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Group: Microbial-Ecology - library [344 articles]

Recent papers posted by members of the Microbial-Ecology group
  • The Microbial Engines That Drive Earth's Biogeochemical Cycles
    Science, Vol. 320, No. 5879. (23 May 2008), pp. 1034-1039.
    by Paul G Falkowski, Tom Fenchel, Edward F Delong
  • Composition of freshwater small eukaryotes community: unexpected importance of potential parasites.
    Applied and environmental microbiology (21 March 2008)
    by Cécile Lepère, Isabelle Domaizon, Didier Debroas
  • Diversity and evolution of phycobilisomes in marine Synechococcus spp. - a comparative genomics study
    Genome Biology, Vol. 8 (06 December 2007), R259.
    by Christophe Six, Jean-Claude Thomas, Laurence Garczarek, Martin Ostrowski, Alexis Dufresne, Nicolas Blot, David J Scanlan, Frederic Partensky
  • IN-SITU MORPHOLOGY AND OCCURRENCE OF EUCARYOTIC PHOTOTROPHS OF BACTERIAL SIZE IN THE PICOPLANKTON OF ESTUARINE AND OCEANIC WATERS1
    Journal of Phycology, Vol. 18, No. 3. (1982), pp. 318-327.
    by Paul W Johnson, John M Sieburth
    posted to diversity marine microeukaryotes by jdelcampo to the group Microbial-Ecology on 2007-10-02 10:34:37 as *****
  • The importance of culturing bacterioplankton in the 'omics' age
    Nature Reviews Microbiology, Vol. 5, No. 10., pp. 820-826.
    by Stephen Giovannoni, Ulrich Stingl
    posted to culture prokaryotes by jdelcampo to the group Microbial-Ecology on 2007-10-02 10:28:28 as ***** along with 2 people vrich Thaverkamp
  • Community composition of lacustrine small eukaryotes in hyper-eutrophic conditions in relation to top-down and bottom-up factors.
    FEMS Microbiol Ecol, Vol. 61, No. 3. (September 2007), pp. 483-495.
    posted to microeukaryotes freshwater diversity culture-dependent by jdelcampo to the group Microbial-Ecology on 2007-09-04 16:26:15 as *****
  • Crash of a population of the marine heterotrophic flagellate Cafeteria roenbergensis by viral infection
    Environmental Microbiology, Vol. 0, No. 0. (0000), pp. ???-???.
    by Ramon Massana, Del, Christian Dinter, Ruben Sommaruga
    posted to viruses microeukaryotes marine hnf by jdelcampo to the group Microbial-Ecology on 2007-08-17 22:48:19 as *****
  • Plankton Diversity in the Bay of Fundy as Measured by Morphological and Molecular Methods
    Microbial Ecology, Vol. 48, No. 1. (September 2004), pp. 51-65.
    posted to protists phylogeny diversity culture-dependent by jdelcampo to the group Microbial-Ecology on 2007-03-20 17:33:10 as *****
  • The Neolithic revolution of bacterial genomes.
    Trends Microbiol, Vol. 14, No. 5. (May 2006), pp. 200-206.
    posted to metagenomics by beatrizfernandez to the group Microbial-Ecology on 2007-03-16 11:18:18 as *****
  • The Sorcerer II Global Ocean Sampling Expedition: Northwest Atlantic through Eastern Tropical Pacific
    PLoS Biology, Vol. 5, No. 3. (1 March 2007), e77.
    by Douglas B Rusch, Aaron L Halpern, Granger Sutton, Karla B Heidelberg, Shannon Williamson, Shibu Yooseph, Dongying Wu, Jonathan A Eisen, Jeff M Hoffman, Karin Remington, Karen Beeson, Bao Tran, Hamilton Smith, Holly Baden-Tillson, Clare Stewart, Joyce Thorpe, Jason Freeman, Cynthia Andrews-Pfannkoch, Joseph E Venter, Kelvin Li, Saul Kravitz, John F Heidelberg, Terry Utterback, Yu-Hui Rogers, Luisa I Falcón, Valeria Souza, Germán Bonilla-Rosso, Luis E Eguiarte, David M Karl, Shubha Sathyendranath, Trevor Platt, Eldredge Bermingham, Victor Gallardo, Giselle Tamayo-Castillo, Michael R Ferrari, Robert L Strausberg, Kenneth Nealson, Robert Friedman, Marvin Frazier, Craig J Venter
  • CAMERA: A Community Resource for Metagenomics
    PLoS Biology, Vol. 5, No. 3. (1 March 2007), e75.
