Group: Koch_Lab - with tag single-molecule [37 articles] Export

Recent papers posted by members of the Koch_Lab group with tag single-molecule

	Single molecule transcription elongation [My Copy] Methods, Vol. 48, No. 4. (06 August 2009), pp. 323-332. by Eric A. Galburt, Stephan W. Grill, Carlos Bustamante posted to transcription single-molecule polii methods by skoch3 to the group Koch_Lab on 2009-08-22 22:50:28 as
	Direct observation of the binding state of the kinesin head to the microtubule [My Copy] Nature, Vol. 461, No. 7260. (3 September 2009), pp. 125-128. by Nicholas R. Guydosh, Steven M. Block posted to stepping-mechanism single-molecule model kinesin-1 kinesin dna-handle by skoch3 to the group Koch_Lab on 2009-08-21 20:32:40 as along with 2 people and 1 group samjlord alexknight moernerlab
	Nucleosomal fluctuations govern the transcription dynamics of RNA polymerase II. [My Copy] Science (New York, N.Y.), Vol. 325, No. 5940. (31 July 2009), pp. 626-628. by Courtney Hodges, Lacramioara Bintu, Lucyna Lubkowska, Mikhail Kashlev, Carlos Bustamante posted to transcription single-molecule in-vitro chromatin by skoch3 to the group Koch_Lab on 2009-08-18 22:44:21 as along with 8 people sebastien_vigneau emptyhb jbhiatt pkner absterga leliavski TRHvidsten RamuAnandakrishnan
	A general method for manipulating DNA sequences from any organism with optical tweezers. [My Copy] Nucleic Acids Res, Vol. 34, No. 2. (2006) by Derek N N. Fuller, Gregory J J. Gemmen, John Peter P. Rickgauer, et al.Aurelie Dupont, Rachel Millin, Pierre Recouvreux, Douglas E E. Smith posted to genomic-dna methods ot single-molecule tethering by skoch3 to the group Koch_Lab on 2009-05-07 05:53:49 as along with 1 person ruudvanleeuwen
	Conversion of Unc104/KIF1A Kinesin into a Processive Motor After Dimerization [My Copy] Science, Vol. 297, No. 5590. (27 September 2002), pp. 2263-2267. by Michio Tomishige, Dieter R. Klopfenstein, Ronald D. Vale posted to dtra kif1a kinesin liposome motility processivity single-molecule unc104 by skoch3 to the group Koch_Lab on 2009-04-27 05:47:28 as along with 3 people and 1 group thegoose2 tharris qwermish C. elegans / WormBase
	Force spectroscopy of a single artificial biomolecule bond: The Kramers' high-barrier limit holds close to the critical force [My Copy] The Journal of Chemical Physics, Vol. 130, No. 5. (2009), 051103. by J. Husson, M. Dogterom, F. Pincet posted to dfs force kramers ot single-molecule spectroscopy by skoch3 to the group Koch_Lab on 2009-04-05 06:44:34 as
	Versatile Horizontal Force Probe for Mechanical Tests on Pipette-Held Cells, Particles, and Membrane Capsules [My Copy] Biophysical Journal, Vol. 96, No. 3. (2009), pp. 1218-1231. by Chawin Ounkomol, Hongtao Xie, Paul A. Dayton, Volkmar Heinrich posted to force instrumentation microfluidics single-molecule smm by skoch3 to the group Koch_Lab on 2009-02-05 08:24:11 as
	DNA primase acts as a molecular brake in DNA replication [My Copy] Nature, Vol. 439, No. 7076., pp. 621-624. by Jong-Bong Lee, Richard K. Hite, Samir M. Hamdan, Sunney X. Xie, Charles C. Richardson, Antoine M. van Oijen posted to dnaprimase single-molecule by skoch3 to the group Koch_Lab on 2009-01-25 03:53:26 as
	An algorithm for assembly of ordered restriction maps from single DNA molecules [My Copy] Proceedings of the National Academy of Sciences, Vol. 103, No. 43. (24 October 2006), pp. 15770-15775. by Anton Valouev, David C. Schwartz, Shiguo Zhou, Michael S. Waterman posted to mapping restriction sdm single-molecule by skoch3 to the group Koch_Lab on 2008-12-11 23:21:16 as
