Group: steinmetzlab - with tag bioinformatics [22 articles] Export

Recent papers posted by members of the steinmetzlab group with tag bioinformatics

	Maximizing the potential of functional genomics. [My Copy] Nat Rev Genet, Vol. 5, No. 3. (March 2004), pp. 190-201. by L. M. Steinmetz, R. W. Davis posted to review integration genomics bioinformatics by raiyar to the group steinmetzlab on 2007-09-12 21:26:03 as
	Genome sequencing and comparative analysis of Saccharomyces cerevisiae strain YJM789 [My Copy] Proceedings of the National Academy of Sciences, Vol. 104, No. 31. (31 July 2007), pp. 12825-12830. by Wu Wei, John H. Mccusker, Richard W. Hyman, et al.Ted Jones, Ye Ning, Zhiwei Cao, Zhenglong Gu, Dan Bruno, Molly Miranda, Michelle Nguyen, Julie Wilhelmy, Caridad Komp, Raquel Tamse, Xiaojing Wang, Peilin Jia, Philippe Luedi, Peter J. Oefner, Lior David, Fred S. Dietrich, Yixue Li, Ronald W. Davis, Lars M. Steinmetz posted to yjm789 yeast genomics bioinformatics by raiyar to the group steinmetzlab on 2007-08-02 16:15:02 as along with 5 people and 1 group dbensasson waszak lesander lp2 dmc Durbin group
	Network analysis of FDA approved drugs and their targets. [My Copy] The Mount Sinai journal of medicine, New York, Vol. 74, No. 1. (April 2007), pp. 27-32. by Avi Ma'ayan, Sherry L. Jenkins, Joseph Goldfarb, Ravi Iyengar posted to network compound bioinformatics analysis by raiyar to the group steinmetzlab on 2007-06-27 07:18:07 as along with 2 people egonw guhjy
	Evaluation of predicted network modules in yeast metabolism using NMR-based metabolite profiling. [My Copy] Genome Res, Vol. 17, No. 4. (April 2007), pp. 510-519. by J. G. Bundy, B. Papp, R. Harmston, et al.R. A. Browne, E. M. Clayson, N. Burton, R. J. Reece, S. G. Oliver, K. M. Brindle posted to yeast technique prediction network model metabolic_profiling deletion bioinformatics by raiyar to the group steinmetzlab on 2007-06-08 09:33:01 as along with 2 people fishtank alexg
	The human disease network. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 104, No. 21. (22 May 2007), pp. 8685-8690. by Kwang-Il I. Goh, Michael E. Cusick, David Valle, Barton Childs, Marc Vidal, Albert-László L. Barabási posted to systems statistics network integration genomics disease bioinformatics analysis by raiyar to the group steinmetzlab on 2007-05-27 00:38:43 as along with 40 people and 8 groups frohike robfsouza bertelsen smichan biomcgary pawelsobko CurAbility Scis0000002 qluo cbforrest daforerog nedwards Dulcinea saket kaarsinogen roys Yanno guhjy aalibes cannin kuhn jfr yas balicea neveaire bundschu grahamc joepickrell leSyl henning dejori xingxu winterschlaefer naegele shoshin shikin nolodie mingzhi carlk yaredo Network Analysis of Genes Regulated in Renal Diseases Biostatistics Computational-Genomics Bioinformatics Neuroscience ic4 generif_paper GomezLab
	Integrated Genomic and Proteomic Analyses of a Systematically Perturbed Metabolic Network [My Copy] Science In Science, Vol. 292, No. 5518. (4 May 2001), pp. 929-934. by Trey Ideker, Vesteinn Thorsson, Jeffrey A. Ranish, et al.Rowan Christmas, Jeremy Buhler, Jimmy K. Eng, Roger Bumgarner, David R. Goodlett, Ruedi Aebersold, Leroy Hood posted to yeast systems proteomics network model integration genomics expression deletion bioinformatics array analysis by raiyar to the group steinmetzlab on 2007-05-26 18:25:14 as along with 15 people and 2 groups dadiamah pmendes myzhang rsaito isimpson snuppepuppan BioGeek dragonrez bpb okarsligil opheliav wnpx gurkanbebek thomaskelder shikin Bioinformatics GeneGo
	High-throughput classification of yeast mutants for functional genomics using metabolic footprinting. [My Copy] Nat Biotechnol, Vol. 21, No. 6. (June 2003), pp. 692-696. by J. Allen, H. M. Davey, D. Broadhurst, et al.J. K. Heald, J. J. Rowland, S. G. Oliver, D. B. Kell posted to yeast systems metabolic_profiling integration genomics expression deletion defect bioinformatics analysis by raiyar to the group steinmetzlab on 2007-05-18 16:06:54 as along with 4 people and 2 groups peterli dbk irenas katerinakal streptomyces dbk-lab
	A functional genomics strategy that uses metabolome data to reveal the phenotype of silent mutations. [My Copy] Nature biotechnology, Vol. 19, No. 1. (January 2001), pp. 45-50. by L. M. Raamsdonk, B. Teusink, D. Broadhurst, et al.N. Zhang, A. Hayes, M. C. Walsh, J. A. Berden, K. M. Brindle, D. B. Kell, J. J. Rowland, H. V. Westerhoff, K. van Dam, S. G. Oliver posted to yeast metabolic_profiling integration ht deletion defect bioinformatics analysis by raiyar to the group steinmetzlab on 2007-05-18 16:05:35 as along with 8 people and 2 groups michaelbarton Garth_9145 czeller dbk irenas dullhunk katerinakal JeremyZucker streptomyces dbk-lab
	Building the power house: recent advances in mitochondrial studies through proteomics and systems biology. [My Copy] Am J Physiol Cell Physiol, Vol. 292, No. 1. (January 2007) by T. D. Vo, B. O. Palsson posted to systems review proteomics mitochondria bioinformatics by raiyar to the group steinmetzlab on 2007-05-14 16:54:33 as along with 2 people guhjy kristen