    by Rekha Seshadri, Saul A Kravitz, Larry Smarr, Paul Gilna, Marvin Frazier
  • Environmental Shotgun Sequencing: Its Potential and Challenges for Studying the Hidden World of Microbes
    PLoS Biology, Vol. 5, No. 3. (1 March 2007), e82.
    by Jonathan A Eisen
  • Sorcerer II: The Search for Microbial Diversity Roils the Waters
    PLoS Biology, Vol. 5, No. 3. (1 March 2007), e74.
    by Henry Nicholls
    posted to metagenomics by jdelcampo to the group Microbial-Ecology on 2007-03-16 09:31:26 as ***** along with 1 person beatrizfernandez
  • Untapped Bounty: Sampling the Seas to Survey Microbial Biodiversity
    PLoS Biology, Vol. 5, No. 3. (1 March 2007), e85.
    by Liza Gross
    posted to metagenomics by jdelcampo to the group Microbial-Ecology on 2007-03-16 09:25:49 as ***** along with 1 person beatrizfernandez
  • Global Ocean Sampling Collection
    PLoS Biology, Vol. 5, No. 3. (1 March 2007), e83.
    by Hemai Parthasarathy, Emma Hill, Catriona Maccallum
    posted to metagenomics by jdelcampo to the group Microbial-Ecology on 2007-03-16 09:25:07 as ***** along with 1 person beatrizfernandez
  • New Strategies for Cultivation and Detection of Previously Uncultured Microbes
    Appl. Environ. Microbiol., Vol. 70, No. 8. (1 August 2004), pp. 4748-4755.
    by Bradley S Stevenson, Stephanie A Eichorst, John T Wertz, Thomas M Schmidt, John A Breznak
    posted to culture prokaryotes by jdelcampo to the group Microbial-Ecology on 2007-02-16 14:33:51 as ***** along with 2 people Olaf_Ilzins rvgomes
  • Cultivating the uncultured
    PNAS, Vol. 99, No. 24. (26 November 2002), pp. 15681-15686.
    by Karsten Zengler, Gerardo Toledo, Michael Rappe, James Elkins, Eric J Mathur, Jay M Short, Martin Keller
    posted to culture prokaryotes by jdelcampo to the group Microbial-Ecology on 2007-02-16 14:29:37 as ***** along with 3 people Olaf_Ilzins mcox rvgomes
  • A Molecular View of Microbial Diversity and the Biosphere
    Science, Vol. 276, No. 5313. (2 May 1997), pp. 734-740.
    by Norman R Pace
    posted to diversity microbial-ecology by jdelcampo to the group Microbial-Ecology on 2007-02-16 14:11:08 as ***** along with 2 people mcox jmeppley
  • MICROBIOLOGY: Exploring Microbial Diversity--A Vast Below
    Science, Vol. 309, No. 5739. (26 August 2005), pp. 1331-1333.
    by TP Curtis, WT Sloan
    posted to diversity microbial-ecology by jdelcampo to the group Microbial-Ecology on 2007-02-16 14:08:17 as ***** along with 2 people mcox rvgomes
  • Environmental Genome Shotgun Sequencing of the Sargasso Sea
    Science, Vol. 304, No. 5667. (02 April 2004), pp. 66-74.
    by Craig C Venter, Karin Remington, John F Heidelberg, Aaron L Halpern, Doug Rusch, Jonathan A Eisen, Dongying Wu, Ian Paulsen, Karen E Nelson, William Nelson, Derrick E Fouts, Samuel Levy, Anthony H Knap, Michael W Lomas, Ken Nealson, Owen White, Jeremy Peterson, Jeff Hoffman, Rachel Parsons, Holly Baden-Tillson, Cynthia Pfannkoch, Yu-Hui Rogers, Hamilton O Smith
  • The new higher level classification of eukaryotes with emphasis on the taxonomy of protists.
    J Eukaryot Microbiol, Vol. 52, No. 5. (t 2005), pp. 399-451.
    by SM Adl, AG Simpson, MA Farmer, RA Andersen, OR Anderson, JR Barta, SS Bowser, G Brugerolle, RA Fensome, S Fredericq, TY James, S Karpov, P Kugrens, J Krug, CE Lane, LA Lewis, J Lodge, DH Lynn, DG Mann, RM McCourt, L Mendoza, O Moestrup, SE Mozley-Standridge, TA Nerad, CA Shearer, AV Smirnov, FW Spiegel, MF Taylor
  • Picobiliphytes: A Marine Picoplanktonic Algal Group with Unknown Affinities to Other Eukaryotes
    Science, Vol. 315, No. 5809. (12 January 2007), pp. 253-255.
    by Fabrice Not, Klaus Valentin, Khadidja Romari, Connie Lovejoy, Ramon Massana, Kerstin Tobe, Daniel Vaulot, Linda K Medlin
    posted to diversity microeukaryotes by jdelcampo to the group Microbial-Ecology on 2007-02-14 15:20:27 as ***** along with 1 person Fabnot
  • Impact of culture-independent studies on the emerging phylogenetic view of bacterial diversity.