	Optical mapping discerns genome wide DNA methylation profiles [My Copy] BMC Molecular Biology, Vol. 9 (30 July 2008), 68. by Gene E. Ananiev, Steve Goldstein, Rod Runnheim, et al.Dan K. Forrest, Shiguo Zhou, Konstantinos Potamousis, Chris P. Churas, Veit Bergendahl, James A. Thomson, David C. Schwartz posted to mapping optical sdm single-molecule by skoch3 to the group Koch_Lab on 2008-10-15 06:37:46 as along with 1 person Waderoad
	A mechanical unfolding intermediate in an actin-crosslinking protein. [My Copy] Nature structural & molecular biology, Vol. 11, No. 1. (January 2004), pp. 81-85. by Ingo Schwaiger, Angelika Kardinal, Michael Schleicher, Angelika A. Noegel, Matthias Rief posted to polyglycine single-molecule by skoch3 to the group Koch_Lab on 2008-09-22 08:40:56 as along with 2 people choonpeng ruudvanleeuwen
	Single Molecule Force Spectroscopy on Polysaccharides by Atomic Force Microscopy [My Copy] Science, Vol. 275, No. 5304. (28 February 1997), pp. 1295-1297. by Matthias Rief, Filipp Oesterhelt, Berthold Heymann, Hermann E. Gaub posted to biophysics polysaccharide single-molecule by skoch3 to the group Koch_Lab on 2008-09-22 08:16:24 as
	Polysaccharide elasticity governed by chair-boat transitions of the glucopyranose ring. [My Copy] Nature, Vol. 396, No. 6712. (17 December 1998), pp. 661-664. by P. E. Marszalek, A. F. Oberhauser, Y. P. Pang, J. M. Fernandez posted to biophysics polysaccharide single-molecule by skoch3 to the group Koch_Lab on 2008-09-22 08:13:26 as
	Chair-boat transitions in single polysaccharide molecules observed with force-ramp AFM [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 99, No. 7. (2 April 2002), pp. 4278-4283. by Piotr E. Marszalek, Hongbin Li, Andres F. Oberhauser, Julio M. Fernandez posted to biophysics polysaccharide single-molecule by skoch3 to the group Koch_Lab on 2008-09-22 08:05:35 as along with 1 person pansapiens
	DNA overwinds when stretched [My Copy] Nature, Vol. 442, No. 7104. (12 July 2006), pp. 836-839. by Jeff Gore, Zev Bryant, Marcelo Nã¶llmann, Mai U. Le, Nicholas R. Cozzarelli, Carlos Bustamante posted to dna magnetic single-molecule by skoch3 to the group Koch_Lab on 2008-07-07 06:49:38 as
	Active PHO5 chromatin encompasses variable numbers of nucleosomes at individual promoters [My Copy] Nature Structural & Molecular Biology, Vol. 13, No. 3. (19 February 2006), pp. 256-263. by Walter J. Jessen, Scott A. Hoose, Jessica A. Kilgore, Michael P. Kladde posted to chromatin pho5 remodeling single-molecule by skoch3 to the group Koch_Lab on 2008-06-19 18:10:02 as along with 1 person ramalldf
	Single-Molecule Studies Reveal Dynamics of DNA Unwinding by the Ring-Shaped T7 Helicase [My Copy] Cell, Vol. 129, No. 7. (29 June 2007), pp. 1299-1309. by Daniel S. Johnson, Lu Bai, Benjamin Y. Smith, Smita S. Patel, Michelle D. Wang posted to biophysics dna helicase single-molecule unzipping by skoch3 to the group Koch_Lab on 2008-06-14 23:31:19 as along with 1 person gabe_rosser
	A general method for manipulating DNA sequences from any organism with optical tweezers [My Copy] Nucleic Acids Research, Vol. 34, No. 2. (2006), pp. e15-e15. by Derek N. Fuller, Gregory J. Gemmen, John P. Rickgauer, et al.Aurelie Dupont, Rachel Millin, Pierre Recouvreux, Douglas E. Smith posted to dna optical pcr single-molecule tethering tweezers by skoch3 to the group Koch_Lab on 2008-05-20 00:10:11 as
	Histone Octamer Instability under Single Molecule Experiment Conditions [My Copy] J. Biol. Chem., Vol. 280, No. 20. (20 May 2005), pp. 19958-19965. by Cyril Claudet, Dimitar Angelov, Philippe Bouvet, Stefan Dimitrov, Jan Bednar posted to biophysics chromatin native single-molecule by skoch3 to the group Koch_Lab on 2008-05-15 10:10:01 as
