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Group: SGU-CIPF - with tag review [127 articles]

Recent papers posted by members of the SGU-CIPF group with tag review
  • RNA structure: experimental analysis.
    Curr Opin Microbiol (24 May 2007)
    by Brice Felden
  • Structural proteomics: from the molecule to the system
    Nature Structural & Molecular Biology, Vol. 14, No. 1., pp. 3-4.
    by Lucia Banci, Wolfgang Baumeister, Josefina Enfedaque, Udo Heinemann, Gunter Schneider, Israel Silman, Joel L Sussman
  • RNAs everywhere: genome-wide annotation of structured RNAs.
    J Exp Zoolog B Mol Dev Evol (14 December 2006)
    by Rolf Backofen, Stephan H H Bernhart, Christoph Flamm, Claudia Fried, Guido Fritzsch, Jörg Hackermüller, Jana Hertel, Ivo L L Hofacker, Kristin Missal, Axel Mosig, Sonja J J Prohaska, Dominic Rose, Peter F F Stadler, Andrea Tanzer, Stefan Washietl, Sebastian Will
  • RNA structure: the long and the short of it.
    Curr Opin Struct Biol, Vol. 15, No. 3. (June 2005), pp. 302-308.
    by SR Holbrook
  • Synthetic biology--putting engineering into biology
    Bioinformatics, Vol. 22, No. 22. (15 November 2006), pp. 2790-2799.
    by Matthias Heinemann, Sven Panke
  • RNA structures and folding: from conventional to new issues in structure predictions.
    Curr Opin Struct Biol, Vol. 7, No. 2. (April 1997), pp. 229-235.
    by P Schuster, PF Stadler, A Renner
  • NMR spectroscopy of RNA.
    Chembiochem, Vol. 4, No. 10. (6 October 2003), pp. 936-962.
    posted to nmr review rna by marcius to the group SGU-CIPF on 2006-10-22 12:10:22 as ** along with 1 group BioinfoCIPF
  • Mapping protein-protein interactions in solution by NMR spectroscopy.
    Biochemistry, Vol. 41, No. 1. (8 January 2002), pp. 1-7.
    by ER Zuiderweg
  • Virtual drug discovery and development for neglected diseases through public-private partnerships.
    Nat Rev Drug Discov, Vol. 2, No. 11. (November 2003), pp. 919-928.
    by S Nwaka, RG Ridley
    posted to discovery disease drug review views by marcius to the group SGU-CIPF on 2006-10-21 15:23:40 as ** along with 1 group BioinfoCIPF
  • Antimalarial drug discovery: efficacy models for compound screening.
    Nat Rev Drug Discov, Vol. 3, No. 6. (June 2004), pp. 509-520.
    by DA Fidock, PJ Rosenthal, SL Croft, R Brun, S Nwaka
    posted to discovery disease drug review views by marcius to the group SGU-CIPF on 2006-10-21 15:22:59 as ** along with 1 group BioinfoCIPF
  • Drug discovery and beyond: the role of public-private partnerships in improving access to new malaria medicines
    Transactions of the Royal Society of Tropical Medicine and Hygiene, Vol. 99, No. Supplement 1. (2005), pp. 20-29.
    by Solomon Nwaka
  • Structural bioinformatic approaches to the discovery of new antimycobacterial drugs.
    Curr Pharm Des, Vol. 10, No. 26. (2004), pp. 3195-3211.
    posted to bioinformatics docking drug ligand protein review by marcius to the group SGU-CIPF on 2006-10-21 14:23:24 as ** along with 1 group BioinfoCIPF
  • Virtual screening in structure-based drug discovery.
    Mini Rev Med Chem, Vol. 4, No. 7. (September 2004), pp. 779-791.
    by X Barril, RE Hubbard, SD Morley
    posted to algorithms docking drug ligand protein review by marcius to the group SGU-CIPF on 2006-10-21 14:22:35 as ** along with 1 group BioinfoCIPF
  • Virtual screening in lead discovery and optimization.
    Curr Opin Drug Discov Devel, Vol. 7, No. 4. (July 2004), pp. 396-403.
    by AN Jain
    posted to algorithms docking drug ligand protein review by marcius to the group SGU-CIPF on 2006-10-21 14:21:52 as ** along with 1 group BioinfoCIPF
  • Technological advances in high-throughput screening.