	Reconstruction and functional characterization of the human mitochondrial metabolic network based on proteomic and biochemical data. [My Copy] J Biol Chem, Vol. 279, No. 38. (17 September 2004), pp. 39532-39540. by T. D. Vo, H. J. Greenberg, B. O. Palsson posted to systems mitochondria metabolic_profiling human ht flux bioinformatics by raiyar to the group steinmetzlab on 2007-05-14 14:18:48 as along with 1 person kristen
	The genetic code is nearly optimal for allowing additional information within protein-coding sequences. [My Copy] Genome Res (9 February 2007) by Shalev Itzkovitz, Uri Alon posted to interest genetic bioinformatics by raiyar to the group steinmetzlab on 2007-05-14 08:57:03 as along with 10 people and 1 group kirasato gpalidwor madhadron msierk grahamc raylim Minty gwenknight bpcusack ptrobajo Bioinformatics
	Multiscale Modeling of Cardiac Cellular Energetics [My Copy] Ann NY Acad Sci, Vol. 1047, No. 1. (1 June 2005), pp. 395-426. by James B. Bassingthwaighte, Howard J. Chizeck, Les E. Atlas, Hong Qian posted to respiration model mitochondria bioinformatics by raiyar to the group steinmetzlab on 2007-05-13 13:59:08 as
	The need for standards, not guidelines, in biological data reporting and sharing. [My Copy] Nature biotechnology, Vol. 24, No. 11. (November 2006), pp. 1369-1373. by Lyle D. Burgoon posted to review interest integration bioinformatics by raiyar to the group steinmetzlab on 2007-04-27 11:15:24 as along with 4 people daforerog smichan mhucka jfr
	Systems Biology Toolbox for MATLAB: a computational platform for research in systems biology [My Copy] Bioinformatics, Vol. 22, No. 4. (15 February 2006), pp. 514-515. by Henning Schmidt, Mats Jirstrand posted to technique systems network model bioinformatics by raiyar to the group steinmetzlab on 2007-04-26 09:40:20 as along with 3 people and 1 group joseph_x_zhou julius jrbanga SysbioMPI-TCells
	Bringing metabolic networks to life: integration of kinetic, metabolic, and proteomic data [My Copy] Theoretical Biology and Medical Modelling, Vol. 3 (15 December 2006), 42. by Wolfram Liebermeister, Edda Klipp posted to technique systems statistics prediction network model metabolic flux bioinformatics by raiyar to the group steinmetzlab on 2007-04-23 16:54:29 as along with 5 people lflorez guhjy wnpx fishtank jrbanga
	Dynamic modelling and analysis of biochemical networks: mechanism-based models and model-based experiments. [My Copy] Briefings in bioinformatics, Vol. 7, No. 4. (1 December 2006), pp. 364-374. by Natal A. van Riel posted to technique systems review prediction network model metabolic bioinformatics by raiyar to the group steinmetzlab on 2007-04-23 15:48:44 as along with 4 people bertelsen abhishek_tiwari wnpx fishtank
	Uncovering transcriptional regulation of metabolism by using metabolic network topology [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 102, No. 8. (22 February 2005), pp. 2685-2689. by Kiran R. Patil, Jens Nielsen posted to transcription regulation network model metabolic bioinformatics by raiyar to the group steinmetzlab on 2007-03-22 12:52:55 as along with 2 people kukki alexg
	Isotopomer analysis of myocardial substrate metabolism: a systems biology approach. [My Copy] Biotechnol Bioeng, Vol. 95, No. 5. (5 December 2006), pp. 972-983. by T. D. Vo, B. O. Palsson posted to systems respiration model mitochondria metabolic bioinformatics by raiyar to the group steinmetzlab on 2007-03-21 13:06:49 as
	Systems analysis of energy metabolism elucidates the affected respiratory chain complex in Leigh's syndrome [My Copy] Molecular Genetics and Metabolism, Vol. In Press, Corrected Proof by Thuy D. Vo, Paul, Bernhard O. Palsson posted to systems network model metabolic disease bioinformatics by raiyar to the group steinmetzlab on 2007-03-21 12:53:19 as
	Key biology databases go wiki [My Copy] Nature, Vol. 445, No. 7129. (14 February 2007), pp. 691-691. by Jim Giles posted to bioinformatics interest by raiyar to the group steinmetzlab on 2007-02-15 10:57:53 as along with 10 people and 5 groups druvus guhjy marcius eweaver kehan grahamc leechuck PunkRock barriot mircea biodiversity_conservation Bioinformatics BioinfoCIPF SGU-CIPF GrassBase
	Metabolic flux balance analysis and the in silico analysis of Escherichia coli K-12 gene deletions [My Copy] BMC Bioinformatics, Vol. 1, No. 1. (2000), pp. 1-1. by Jeremy S. Edwards, Bernhard O. Palsson posted to parts-list network mutant model genes flux deletion bioinformatics analysis by raiyar to the group steinmetzlab on 2007-01-25 11:29:42 as along with 2 people and 1 group winterstream icases TNT
	Metabolic modeling of microbial strains in silico. [My Copy] Trends Biochem Sci, Vol. 26, No. 3. (March 2001), pp. 179-186. by M. W. Covert, C. H. Schilling, I. Famili, et al.J. S. Edwards, I. I. Goryanin, E. Selkov, B. O. Palsson posted to systems review network model metabolic integration flux bioinformatics by raiyar to the group steinmetzlab on 2007-01-24 17:05:10 as along with 2 people and 1 group peterli icases TNT