	On-site manipulation of single whole-genome DNA molecules using optical tweezers [My Copy] Applied Physics Letters, Vol. 85, No. 21. (2004), pp. 5090-5092. by Hidehiro Oana, Koji Kubo, Kenichi Yoshikawa, Haruyuki Atomi, Tadayuki Imanaka posted to chromatin optical single-molecule tweezers by skoch3 to the group Koch_Lab on 2008-05-15 05:22:37 as along with 1 person hirokiS
	Pulling a single chromatin fiber reveals the forces that maintain its higher-order structure. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 97, No. 1. (4 January 2000), pp. 127-132. by Y. Cui, C. Bustamante posted to chromatin single-molecule by skoch3 to the group Koch_Lab on 2008-05-15 00:06:33 as
	Overstretching B-DNA: The Elastic Response of Individual Double-Stranded and Single-Stranded DNA Molecules [My Copy] Science, Vol. 271, No. 5250. (9 February 1996), pp. 795-799. by Steven B. Smith, Yujia Cui, Carlos Bustamante posted to chain dna fjc freely-jointed overstretching single-molecule wlc worm-like by skoch3 to the group Koch_Lab on 2008-05-07 07:57:43 as along with 1 person phisics
	Chromatin remodeling: insights and intrigue from single-molecule studies [My Copy] Nature Structural & Molecular Biology, Vol. 14, No. 11. (05 November 2007), pp. 989-996. by Bradley R. Cairns posted to chromatin remodeling review single-molecule by skoch3 to the group Koch_Lab on 2008-04-30 06:21:30 as along with 3 people and 1 group Petersarkies zhlei cwbrown EisenLab
	Single-molecule experiments in vitro and in silico. [My Copy] Science, Vol. 316, No. 5828. (25 May 2007), pp. 1144-1148. by M. Sotomayor, K. Schulten posted to dynamic dynamics force in-silico molecular single-molecule smd spectroscopy by skoch3 to the group Koch_Lab on 2008-03-31 16:57:09 as along with 4 people okapi devinli choonpeng hsekiguc
	PROBING THE RELATION BETWEEN FORCE—LIFETIME—AND CHEMISTRY IN SINGLE MOLECULAR BONDS [My Copy] Annual Review of Biophysics and Biomolecular Structure, Vol. 30, No. 1. (2001), pp. 105-128. by Evan Evans posted to classic dynamic force single-molecule spectroscopy by skoch3 to the group Koch_Lab on 2008-03-29 21:11:34 as along with 5 people TheoBioPhys devinli skv kallberg hsekiguc
	Visualizing single DNA-bound proteins using DNA as a scanning probe [My Copy] Nature Methods, Vol. 4, No. 12. (11 November 2007), pp. 1031-1036. by Maarten C. Noom, Bram van den Broek, Joost van Mameren, Gijs J. L. Wuite posted to biophysics dna dynamic force optical protein single-molecule spectroscopy tweezers by skoch3 to the group Koch_Lab on 2007-12-26 22:27:17 as
	Stretching of Homopolymeric RNA Reveals Single-Stranded Helices and Base-Stacking [My Copy] Physical Review Letters, Vol. 98, No. 15. (2007) by Yeonee Seol, Gary M. Skinner, Koen Visscher, Arnaud Buhot, Avraham Halperin posted to spectroscopy single-molecule rna force biophysics afm by skoch3 to the group Koch_Lab on 2007-06-19 18:45:56 as along with 1 person awallin
	Analysis of Kinetics in Noisy Systems: Application to Single Molecule Tethered Particle Motion [My Copy] Biophys. J., Vol. 93, No. 1. (1 July 2007), pp. 21-36. by F. Vanzi, L. Sacconi, F. S. Pavone posted to theory tethered single-molecule particle motion biophysics by skoch3 to the group Koch_Lab on 2007-06-11 05:31:47 as along with 1 person ssfeldman
	Chromatin Fibers, One-at-a-time [My Copy] Journal of Molecular Biology, Vol. 331, No. 1. (1 August 2003), pp. 1-19. by Jordanka Zlatanova, Sanford H. Leuba posted to techniques single-molecule review chromatin by skoch3 to the group Koch_Lab on 2007-04-25 09:47:24 as
	Forced Unfolding of Coiled-Coils in Fibrinogen by Single-Molecule AFM. [My Copy] Biophys J, Vol. 92, No. 5. (1 March 2007) by A. E. Brown, R. I. Litvinov, D. E. Discher, J. W. Weisel posted to spectroscopy single-molecule force fibrinogen dynamic afm by skoch3 to the group Koch_Lab on 2007-04-24 06:40:35 as
