Group: dbk-lab - with tag new [117 articles] Export Sort

Recent papers posted by members of the dbk-lab group with tag new

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	SLIM: an alternative Web interface for MEDLINE/PubMed searches - a preliminary study. [My Copy] BMC medical informatics and decision making, Vol. 5 (2005) by Michael Muin, Paul Fontelo, Fang Liu, Michael Ackerman posted to new by irenas to the group dbk-lab on 2007-07-18 14:51:14 as along with 5 people lmichan artaban421 A_Hoogendam mgregg kahumbu
	Meta-All: a system for managing metabolic pathway information [My Copy] BMC Bioinformatics, Vol. 7 (23 October 2006), 465. by Stephan Weise, Ivo Grosse, Christian Klukas, et al.Dirk Koschuetzki, Uwe Scholz, Falk Schreiber, Bjoern H. Junker posted to new by irenas to the group dbk-lab on 2007-05-03 13:02:16 as
	Formal ontology for natural language processing and the integration of biomedical databases. [My Copy] Int J Med Inform, Vol. 75, No. 3-4. (r 2006), pp. 224-231. by J. Simon, M. Dos Santos, J. Fielding, B. Smith posted to new by irenas to the group dbk-lab on 2007-01-30 18:08:55 as along with 1 person and 1 group kkaiser IEG
	Generating hypotheses by discovering implicit associations in the literature: a case report of a search for new potential therapeutic uses for thalidomide. [My Copy] J Am Med Inform Assoc, Vol. 10, No. 3. (n 2003), pp. 252-259. by M. Weeber, R. Vos, H. Klein, L. T. De Jong-Van Den Berg, A. R. Aronson, G. Molema posted to new by irenas to the group dbk-lab on 2006-11-22 17:12:13 as along with 4 people and 2 groups mitko yas fisherp JeffreyDemaine T_lab CISTI-Research
	Automatic extraction of gene/protein biological functions from biomedical text [My Copy] Bioinformatics, Vol. 21, No. 7. (01 April 2005), pp. 1227-1236. by Koike Asako, Niwa Yoshiki, Takagi Toshihisa posted to new by irenas to the group dbk-lab on 2006-11-22 16:20:50 as along with 4 people and 1 group bqchinh yas helliontroy gaudan biomedical-nlp
	An architecture for biological information extraction and representation [My Copy] Bioinformatics, Vol. 21, No. 4. (15 February 2005), pp. 430-438. by Aditya Vailaya, Peter Bluvas, Robert Kincaid, Allan Kuchinsky, Michael Creech, Annette Adler posted to new by irenas to the group dbk-lab on 2006-11-22 16:20:24 as along with 7 people lh49 Keywan eweaver kt t11 kemo thomaskelder
	Expert knowledge without the expert: integrated analysis of gene expression and literature to derive active functional contexts. [My Copy] Bioinformatics, Vol. 21 Suppl 2 (1 September 2005) by R. Küffner, K. Fundel, R. Zimmer posted to new by irenas to the group dbk-lab on 2006-11-22 15:52:50 as along with 6 people and 1 group chad_davis yas fisherp incovoma vlachmore TheresaNiederberger T_lab
	Analysis of genomic and proteomic data using advanced literature mining. [My Copy] J Proteome Res, Vol. 2, No. 4. (g 2003), pp. 405-412. by Y. Hu, L. M. Hines, H. Weng, et al.D. Zuo, M. Rivera, A. Richardson, J. LaBaer posted to new by irenas to the group dbk-lab on 2006-11-22 15:52:21 as along with 1 person and 1 group yas T_lab
	Conceptual biology, hypothesis discovery, and text mining: Swanson's legacy [My Copy] Biomedical Digital Libraries, Vol. 3, No. 1. (03 April 2006), 2. by Tanja Bekhuis posted to new by irenas to the group dbk-lab on 2006-11-22 15:51:25 as along with 6 people and 2 groups mitko lmichan guhjy Enro yas JeffreyDemaine T_lab CISTI-Research
