Register | Log in | FAQ      [?] 
Recent | Recommended | Search | Authors | Tags | Export

Group: SGU-CIPF - with tag model_assessment [19 articles]

Recent papers posted by members of the SGU-CIPF group with tag model_assessment
  • Long- and short-range interactions in native protein structures are consistent/minimally frustrated in sequence space.
    Proteins, Vol. 50, No. 1. (1 January 2003), pp. 35-43.
    by S Miyazawa, RL Jernigan
    posted to computational_biology model_assessment statistical_potentials by marcius to the group SGU-CIPF on 2006-03-07 18:44:30 as ** along with 1 person and 3 groups ana structural_bioinformatics Bioinformatics BioinfoCIPF
  • Knowledge-based potential functions in protein design.
    Curr Opin Struct Biol, Vol. 12, No. 4. (August 2002), pp. 447-452.
    by WP Russ, R Ranganathan
    posted to biophysics model_assessment protein_structure review by marcius to the group SGU-CIPF on 2006-01-20 23:02:36 as ** along with 1 person and 1 group gbart BioinfoCIPF
  • Database-derived potentials dependent on protein size for in silico folding and design.
    Biophys J, Vol. 87, No. 1. (July 2004), pp. 171-181.
    by Y Dehouck, D Gilis, M Rooman
    posted to computational_biology model_assessment by marcius to the group SGU-CIPF on 2006-01-20 22:59:04 as ** along with 1 group BioinfoCIPF
  • An information theoretic approach to macromolecular modeling: I. Sequence alignments.
    Biophys J, Vol. 89, No. 5. (November 2005), pp. 2998-3007.
    by T Aynechi, ID Kuntz
    posted to bioinformatics biophysics model_assessment sequence_alignment by marcius to the group SGU-CIPF on 2006-01-20 22:56:59 as ** along with 1 person and 1 group nickolay BioinfoCIPF
  • An Information Theoretic Approach to Macromolecular Modeling: II. Force Fields.
    Biophys J, Vol. 89, No. 5. (November 2005), pp. 3008-3016.
    by T Aynechi, ID Kuntz
    posted to bioinformatics biophysics computational_biology model_assessment molecular_dynamics by marcius to the group SGU-CIPF on 2006-01-20 22:54:26 as ** along with 1 person and 1 group nickolay BioinfoCIPF
  • Prediction of protein thermostability with a direction- and distance-dependent knowledge-based potential.
    Protein Sci, Vol. 14, No. 10. (October 2005), pp. 2682-2692.
    by C Hoppe, D Schomburg
    posted to model_assessment protein_structure protein_threading by marcius to the group SGU-CIPF on 2006-01-19 19:51:53 as ** along with 1 group BioinfoCIPF
  • Improving sequence-based fold recognition by using 3D model quality assessment.
    Bioinformatics, Vol. 21, No. 17. (1 September 2005), pp. 3509-3515.
    by CS Pettitt, LJ McGuffin, DT Jones
    posted to biophysics model_assessment protein_threading by marcius to the group SGU-CIPF on 2006-01-13 23:57:18 as ** along with 1 group BioinfoCIPF
  • Automatic assessment of alignment quality
    Nucleic Acids Research, Vol. 33, No. 22. (2005), pp. 7120-7128.
    by Timo Lassmann, Erik L Sonnhammer
    posted to bioinformatics model_assessment sequence_alignment by marcius to the group SGU-CIPF on 2006-01-12 19:11:40 as ** along with 1 person and 1 group BioNica BioinfoCIPF
  • Practical lessons from protein structure prediction.
    Nucleic Acids Res, Vol. 33, No. 6. (2005), pp. 1874-1891.
    by K Ginalski, NV Grishin, A Godzik, L Rychlewski
    posted to cafasp casp comparative_modeling model_assessment structure_prediction by marcius to the group SGU-CIPF on 2005-12-22 06:53:06 as ** along with 7 people and 3 groups ana aalibes thaliana okarsligil duartemolha dgront mirzazadeh structural_bioinformatics Bioinformatics BioinfoCIPF
  • Generalized protein structure prediction based on combination of fold-recognition with de novo folding and evaluation of models.
    Proteins (26 September 2005)
    by Andrzej Koliński, Janusz M M Bujnicki
    posted to ab-initio bioinformatics comparative_modeling model_assessment structure_prediction by marcius to the group SGU-CIPF on 2005-10-22 09:12:12 as *** along with 2 people and 1 group nigham dgront BioinfoCIPF