	Pulling geometry-induced errors in single molecule force spectroscopy measurements. [My Copy] Biophys J, Vol. 92, No. 9. (1 May 2007) by C. Ke, Y. Jiang, M. Rivera, R. L. Clark, P. E. Marszalek posted to spectroscopy single-molecule force dna biophysics by skoch3 to the group Koch_Lab on 2007-04-11 21:47:53 as
	DNA looping kinetics analyzed using diffusive hidden markov model. [My Copy] Biophys J, Vol. 92, No. 8. (15 April 2007) by J. F. Beausang, C. Zurla, C. Manzo, D. Dunlap, L. Finzi, P. C. Nelson posted to tethered single-molecule particle motion microspheres markov looping hidden fluctuation dna brownian biophysics beads by skoch3 to the group Koch_Lab on 2007-03-29 21:08:22 as
	Single Molecule Energetics of F1-ATPase Motor [My Copy] Biophys. J., Vol. 92, No. 5. (1 March 2007), pp. 1806-1812. by Eiro Muneyuki, Takahiro Watanabe-Nakayama, Tetsuya Suzuki, Masasuke Yoshida, Takayuki Nishizaka, Hiroyuki Noji posted to atpase single-molecule by skoch3 to the group Koch_Lab on 2007-02-20 06:29:34 as
	Multi-Nanopore Force Spectroscopy for DNA Analysis [My Copy] Biophys. J., Vol. 92, No. 5. (1 March 2007), pp. 1632-1637. by Carolina Tropini, Andre Marziali posted to biophysics dna force nanopore sensor single-molecule spectroscopy by skoch3 to the group Koch_Lab on 2007-02-20 05:46:22 as
	A micromachined DNA manipulation platform for the stretching and rotation of a single DNA molecule The preliminary results of the current paper were presented at the IEEE 17th International MEMS Conference (IEEE MEMS 2004), Maastricht, Netherlands, 25–29 Jan. 2004. [My Copy] Journal of Micromechanics and Microengineering, Vol. 15, No. 1. (2005), pp. 109-117. by Chi H. Chiou, Gwo B. Lee posted to beads biomems biophysics dna force magnetic mems microspheres single-molecule by skoch3 to the group Koch_Lab on 2007-02-14 06:59:54 as
	Dynamic force spectroscopy of protein-DNA interactions by unzipping DNA. [My Copy] Phys Rev Lett, Vol. 91, No. 2. (11 July 2003) by S. J. Koch, M. D. Wang posted to unzipping ufapa spectroscopy single-molecule protein force dynamic dna dfs by skoch3 to the group Koch_Lab on 2007-02-03 09:00:41 as along with 1 person TheLarry
	Probing protein-DNA interactions by unzipping a single DNA double helix. [My Copy] Biophys J, Vol. 83, No. 2. (August 2002), pp. 1098-1105. by S. J. Koch, A. Shundrovsky, B. C. Jantzen, M. D. Wang posted to unzipping ufapa single-molecule protein mapping genomics dna by skoch3 to the group Koch_Lab on 2007-02-03 08:58:59 as

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biophysics	41
spectroscopy	37
dna	29
fluorescence	27
force	27
afm	23
chromatin	16
optical	16
protein-unfolding	13
review	13
tweezers	13
protein	12
dynamic	11
microscopy	11
detection	10
kinesin	9
analysis	8
imaging	8
sequencing	8
theory	8
transcription	8
molecular	7
myosin	7
rna	7
magnetic	6
mapping	6
polysaccharide	6
rnap	6
techniques	6
unzipping	6
beads	5
gfp	5
helicase	5
microspheres	5
molecular-motors	5
processivity	5
sdm	5
simulation	5
dfs	4
dyn-het	4
fret	4
gene-expression	4
glass	4
methods	4
microfluidics	4
motion	4
nsf08	4
optics	4
ot	4
overview	4
particle	4
proteins	4
redox	4
remodeling	4
rotation	4
single	4
tethered	4
tethering	4
ufapa	4
atpase	3
correlation	3
dna-polymerase	3
dynamics	3
fluctuation	3
genome	3
jacs	3
landscape	3
model	3
myosin-vi	3
orientation	3
pausing	3
pcr	3
polymerase	3
smd	3
statistics	3
two-photon	3
unfolding	3
brownian	2
dnaprimase	2
dtra	2
fibrinogen	2
fjc	2
fluorophore	2
in-silico	2
interaction	2
looping	2
membrane	2
microarray	2
mle	2
molecule	2
optical-tweezers	2
ph	2
polii	2
polyglycine	2
portable	2
restriction	2
stepping-mechanism	2
t7	2
technology	2
unc104	2

Group: Koch_Lab - with tag single-molecule [37 articles] Export

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