    Am J Pharmacogenomics, Vol. 4, No. 4. (2004), pp. 263-276.
    by B Liu, S Li, J Hu
    posted to hts review by marcius to the group SGU-CIPF on 2006-10-21 14:19:20 as ** along with 1 group BioinfoCIPF
  • Docking and scoring in virtual screening for drug discovery: methods and applications.
    Nat Rev Drug Discov, Vol. 3, No. 11. (November 2004), pp. 935-949.
    by DB Kitchen, H Decornez, JR Furr, J Bajorath
  • A detailed comparison of current docking and scoring methods on systems of pharmaceutical relevance.
    Proteins, Vol. 56, No. 2. (1 August 2004), pp. 235-249.
    by E Perola, WP Walters, PS Charifson
  • Current status of virtual screening as analysed by target class.
    Med Chem, Vol. 2, No. 1. (January 2006), pp. 89-112.
    by MJ Stoermer
  • Recent development and application of virtual screening in drug discovery: an overview.
    Curr Pharm Des, Vol. 10, No. 9. (2004), pp. 1011-1033.
    by T Hou, X Xu
    posted to algorithms docking drug ligand protein review by marcius to the group SGU-CIPF on 2006-10-21 14:12:44 as ** along with 1 group BioinfoCIPF
  • A review of protein-small molecule docking methods.
    J Comput Aided Mol Des, Vol. 16, No. 3. (March 2002), pp. 151-166.
    by RD Taylor, PJ Jewsbury, JW Essex
  • Computational tools for protein modeling.
    Curr Protein Pept Sci, Vol. 1, No. 1. (July 2000), pp. 1-21.
    by D Xu, Y Xu, EC Uberbacher
    posted to algorithms protein review by marcius to the group SGU-CIPF on 2006-10-21 14:10:31 as ** along with 1 person and 1 group granujilla BioinfoCIPF
  • Modelling and simulation: a computational perspective in anticancer drug discovery.
    Curr Med Chem Anticancer Agents, Vol. 4, No. 5. (September 2004), pp. 401-403.
    by F Gago
  • Docking: successes and challenges.
    Curr Pharm Des, Vol. 11, No. 3. (2005), pp. 323-333.
    by V Mohan, AC Gibbs, MD Cummings, EP Jaeger, RL DesJarlais
  • New methodologies for ligand-based virtual screening.
    Curr Pharm Des, Vol. 11, No. 9. (2005), pp. 1189-1202.
    by FL Stahura, J Bajorath
  • Evaluation of docking performance: comparative data on docking algorithms.
    J Med Chem, Vol. 47, No. 3. (29 January 2004), pp. 558-565.
  • Cell biology: Brief encounters bolster contacts
    Nature (15 October 2006)
    by Tom L Blundell, Juan Fernández-Recio
  • Recent advances in the development and application of implicit solvent models in biomolecule simulations.
    Curr Opin Struct Biol, Vol. 14, No. 2. (April 2004), pp. 217-224.
    by M Feig, CL Brooks
  • Effective energy functions for protein structure prediction.
    Curr Opin Struct Biol, Vol. 10, No. 2. (April 2000), pp. 139-145.
  • Empirical force fields for biological macromolecules: Overview and issues
    Journal of Computational Chemistry, Vol. 25, No. 13. (1 July 2004), pp. 1584-1604.
    by Alexander D Mackerell
  • Force fields for protein simulations.
    Adv Protein Chem, Vol. 66 (2003), pp. 27-85.
    by JW Ponder, DA Case
  • Thermodynamics of protein folding: a microscopic view.
    Biophys Chem, Vol. 100, No. 1-3. (2003), pp. 367-395.
  • Computational methods for RNA structure determination.
    Curr Opin Struct Biol, Vol. 11, No. 3. (June 2001), pp. 282-286.
    by F Major, R Griffey
  • Progress of structural genomics initiatives: an analysis of solved target structures.
    J Mol Biol, Vol. 348, No. 5. (20 May 2005), pp. 1235-1260.
    by AE Todd, RL Marsden, JM Thornton, CA Orengo
    posted to review structural_genomics by marcius to the group SGU-CIPF on 2006-09-08 12:28:45 as ** along with 2 people and 1 group jwm bicko BioinfoCIPF
  • Protein families and their evolution-a structural perspective.
    Annu Rev Biochem, Vol. 74 (2005), pp. 867-900.
    by CA Orengo, JM Thornton
  • How do RNA folding algorithms work?