	An online literature mining tool for protein phosphorylation. [My Copy] Bioinformatics (27 April 2006) by X Yuan, Z Z Z. Hu, H T T. Wu, et al.M Torii, M Narayanaswamy, K E E. Ravikumar, K Vijay-Shanker, C H H. Wu posted to new by irenas to the group dbk-lab on 2006-11-22 15:50:50 as along with 2 people and 1 group yas neils T_lab
	Combining evidence, biomedical literature and statistical dependence: new insights for functional annotation of gene sets. [My Copy] BMC Bioinformatics, Vol. 7, No. 1. (4 May 2006) by Marc Aubry, Annabelle Monnier, Celine Chicault, et al.Marie de Tayrac, Marie-Dominique D. Galibert, Anita Burgun, Jean Mosser posted to new by irenas to the group dbk-lab on 2006-11-22 15:50:23 as along with 5 people and 3 groups yas dullhunk caporaso kkaiser yggdrasil T_lab biomedical-nlp IEG
	Automatic document classification of biological literature. [My Copy] BMC bioinformatics, Vol. 7, No. 1. (07 August 2006), 370. by David Chen, Hans-Michael M. Müller, Paul W. Sternberg posted to new by irenas to the group dbk-lab on 2006-11-22 15:49:33 as along with 7 people and 3 groups druvus thegoose2 liblab tharris Enro yas ananthrk Bioinformatics C. elegans / WormBase T_lab
	Mining literature for systems biology [My Copy] Brief Bioinform, Vol. 7, No. 4. (1 December 2006), pp. 399-406. by Phoebe M. Roberts posted to new by irenas to the group dbk-lab on 2006-11-22 15:47:56 as along with 4 people and 1 group abhishek_tiwari Scis0000002 yas jacky957 T_lab
	Text mining and its potential applications in systems biology. [My Copy] Trends Biotechnol (11 October 2006) by Sophia Ananiadou, Douglas B B. Kell, Jun-Ichi I. Tsujii posted to new by irenas to the group dbk-lab on 2006-11-06 16:13:10 as along with 18 people and 2 groups babaluma artaban421 eesruiz liblab henk-cul guhjy jfr yas dullhunk fisherp jacky957 daniel_schober dejori pablomendes pmendes TheresaNiederberger alanrw satre ImagCom - Biomedical Text Computing T_lab
	PubFocus: semantic MEDLINE/PubMed citations analytics through integration of controlled biomedical dictionaries and ranking algorithm [My Copy] BMC Bioinformatics, Vol. 7, No. 1. (02 October 2006), 424. by Maksim Plikus, Zina Zhang, Cheng M. Chuong posted to new by irenas to the group dbk-lab on 2006-10-26 12:57:30 as along with 11 people and 1 group carelcad artaban421 lmichan dmolla daforerog ajaymalik Enro yas dullhunk Gaetan adoms T_lab
	Euclidian space and grouping of biological objects. [My Copy] Bioinformatics, Vol. 18, No. 11. (November 2002), pp. 1523-1534. by V. N. Grishin, N. V. Grishin posted to new by irenas to the group dbk-lab on 2006-09-19 13:02:02 as along with 1 person kinestetika
	Combination of text-mining algorithms increases the performance. [My Copy] Bioinformatics (9 June 2006) by Rainer Malik, Lude Franke, Arno Siebes posted to new txtmining by irenas to the group dbk-lab on 2006-08-24 14:09:42 as along with 9 people and 4 groups bqchinh cisevol snuppepuppan guhjy yas fisherp caporaso markymaypo soramame_0518 BergmanLab T_lab biomedical-nlp ARTFL
	Processing and classification of protein mass spectra [My Copy] Mass Spectrometry Reviews, Vol. 25, No. 3. (2006), pp. 409-449. by Melanie Hilario, Alexandros Kalousis, Christian Pellegrini, Markus Müller posted to new by irenas to the group dbk-lab on 2006-07-24 16:05:35 as along with 2 people awg2 teds
