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Group: SGU-CIPF - with tag function [29 articles]

Recent papers posted by members of the SGU-CIPF group with tag function
  • Sequence comparison by sequence harmony identifies subtype-specific functional sites
    Nucleic Acids Research, Vol. 34, No. 22. (December 2006), pp. 6540-6548.
    by W Pirovano, KA Feenstra, J Heringa
    posted to bioinformatics classification function protein sequence_alignment by marcius to the group SGU-CIPF on 2007-01-03 13:02:03 as ** along with 2 people and 1 group sriram_s marti BioinfoCIPF
  • Principles of microRNA regulation of a human cellular signaling network.
    Mol Syst Biol, Vol. 2 (2006)
    by Q Cui, Z Yu, EO Purisima, E Wang
    posted to function genome human microrna by marcius to the group SGU-CIPF on 2006-10-04 12:53:03 as ** along with 7 people and 2 groups okarsligil jfr tardigrade mtagaya ealloza maralena bootsy Bioinformatics BioinfoCIPF
  • Sequence and structural differences between enzyme and nonenzyme homologs.
    Structure (Camb), Vol. 10, No. 10. (October 2002), pp. 1435-1451.
    by AE Todd, CA Orengo, JM Thornton
    posted to bioinformatics classification function protein by marcius to the group SGU-CIPF on 2006-09-13 15:36:46 as ** along with 1 person and 1 group matzke BioinfoCIPF
  • Mass spectrometry and the search for moonlighting proteins.
    Mass Spectrom Rev, Vol. 24, No. 6. (c 2005), pp. 772-782.
    by CJ Jeffery
    posted to function protein structure by marcius to the group SGU-CIPF on 2006-09-08 16:34:58 as ** along with 1 person and 1 group tny BioinfoCIPF
  • Gene3D: modelling protein structure, function and evolution.
    Nucleic Acids Res, Vol. 34, No. Database issue. (1 January 2006)
    by C Yeats, M Maibaum, R Marsden, M Dibley, D Lee, S Addou, CA Orengo
    posted to function protein server structure by marcius to the group SGU-CIPF on 2006-09-08 12:27:34 as ** along with 1 person and 1 group siebertm BioinfoCIPF
  • Exploiting protein structure data to explore the evolution of protein function and biological complexity.
    Philos Trans R Soc Lond B Biol Sci, Vol. 361, No. 1467. (29 March 2006), pp. 425-440.
    by RL Marsden, JA Ranea, A Sillero, O Redfern, C Yeats, M Maibaum, D Lee, S Addou, GA Reeves, TJ Dallman, CA Orengo
    posted to evolution function protein structure by marcius to the group SGU-CIPF on 2006-09-08 12:26:40 as ** along with 1 person and 1 group jsnoddy BioinfoCIPF
  • Choosing SNPs Using Feature Selection.
    Proc IEEE Comput Syst Bioinform Conf (2005), pp. 301-309.
    by TM Phuong, Z Lin, RB Altman
    posted to function prediction protein_structure snp by marcius to the group SGU-CIPF on 2006-09-07 17:40:06 as ** along with 1 group BioinfoCIPF
  • Structural characterization of proteins using residue environments.
    Proteins, Vol. 61, No. 4. (1 December 2005), pp. 741-747.
    by SD Mooney, MH Liang, R DeConde, RB Altman
    posted to function prediction protein_structure by marcius to the group SGU-CIPF on 2006-09-07 17:39:29 as ** along with 1 person and 1 group nickolay BioinfoCIPF
  • Persistently conserved positions in structurally similar, sequence dissimilar proteins: roles in preserving protein fold and function.
    Protein Sci, Vol. 11, No. 2. (February 2002), pp. 350-360.
    by I Friedberg, H Margalit
    posted to fold function prediction protein by marcius to the group SGU-CIPF on 2006-09-07 17:10:19 as ** along with 1 group BioinfoCIPF
  • New avenues in protein function prediction.
    Protein Sci, Vol. 15, No. 6. (June 2006), pp. 1527-1529.
    by I Friedberg, M Jambon, A Godzik
    posted to function prediction protein views by marcius to the group SGU-CIPF on 2006-09-07 17:09:26 as ** along with 4 people and 3 groups ana aalibes tjimenez topsan structural_bioinformatics Bioinformatics BioinfoCIPF
  • Automated protein function prediction--the genomic challenge.