  • Protein structure prediction using a variety of profile libraries and 3D verification.
    Proteins (26 September 2005)
    by Kentaro Tomii, Takatsugu Hirokawa, Chie Motono
    posted to bioinformatics cafasp casp model_assessment structure_prediction by marcius to the group SGU-CIPF on 2005-10-22 09:11:09 as ** along with 1 group BioinfoCIPF
  • TASSER: An automated method for the prediction of protein tertiary structures in CASP6.
    Proteins (26 September 2005)
    by Yang Zhang, Adrian K K Arakaki, Jeffrey Skolnick
    posted to cafasp casp model_assessment structure_alignment by marcius to the group SGU-CIPF on 2005-10-22 08:58:50 as ** along with 4 people and 1 group nigham dgront schuylrp mirzazadeh BioinfoCIPF
  • Prediction of novel and analogous folds using fragment assembly and fold recognition.
    Proteins (26 September 2005)
    by D T T Jones, K Bryson, A Coleman, L J J McGuffin, M I I Sadowski, J S S Sodhi, J J J Ward
    posted to cafasp casp comparative_modeling model_assessment protein_fragments protein_structure structure_prediction by marcius to the group SGU-CIPF on 2005-10-22 08:57:29 as **** along with 1 group BioinfoCIPF
  • SPARKS 2 and SP(3) servers in CASP 6.
    Proteins (26 September 2005)
    by Hongyi Zhou, Yaoqi Zhou
    posted to cafasp casp comparative_modeling model_assessment protein_structure structure_prediction by marcius to the group SGU-CIPF on 2005-10-22 08:56:27 as *** along with 1 person and 1 group j3xucite BioinfoCIPF
  • Scoring function for automated assessment of protein structure template quality
    Proteins: Structure, Function, and Bioinformatics, Vol. 57, No. 4., pp. 702-710.
    by Yang Zhang, Jeffrey Skolnick
    posted to computational_biology model_assessment protein_structure by marcius to the group SGU-CIPF on 2005-10-21 21:55:27 as * along with 5 people and 1 group karbak dgront aengisch rabio granujilla BioinfoCIPF
  • Can correct protein models be identified?
    Protein Sci, Vol. 12, No. 5. (May 2003), pp. 1073-1086.
    by B Wallner, A Elofsson
    posted to cafasp casp model_assessment by marcius to the group SGU-CIPF on 2005-10-21 21:10:50 as ** along with 1 person and 1 group j3xucite BioinfoCIPF
  • Discrimination of native loop conformations in membrane proteins: decoy library design and evaluation of effective energy scoring functions.
    Proteins, Vol. 52, No. 4. (1 September 2003), pp. 492-509.
    by LR Forrest, TB Woolf
    posted to computational_biology model_assessment protein_structure software by marcius to the group SGU-CIPF on 2005-10-21 21:08:44 as * along with 1 person and 1 group thaliana BioinfoCIPF
  • Effective energy function for proteins in solution.
    Proteins, Vol. 35, No. 2. (1 May 1999), pp. 133-152.
    by T Lazaridis, M Karplus
    posted to computational_biology model_assessment protein_folding software by marcius to the group SGU-CIPF on 2005-10-21 21:08:08 as *** along with 4 people and 1 group bluvsh1 choonpeng hmk kgutwin BioinfoCIPF
  • Derivation of protein-specific pair potentials based on weak sequence fragment similarity.
    Proteins, Vol. 38, No. 1. (1 January 2000), pp. 3-16.
    by J Skolnick, A Kolinski, A Ortiz
    posted to biophysics model_assessment statistical_potentials by marcius to the group SGU-CIPF on 2005-10-21 20:27:37 as ***** along with 2 people and 1 group dgront mcbla BioinfoCIPF
    • Note: You may cite this page as: http://www.citeulike.org/group/1570/tag/model_assessment

    RIS BibTeX
    CiteULike organises scholarly (or academic) papers or literature and provides bibliographic (which means it makes bibliographies) for universities and higher education establishments. It helps undergraduates and postgraduates. People studying for PhDs or in postdoctoral (postdoc) positions. The service is similar in scope to EndNote or RefWorks or any other reference manager like BibTeX, but it is a social bookmarking service for scientists and humanities researchers.