	Future Drugs - Expert Review of Proteomics - 2(6):915 - Summary [My Copy] posted to new by irenas to the group dbk-lab on 2006-07-13 14:44:01 as
	BMC Bioinformatics comes of age. [My Copy] BMC Bioinformatics, Vol. 6 (2005) by M. J. Cockerill posted to new by irenas to the group dbk-lab on 2006-07-13 14:42:14 as along with 4 people and 1 group lilith moborg dullhunk sci91078 8_01
	A two-way interface between limited Systems Biology Markup Language and R. [My Copy] BMC Bioinformatics, Vol. 5, No. 1. (7 December 2004) by T. Radivoyevitch posted to new by irenas to the group dbk-lab on 2006-07-13 14:41:46 as along with 1 person and 1 group karthikram Neoscientists
	Ontological visualization of protein-protein interactions. [My Copy] BMC Bioinformatics, Vol. 6 (2005) by H. J. Drabkin, C. Hollenbeck, D. P. Hill, J. A. Blake posted to new by irenas to the group dbk-lab on 2006-07-13 14:25:04 as along with 1 person renatomilani
	Statistical modeling of biomedical corpora: mining the Caenorhabditis Genetic Center Bibliography for genes related to life span. [My Copy] BMC Bioinformatics, Vol. 7, No. 1. (8 May 2006) by D M. Blei, K Franks, M I. Jordan, I S. Mian posted to new by irenas to the group dbk-lab on 2006-05-30 11:52:27 as along with 3 people and 3 groups yas caporaso oannes T_lab biomedical-nlp Regulomics_UCHSC
	Multiplexed absolute quantification in proteomics using artificial QCAT proteins of concatenated signature peptides [My Copy] Nature Methods, Vol. 2, No. 8. (21 July 2005), pp. 587-589. by Robert J. Beynon, Mary K. Doherty, Julie M. Pratt, Simon J. Gaskell posted to mcisb new by irenas to the group dbk-lab on 2006-04-20 12:42:08 as
	Biomedical language processing: what's beyond PubMed? [My Copy] Molecular cell, Vol. 21, No. 5. (3 March 2006), pp. 589-594. by Lawrence Hunter, K. Bretonnel Cohen posted to new by irenas to the group dbk-lab on 2006-04-17 18:41:12 as along with 17 people and 2 groups babaluma billhao Gaetan artaban421 robert85 lmichan gavinhoran ogenex henk-cul farzanehs andytseng yas hpiwowar caporaso jacky957 TheresaNiederberger satre T_lab biomedical-nlp
	K2/Kleisli and GUS: Experiments in integrated access to genomic data sources [My Copy] IBM SYSTEMS JOURNAL, Vol. 40, No. 2. (2001) by S. B. Davidson, J. Crabtree, B. P. Brunk, et al.J. Schug, V. Tannen, G. C. Overton, Stoeckert posted to new by irenas to the group dbk-lab on 2006-04-03 16:41:43 as along with 1 person csardas
	Top-down standards will not serve systems biology. [My Copy] Nature, Vol. 440, No. 7080. (2 March 2006), pp. 24-24. by John Quackenbush, Christian Stoeckert, Catherine Ball, et al.Alvis Brazma, Robert Gentleman, Wolfgang Huber, Rafael Irizarry, Marc Salit, Gavin Sherlock, Paul Spellman, Neil Winegarden posted to new by irenas to the group dbk-lab on 2006-03-28 13:43:50 as along with 4 people neilswainston andytseng wnpx mhucka
	Functional genomics databases on the web [My Copy] Cellular Microbiology, Vol. 7, No. 8. (August 2005), pp. 1053-1059. by Christian J. Stoeckert posted to new by irenas to the group dbk-lab on 2006-03-03 13:43:52 as along with 1 person andytseng