    Brief Bioinform (23 May 2006)
    by Iddo Friedberg
    posted to function prediction protein views by marcius to the group SGU-CIPF on 2006-09-07 17:06:24 as ** along with 6 people and 2 groups tjimenez yas j3xucite cdallett sgoetz bootsy T_lab BioinfoCIPF
  • JAFA: a protein function annotation meta-server.
    Nucleic Acids Res, Vol. 34, No. Web Server issue. (1 July 2006)
    by I Friedberg, T Harder, A Godzik
    posted to function protein servers by marcius to the group SGU-CIPF on 2006-09-07 17:05:10 as ** along with 1 person and 1 group sgoetz BioinfoCIPF
  • BABELOMICS: a systems biology perspective in the functional annotation of genome-scale experiments.
    Nucleic Acids Res, Vol. 34, No. Web Server issue. (1 July 2006)
    by F Al-Shahrour, P Minguez, J Tárraga, D Montaner, E Alloza, JM Vaquerizas, L Conde, C Blaschke, J Vera, J Dopazo
    posted to bioinformatics function genome servers by marcius to the group SGU-CIPF on 2006-08-23 13:14:46 as ** along with 2 people and 1 group ealloza Garamonfok BioinfoCIPF
  • An RNA gene expressed during cortical development evolved rapidly in humans
    Nature (16 August 2006)
    by Katherine S Pollard, Sofie R Salama, Nelle Lambert, Marie-Alexandra Lambot, Sandra Coppens, Jakob S Pedersen, Sol Katzman, Bryan King, Courtney Onodera, Adam Siepel, Andrew D Kern, Colette Dehay, Haller Igel, Manuel Ares, Pierre Vanderhaeghen, David Haussler
    posted to evolution function rna by marcius to the group SGU-CIPF on 2006-08-23 09:49:50 as ** along with 13 people and 2 groups Ema carlfulp brian bpb nickluscombe larios joshuashen ealloza ce2benna lusk bpcusack nolodie rrhudson EBI-regulation BioinfoCIPF
  • A top-level ontology of functions and its application in the Open Biomedical Ontologies
    Bioinformatics, Vol. 22, No. 14. (July 2006), pp. e66-e73.
    by P Burek, R Hoehndorf, F Loebe, J Visagie, H Herre, J Kelso
    posted to classification function protein by marcius to the group SGU-CIPF on 2006-08-01 11:49:45 as ** along with 1 person and 1 group ealloza BioinfoCIPF
  • GENE REGULATION BY RIBOSWITCHES
    Nat Rev Mol Cell Biol, Vol. 5, No. 6. (June 2004), pp. 451-463.
    by Maumita Mandal, Ronald R Breaker
    posted to function genes ncrna review by marcius to the group SGU-CIPF on 2006-07-26 14:37:39 as ** along with 1 person and 1 group dayjm BioinfoCIPF
  • RNA allostery glimpsed
    Nature Structural & Molecular Biology, Vol. 13, No. 7., pp. 569-571.
    by Wade C Winkler, Charles E Dann
    posted to function rna structure by marcius to the group SGU-CIPF on 2006-07-18 12:28:51 as ** along with 1 group BioinfoCIPF
  • VirologyMicro mystery solution
    Nature, Vol. 442, No. 7098. (05 July 2006), pp. 33-34.
    by Bill Sugden
    posted to function microrna views by marcius to the group SGU-CIPF on 2006-07-06 09:46:18 as ** along with 1 group BioinfoCIPF
  • Anti-apoptotic function of a microRNA encoded by the HSV-1 latency-associated transcript
    Nature, Vol. 442, No. 7098. (31 May 2006), pp. 82-85.
    by A Gupta, JJ Gartner, P Sethupathy, AG Hatzigeorgiou, NW Fraser
    posted to function microrna by marcius to the group SGU-CIPF on 2006-07-06 09:45:18 as ** along with 3 people and 1 group 3times3 chenlc03 Carnegie BioinfoCIPF
  • RNA-mediated non-mendelian inheritance of an epigenetic change in the mouse
    Nature, Vol. 441, No. 7092., pp. 469-474.
    by Minoo Rassoulzadegan, Valã©rie Grandjean, Pierre Gounon, Stã©phane Vincent, Isabelle Gillot, Franã§ois Cuzin
    posted to function genome rna by marcius to the group SGU-CIPF on 2006-05-24 21:30:32 as ** along with 7 people and 8 groups dchughes mtagaya cmm neveaire klal epigenetics bpcusack Biostatistics Computational-Genomics Bioinformatics Neuroscience FAB-lab G4ID BioinfoCIPF Genetics-of-Gambling
  • Structure-guided recombination creates an artificial family of cytochromes p450.