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software	453
genomics	355
rna	320
review	308
evolution	304
structure	301
protein	266
database	243
microarray	234
prediction	233
proteomics	215
network	208
genome	193
alignment	190
statistics	189
methods	176
metagenomics	147
algorithm	133
classification	117
clustering	111
biology	110
annotation	109
sequence	108
algorithms	107
analysis	105
phylogeny	105
interaction	100
phylogenetics	100
mirna	99
tool	91
gene	89
ontology	89
computational	88
protein-protein	88
sequence_alignment	82
microrna	81
secondary_structure	81
text-mining	79
biophysics	75
protein_structure	75
ncrna	73
networks	73
sequencing	73
genetics	72
human	68
visualization	66
secondary	64
data	63
modeling	62
assembly	61
epigenetics	61
motif	61
snp	61
bioinformatics_software	60
expression	60
integration	60
method	59
databases	58
yeast	58
search	57
systems	56
tools	56
bacteria	54
workflow	54
function	53
cancer	52
comparative_genomics	52
comparative	51
systems_biology	50
transcription	48
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structure_prediction	47
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hmm	44
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web	44
protein_interactions	42
servers	42
unread	42
2007	41
regulation	41
tfs	41
arabidopsis	40
blast	40
model	40
programming	37
printed	36
r	36
chip	35
histone	35
correlated_mutations	34
folding	33
disease	32
informatics	32
systems-biology	32
book	31
genome_annotation	31
rpt	31

Group: steinmetzlab - with tag bioinformatics [22 articles] Export

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