	From XML to RDF: how semantic web technologies will change the design of 'omic' standards [My Copy] Nature Biotechnology, Vol. 23, No. 9. (07 September 2005), pp. 1099-1103. by Xiaoshu Wang, Robert Gorlitsky, Jonas S. Almeida posted to new by irenas to the group dbk-lab on 2006-02-10 12:18:28 as along with 16 people and 2 groups allysonlister egonw eesruiz rvosa druvus badger_master andytseng moborg wnpx dullhunk hpiwowar ianturton mza jmuhlich ibuch dansullivanblk ImagCom - Biomedical Text Computing SorgerLab
	Unsupervised learning of natural languages [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 102, No. 33. (16 August 2005), pp. 11629-11634. by Zach Solan, David Horn, Eytan Ruppin, Shimon Edelman posted to new by irenas to the group dbk-lab on 2006-01-24 16:47:28 as along with 25 people and 9 groups holopoj johnkork malaguena michaelfairley mthomure parmentierf ansobol apaydin jrw garyfeng aufrank marimo grzegorz yas briordan Kevembuangga proportional caporaso paulclinger katja awarlau monster soramame_0518 hukkinen gaber ReadingLab ur-cls MathBio Impending_AI_breakthrough T_lab biomedical-nlp social_navigation ilps ahat
	Grammatical model of the regulation of gene expression. [My Copy] Proc Natl Acad Sci U S A, Vol. 89, No. 20. (15 October 1992), pp. 9405-9409. by J. Collado-Vides posted to new by irenas to the group dbk-lab on 2006-01-24 16:30:22 as along with 3 people andytseng discreteonyxorb maximilianh
	Metabolomics and biochemical profiling in drug discovery and development. [My Copy] Curr Opin Mol Ther, Vol. 4, No. 3. (June 2002), pp. 224-228. by S. M. Watkins, J. B. German posted to metab new omics by irenas to the group dbk-lab on 2006-01-19 14:17:53 as
	Fusion of mass spectrometry-based metabolomics data. [My Copy] Anal Chem, Vol. 77, No. 20. (15 October 2005), pp. 6729-6736. by A. K. Smilde, M. J. van der Werf, S. Bijlsma, B. J. van der Werff-van der Vat, R. H. Jellema posted to metab new omics by irenas to the group dbk-lab on 2006-01-19 14:16:55 as along with 3 people mayercd andytseng rvosa
	Metabolomics shows the way to new discoveries. [My Copy] Genome Biol, Vol. 6, No. 11. (2005) by R. Goodacre posted to metab new omics by irenas to the group dbk-lab on 2006-01-19 14:13:01 as along with 1 person daniel_schober
	Metabolomics reviewed: a new "omics" platform technology for systems biology and implications for natural products research. [My Copy] J Nat Prod, Vol. 68, No. 12. (December 2005), pp. 1813-1820. by S. Rochfort posted to metab new omics by irenas to the group dbk-lab on 2006-01-19 14:11:47 as along with 4 people balicea imouthesmp daniel_schober wilbur
	Metabolomics applications of FT-ICR mass spectrometry. [My Copy] Mass Spectrom Rev, Vol. 24, No. 2. (r 2005), pp. 223-231. by S. C. Brown, G. Kruppa, J. L. Dasseux posted to metab new omics by irenas to the group dbk-lab on 2006-01-19 14:11:02 as
	Metabolomics or metabolite profiles? [My Copy] Trends Biotechnol, Vol. 23, No. 8. (August 2005), pp. 385-386. by S. G. Villas-Bôas, S. Rasmussen, G. A. Lane posted to metab new omics by irenas to the group dbk-lab on 2006-01-19 14:10:22 as along with 2 people daniel_schober westoll
	Metabolomics: opening another window into aging. [My Copy] Sci Aging Knowledge Environ, Vol. 2005, No. 26. (29 June 2005) by B. S. Kristal, Y. I. Shurubor posted to metab new omics by irenas to the group dbk-lab on 2006-01-19 14:09:41 as