    PLoS Biol, Vol. 4, No. 5. (May 2006)
    by CR Otey, M Landwehr, JB Endelman, K Hiraga, JD Bloom, FH Arnold
    posted to bioengineering function protein_fragments structure by marcius to the group SGU-CIPF on 2006-05-16 19:22:13 as ** along with 1 group BioinfoCIPF
  • Directed evolution of nucleic acid enzymes.
    Annu Rev Biochem, Vol. 73 (2004), pp. 791-836.
    by GF Joyce
    posted to bioengineering evolution function review rna by marcius to the group SGU-CIPF on 2006-05-15 22:38:36 as ** along with 3 people and 2 groups rklancer condon Hosna beta BioinfoCIPF
  • RNA synthetic biology
    Nature Biotechnology, Vol. 24, No. 5. (05 May 2006), pp. 545-554.
    by Farren J Isaacs, Daniel J Dwyer, James J Collins
    posted to bioengineering function rna by marcius to the group SGU-CIPF on 2006-05-07 20:55:02 as ** along with 6 people and 3 groups rklancer lingchong balabu dbikard austin grahamc BioinfoCIPF Centre de Recherches Interdisciplinaires SynBioSys
  • Engineered riboregulators enable post-transcriptional control of gene expression.
    Nat Biotechnol, Vol. 22, No. 7. (July 2004), pp. 841-847.
    by FJ Isaacs, DJ Dwyer, C Ding, DD Pervouchine, CR Cantor, JJ Collins
    posted to bioengineering function rna by marcius to the group SGU-CIPF on 2006-05-07 20:54:45 as ** along with 4 people and 2 groups rklancer BUiGEM dbikard austin BUiGEM BioinfoCIPF
  • The Functional Genomics of Noncoding RNA
    Science, Vol. 309, No. 5740. (02 September 2005), pp. 1527-1528.
    by John S Mattick
    posted to function genome ncrna review by marcius to the group SGU-CIPF on 2006-04-11 20:04:42 as ** along with 10 people and 7 groups biozhang2001 lyongu alexg eckart_bindewald dchughes mtagaya cmm neveaire bsmagic jayster4 Biostatistics Computational-Genomics Bioinformatics Neuroscience FAB-lab BioinfoCIPF bioinplant
  • Predicting candidate genomic sequences that correspond to synthetic functional RNA motifs.
    Nucleic Acids Res, Vol. 33, No. 18. (2005), pp. 6057-6069.
    by U Laserson, HH Gan, T Schlick
    posted to computational_biology function genome ncrna rna by marcius to the group SGU-CIPF on 2006-03-06 22:49:02 as ** along with 1 group BioinfoCIPF
  • MicroRNAs in cell proliferation, cell death, and tumorigenesis
    British Journal of Cancer, Vol. aop, No. current. (21 February 2006)
    by HW Hwang, JT Mendell
    posted to function microarray review by marcius to the group SGU-CIPF on 2006-03-02 01:06:23 as ** along with 3 people and 4 groups ajeffs andersbj dchughes microRNA G4ID BioinfoCIPF Genetics-of-Gambling
  • Introns and the origin of nucleus-cytosol compartmentalization
    Nature, Vol. 440, No. 7080., pp. 41-45.
    by William Martin, Eugene V Koonin
    posted to evolution function hypotesis by marcius to the group SGU-CIPF on 2006-03-01 22:57:08 as ** along with 5 people and 3 groups lyenh dayjm bala tny penka Nie BioinfoCIPF DictyosteliumGroup
  • New catalytic structures from an existing ribozyme
    Nature Structural & Molecular Biology, Vol. 12, No. 11. (09 October 2005), pp. 994-1000.
    by Edward A Curtis, David P Bartel
    posted to function ncrna ribozyme rna by marcius to the group SGU-CIPF on 2006-02-27 23:17:12 as ** along with 1 person and 2 groups condon beta BioinfoCIPF
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