and 2 groups dayjm candypmcg FAB-lab BioinfoCIPF
  • The genome sequence of the malaria mosquito Anopheles gambiae.
    Science, Vol. 298, No. 5591. (4 October 2002), pp. 129-149.
    by RA Holt, GM Subramanian, A Halpern, GG Sutton, R Charlab, DR Nusskern, P Wincker, AG Clark, JM Ribeiro, R Wides, SL Salzberg, B Loftus, M Yandell, WH Majoros, DB Rusch, Z Lai, CL Kraft, JF Abril, V Anthouard, P Arensburger, PW Atkinson, H Baden, V de Berardinis, D Baldwin, V Benes, J Biedler, C Blass, R Bolanos, D Boscus, M Barnstead, S Cai, A Center, K Chaturverdi, GK Christophides, MA Chrystal, M Clamp, A Cravchik, V Curwen, A Dana, A Delcher, I Dew, CA Evans, M Flanigan, A Grundschober-Freimoser, L Friedli, Z Gu, P Guan, R Guigo, ME Hillenmeyer, SL Hladun, JR Hogan, YS Hong, J Hoover, O Jaillon, Z Ke, C Kodira, E Kokoza, A Koutsos, I Letunic, A Levitsky, Y Liang, JJ Lin, NF Lobo, JR Lopez, JA Malek, TC McIntosh, S Meister, J Miller, C Mobarry, E Mongin, SD Murphy, DA O'Brochta, C Pfannkoch, R Qi, MA Regier, K Remington, H Shao, MV Sharakhova, CD Sitter, J Shetty, TJ Smith, R Strong, J Sun, D Thomasova, LQ Ton, P Topalis, Z Tu, MF Unger, B Walenz, A Wang, J Wang, M Wang, X Wang, KJ Woodford, JR Wortman, M Wu, A Yao, EM Zdobnov, H Zhang, Q Zhao, S Zhao, SC Zhu, I Zhimulev, M Coluzzi, A della Torre, CW Roth, C Louis, F Kalush, RJ Mural, EW Myers, MD Adams, HO Smith, S Broder, MJ Gardner, CM Fraser, E Birney, P Bork, PT Brey, JC Venter, J Weissenbach, FC Kafatos, FH Collins, SL Hoffman
    posted to dna genome sequence by marcius to the group SGU-CIPF on 2005-10-23 09:50:49 as ** along with 7 people and 3 groups sdinka jwortman jmeppley meister1975 stajich niallhaslam Neeperando BioinfoCIPF Berkeley Mycology Notre Dame Bioinformatics
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