	High-throughput data analysis for detecting and identifying differences between samples in GC/MS-based metabolomic analyses. [My Copy] Anal Chem, Vol. 77, No. 17. (1 September 2005), pp. 5635-5642. by P. Jonsson, A. I. Johansson, J. Gullberg, et al.J. Trygg, J. A, B. Grung, S. Marklund, M. Sjöström, H. Antti, T. Moritz posted to metab new omics spectro by irenas to the group dbk-lab on 2006-01-19 14:05:00 as
	Plant metabolomics: large-scale phytochemistry in the functional genomics era. [My Copy] Phytochemistry, Vol. 62, No. 6. (March 2003), pp. 817-836. by L. W. Sumner, P. Mendes, R. A. Dixon posted to metab new omics by irenas to the group dbk-lab on 2006-01-19 14:04:06 as along with 2 people ajaymalik pmendes
	Metabolomics: from pattern recognition to biological interpretation. [My Copy] Drug Discov Today, Vol. 10, No. 22. (15 November 2005), pp. 1551-1558. by W. Weckwerth, K. Morgenthal posted to metab new omics by irenas to the group dbk-lab on 2006-01-19 14:02:40 as along with 2 people flbarroso daniel_schober
	Biomedical Ontologies in Post-Genomic Information Systems [My Copy] posted to new by irenas to the group dbk-lab on 2006-01-19 12:19:04 as
	Learning Algorithms for Keyphrase Extraction [My Copy] Information Retrieval, Vol. 2, No. 4. (2000), pp. 303-336. by Peter D. Turney posted to new term by irenas to the group dbk-lab on 2006-01-18 15:36:43 as along with 2 people zibuyu johnkork
	Domain-Specific Keyphrase Extraction [My Copy] In IJCAI (1999), pp. 668-673. by Eibe Frank, Gordon W. Paynter, Ian H. Witten, Carl Gutwin, Craig G. Nevill-Manning posted to new term by irenas to the group dbk-lab on 2006-01-18 15:33:17 as along with 3 people and 2 groups sgmorrison scofield johnkork automatic_summarization automatic-keyphrase-extraction
	Domain-specific keyphrase extraction [My Copy] In CIKM '05: Proceedings of the 14th ACM international conference on Information and knowledge management (2005), pp. 283-284. by Yi-Fang B. Wu, Quanzhi Li, Razvan S. Bot, Xin Chen posted to new term by irenas to the group dbk-lab on 2006-01-18 15:30:11 as along with 3 people zibuyu Phanix johnkork
	Data standards for 'omic' science. [My Copy] Nat Biotechnol, Vol. 22, No. 5. (May 2004), pp. 613-614. by J. Quackenbush posted to print owg new by irenas to the group dbk-lab on 2006-01-13 11:56:05 as along with 2 people and 1 group katerinakal fgibson GelML
	Growing pains for metabolomics [My Copy] The Scientist, Vol. 19, No. 8., pp. 25-28. by B. Daviss posted to metab new omics by irenas to the group dbk-lab on 2006-01-13 11:55:03 as
	GENOMICS: A Crisis in Postgenomic Nomenclature [My Copy] Science, Vol. 296, No. 5568. (26 April 2002), pp. 671-672. by Stanley Fields, Mark Johnston posted to new by irenas to the group dbk-lab on 2006-01-13 11:50:27 as along with 1 person andytseng
	Will a biological database be different from a biological journal? [My Copy] PLoS Comput Biol, Vol. 1, No. 3. (August 2005), pp. 179-181. by P. Bourne posted to new by irenas to the group dbk-lab on 2006-01-13 11:44:00 as along with 7 people and 1 group vkwn lesikv fgibson dullhunk hpiwowar stajich florianleitner Mycology
	Large-scale integrated databases supporting drug discovery. [My Copy] Curr Opin Drug Discov Devel, Vol. 8, No. 3. (May 2005), pp. 309-315. by A. H. Roter posted to nemam new by irenas to the group dbk-lab on 2006-01-12 15:50:15 as

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