    J Bacteriol, Vol. 180, No. 18. (September 1998), pp. 4765-4774.
    by P Hugenholtz, BM Goebel, NR Pace
    posted to culture phylogeny prokaryotes by jdelcampo to the group Microbial-Ecology on 2006-11-25 10:29:13 as ***** along with 1 person jmeppley
  • The 96-well twin-layer system: a novel approach in the cultivation of microalgae.
    Protist, Vol. 156, No. 2. (August 2005), pp. 239-251.
    by EC Nowack, B Podola, M Melkonian
    posted to culture isolation microeukaryotes by jdelcampo to the group Microbial-Ecology on 2006-11-16 13:04:05 as *****
  • Molecular screening of free-living microbial eukaryotes: diversity and distribution using a meta-analysis.
    Curr Opin Microbiol, Vol. 8, No. 3. (June 2005), pp. 240-252.
    by TA Richards, D Bass
  • Marine microbial diversity: can it be determined?
    Trends Microbiol, Vol. 14, No. 6. (June 2006), pp. 257-263.
  • Picoeukaryotic plankton diversity at the Helgoland time series site as assessed by three molecular methods.
    Microb Ecol, Vol. 52, No. 1. (July 2006), pp. 53-71.
  • Protist diversity is different?
    Protist, Vol. 155, No. 1. (March 2004), pp. 15-22.
    by BJ Finlay, GF Esteban, T Fenchel
    posted to diversity microeukaryotes by jdelcampo to the group Microbial-Ecology on 2006-11-09 10:06:43 as ***** along with 1 person rabu
  • The diversity of microbes: resurgence of the phenotype.
    Philos Trans R Soc Lond B Biol Sci, Vol. 361, No. 1475. (29 November 2006), pp. 1965-1973.
    by T Fenchel, BJ Finlay
    posted to diversity morphoespecies by jdelcampo to the group Microbial-Ecology on 2006-11-08 17:10:35 as *****
  • Dishing a modern myth about microbes
    Nature, Vol. 444, No. 7115. (01 November 2006), pp. 31-31.
    by Tom Fenchel, Genoveva F Esteban, Bland J Finlay
    posted to microbial-ecology by jdelcampo to the group Microbial-Ecology on 2006-11-08 17:09:39 as *****
  • Unexpected diversity of small eukaryotes in deep-sea Antarctic plankton.
    Nature, Vol. 409, No. 6820. (1 February 2001), pp. 603-607.
    posted to hnf by jdelcampo to the group Microbial-Ecology on 2006-11-06 15:23:51 as *****
  • Study of Genetic Diversity of Eukaryotic Picoplankton in Different Oceanic Regions by Small-Subunit rRNA Gene Cloning and Sequencing
    Appl. Environ. Microbiol., Vol. 67, No. 7. (1 July 2001), pp. 2932-2941.
    by Beatriz Diez, Carlos Pedrós-Alió, Ramon Massana
    posted to hnf by jdelcampo to the group Microbial-Ecology on 2006-11-06 15:01:53 as *****
  • Microbial Biogeography: From Taxonomy to Traits
    Science, Vol. 320, No. 5879. (23 May 2008), pp. 1039-1043.
    by Jessica L Green, Brendan J Bohannan, Rachel J Whitaker
  • Microbial Ecology of Ocean Biogeochemistry: A Community Perspective
    Science, Vol. 320, No. 5879. (23 May 2008), pp. 1043-1045.
    by Suzanne L Strom
  • Chromatophore genome sequence of Paulinella sheds light on acquisition of photosynthesis by eukaryotes.
    Current biology : CB, Vol. 18, No. 6. (25 March 2008), pp. 410-418.
  • Light Variability Illuminates Niche-Partitioning among Marine Picocyanobacteria.