    Nature Biotechnology, Vol. 22, No. 11., 1457.
    by Sean R Eddy
  • Partitioning Protein Structures into Domains: Why Is it so Difficult?
    Journal of Molecular Biology, Vol. 361, No. 3. (18 August 2006), pp. 562-590.
    by Timothy A Holland, Stella Veretnik, Ilya N Shindyalov, Philip E Bourne
  • Revolutions in RNA Secondary Structure Prediction
    Journal of Molecular Biology, Vol. 359, No. 3. (9 June 2006), pp. 526-532.
    by David H Mathews
  • Structure and dynamics of ribosomal RNA.
    Curr Opin Struct Biol, Vol. 8, No. 3. (June 1998), pp. 294-300.
    by SA Woodson, NB Leontis
    posted to review rna structure by marcius to the group SGU-CIPF on 2006-09-06 10:33:29 as ** along with 1 group BioinfoCIPF
  • Conserved geometrical base-pairing patterns in RNA.
    Q Rev Biophys, Vol. 31, No. 4. (November 1998), pp. 399-455.
    by NB Leontis, E Westhof
    posted to review rna structure by marcius to the group SGU-CIPF on 2006-09-06 10:33:20 as ** along with 1 group BioinfoCIPF
  • The Rna World (Cold Spring Harbor Monograph Series) (Cold Spring Harbor Monograph Series)
    (14 October 2005)
    by Thomas R Cech, John F Atkins
    posted to evolution review rna by marcius to the group SGU-CIPF on 2006-08-24 15:31:06 as ** along with 1 person and 1 group tardigrade BioinfoCIPF
  • RNA silencing
    Trends in Biochemical Sciences, Vol. 30, No. 6. (June 2005), pp. 290-293.
    by David Baulcombe
    posted to ncrna review by marcius to the group SGU-CIPF on 2006-08-23 13:30:40 as ** along with 2 people and 2 groups tardigrade cdawson BioinfoCIPF GIG
  • Structural biology: Antiviral drugs fit for a purpose
    Nature (16 August 2006)
    by Ming Luo
    posted to drug review structure views virus by marcius to the group SGU-CIPF on 2006-08-23 13:20:14 as ** along with 1 group BioinfoCIPF
  • RNA Structure: Reading the Ribosome
    Science, Vol. 309, No. 5740. (02 September 2005), pp. 1508-1514.
    by Harry F Noller
  • Cell biology. A matter of life or death.
    Science, Vol. 299, No. 5613. (14 March 2003), pp. 1677-1679.
    posted to review views by marcius to the group SGU-CIPF on 2006-08-09 16:39:05 as ** along with 1 group BioinfoCIPF
  • Knowledge-based potentials in protein design
    Current Opinion in Structural Biology, Vol. 16, No. 4. (August 2006), pp. 508-513.
    by Alan M Poole, Rama Ranganathan
  • MicroRNA-Cancer Connection: The Beginning of a New Tale
    Cancer Res, Vol. 66, No. 15. (1 August 2006), pp. 7390-7394.
    by George A Calin, Carlo M Croce
  • MOLECULAR BIOLOGY: A New RNA Dimension to Genome Control.
    Science, Vol. 313, No. 5785. (21 July 2006), pp. 305-306.
    by RW Carthew
  • RNA as a drug target: chemical, modelling, and evolutionary tools.
    Curr Opin Biotechnol, Vol. 9, No. 1. (February 1998), pp. 66-73.
    posted to disease docking drug review rna by marcius to the group SGU-CIPF on 2006-08-01 11:46:07 as ** along with 1 group BioinfoCIPF
  • Targeting RNA with small molecules.
    Curr Med Chem, Vol. 7, No. 1. (January 2000), pp. 73-98.
    by WD Wilson, K Li
    posted to disease docking drug review rna by marcius to the group SGU-CIPF on 2006-08-01 11:44:58 as ** along with 1 group BioinfoCIPF
  • GENE REGULATION BY RIBOSWITCHES
    Nat Rev Mol Cell Biol, Vol. 5, No. 6. (June 2004), pp. 451-463.
    by Maumita Mandal, Ronald R Breaker
    posted to function genes ncrna review by marcius to the group SGU-CIPF on 2006-07-26 14:37:39 as ** along with 1 person and 1 group dayjm BioinfoCIPF
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