    PLoS ONE, Vol. 2, No. 12. (2007)
    by C Six, ZV Finkel, AJ Irwin, DA Campbell
  • Molecular Phylogeny of Labyrinthulids and Thraustochytrids Based On the Sequencing of 18s Ribosomal Rna Gene
    The Journal of Eukaryotic Microbiology, Vol. 46, No. 6. (1999), pp. 637-647.
    by Daiske Honda, Toshihiro Yokochi, Toro Nakahara, Seshagiri Raghukumar, Akira Nakagiri, Karsten Schaumann, Takanori Higashihara
    posted to labyrinthulids phylogeny thaustochytrids by jdelcampo to the group Microbial-Ecology on 2007-10-02 10:37:49 as ****
  • Fluorescent oligonucleotide rDNA probes that specifically bind to a common nanoflagellate, Paraphysomonas vestita
    Microbiology, Vol. 143, No. 5. (1 May 1997), pp. 1717-1727.
    by J Rice, Cd O'Connor, Ma Sleigh, Ph Burkill, Ig Giles, Mv Zubkov
    posted to chrysophyceae fish by jdelcampo to the group Microbial-Ecology on 2007-10-02 10:31:23 as ****
  • Autochthonous eukaryotic diversity in hydrothermal sediment and experimental microcolonizers at the Mid-Atlantic Ridge.
    Proc Natl Acad Sci U S A, Vol. 100, No. 2. (21 January 2003), pp. 697-702.
    posted to protists phylogeny marine diversity by jdelcampo to the group Microbial-Ecology on 2007-04-17 15:22:15 as ****
  • Microbiology: eukaryotic diversity in Spain's River of Fire.
    Nature, Vol. 417, No. 6885. (9 May 2002)
    posted to protists phylogeny freshwater diversity by jdelcampo to the group Microbial-Ecology on 2007-04-17 15:18:40 as ****
  • Molecular phylogeny of Cercomonadidae and kinetid patterns of Cercomonas and Eocercomonas gen. nov. (Cercomonadida, Cercozoa).
    Protist, Vol. 157, No. 2. (June 2006), pp. 125-158.
    posted to taxonomy protists phylogeny cercozoa by jdelcampo to the group Microbial-Ecology on 2007-04-02 11:59:11 as ****
  • Metagenomics. Massive microbial sequence project proposed.
    Science, Vol. 315, No. 5820. (30 March 2007)
    by E Pennisi
    posted to metagenomics by jdelcampo to the group Microbial-Ecology on 2007-04-02 11:49:49 as ****
  • Species diversity of heterotrophic flagellates in White Sea littoral sites
    European Journal of Protistology, Vol. 42, No. 3. (September 2006), pp. 191-200.
    by Denis V Tikhonenkov, Yuri A Mazei, Alexander P Mylnikov
    posted to culture-dependent diversity by jdelcampo to the group Microbial-Ecology on 2007-03-20 17:29:39 as ****
  • Environmental genomics, the big picture?
    FEMS Microbiol Lett, Vol. 231, No. 2. (16 February 2004), pp. 153-158.
    posted to metagenomics by beatrizfernandez to the group Microbial-Ecology on 2007-03-16 12:24:32 as **** along with 1 person eweaver
  • METAGENOMICS: Ocean Study Yields a Tidal Wave of Microbial DNA
    Science, Vol. 315, No. 5818. (16 March 2007), pp. 1486-1487.
    by John Bohannon
    posted to metagenomics by jdelcampo to the group Microbial-Ecology on 2007-03-16 09:49:48 as **** along with 1 person rvgomes
  • Mapping of picoeucaryotes in marine ecosystems with quantitative PCR of the 18S rRNA gene
    FEMS Microbiology Ecology, Vol. 52 (2005), pp. 79-92.
    by Fei Zhu, Ramon Massana, Fabrice Not, Dominique Marie, Daniel Vaulot
  • Viruses in the sea
    Nature, Vol. 437, No. 7057. (14 September 2005), pp. 356-361.
    by Curtis A Suttle
    posted to marine viruses by jdelcampo to the group Microbial-Ecology on 2007-02-16 15:19:29 as **** along with 2 people dayjm zukeboy
  • Should there be a separate code of nomenclature for the protists?
    Biosystems, Vol. 28, No. 1-3. (1992), pp. 1-14.
    by JO Corliss
    posted to microeukaryotes taxonomy by jdelcampo to the group Microbial-Ecology on 2007-02-16 14:43:22 as ****
  • Eukaryotic diversity associated with carbonates and fluidseawater interface in Lost City hydrothermal field
    Environmental Microbiology, Vol. 9, No. 2. (February 2007), pp. 546-554.
    by Purificacion López-García, Alexander Vereshchaka, David Moreira
    posted to diversity marine microeukaryotes by jdelcampo to the group Microbial-Ecology on 2007-02-14 15:27:55 as ****
  • Further observations on flagellates within sea ice in northern Bothnian Bay, the Baltic Sea
    Polar Biology, Vol. V19, No. 5. (16 April 1998), pp. 323-329.
    by Johanna Ikävalko
    posted to culture-dependent hnf marine microeukaryotes by jdelcampo to the group Microbial-Ecology on 2007-02-14 14:05:08 as ****
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