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Group: baker-group - library [5978 articles]

Recent papers posted by members of the baker-group group
  • Targeted Quantum Dot Conjugates for siRNA Delivery.
    Bioconjug Chem (14 July 2007)
    by Austin M Derfus, Alice A Chen, Dal-Hee H Min, Erkki Ruoslahti, Sangeeta N Bhatia
    posted to nucleic_acids nanotech drug_design ccne by sobolevnrm to the group baker-group on 2008-05-15 11:51:36 as ** along with 2 people jyuh ml115
  • Nanoparticle Self-Assembly Gated by Logical Proteolytic Triggers
    J. Am. Chem. Soc., Vol. 129, No. 19. (16 May 2007), pp. 6064-6065.
    by G Vonmaltzahn, TJ Harris, JH Park, DH Min, AJ Schmidt, MJ Sailor, SN Bhatia
    posted to nanotech ccne by sobolevnrm to the group baker-group on 2008-05-15 11:47:27 as read along with 1 person ml115
  • Proteolytic Actuation of Nanoparticle Self-Assembly
    Angewandte Chemie International Edition, Vol. 45, No. 19. (2006), pp. 3161-3165.
    by Todd J Harris, Geoffrey von Maltzahn, Austin M Derfus, Erkki Ruoslahti, Sangeeta N Bhatia
    posted to nanotech ccne by sobolevnrm to the group baker-group on 2008-05-15 11:47:00 as read along with 1 person ml115
  • Quantum dots to monitor RNAi delivery and improve gene silencing
    Nucleic Acids Research, Vol. 33, No. 22. (2005), pp. e190-e190.
    by Alice A Chen, Austin M Derfus, Salman R Khetani, Sangeeta N Bhatia
    posted to nucleic_acids imaging drug_design ccne by sobolevnrm to the group baker-group on 2008-05-15 11:46:38 as read along with 1 person ml115
  • Analysis of the residue-residue coevolution network and the functionally important residues in proteins
    Proteins (in press)
    by BC Lee, K Park, D Kim
    posted to correlated_mutations bioinformatics by sobolevnrm to the group baker-group on 2008-05-15 11:44:28 as read
  • Coarse-Grained MD Simulations of Membrane Protein-Bilayer Self-Assembly
    Structure, Vol. 16, No. 4. (8 April 2008), pp. 621-630.
    by Kathryn A Scott, Peter J Bond, Anthony Ivetac, Alan P Chetwynd, Syma Khalid, Mark S Sansom
    posted to multiscale ion_channels biomembranes by sobolevnrm to the group baker-group on 2008-05-14 12:02:45 as read along with 1 person choonpeng
  • Analytical Approximation for the Generalized Laplace Equation with Step Function Coefficient
    SIAM Journal on Applied Mathematics, Vol. 68, No. 5. (2008), pp. 1268-1281.
    by RF Sviercoski, CL Winter, AW Warrick
    posted to mathematics electrostatics by sobolevnrm to the group baker-group on 2008-05-14 12:00:34 as read
  • The Implementation of Slab Geometry for Membrane-Channel Molecular Dynamics Simulations
    Biophys. J., Vol. 85, No. 1. (1 July 2003), pp. 97-107.
    by David Bostick, Max L Berkowitz
    posted to molecular_dynamics electrostatics biomembranes by sobolevnrm to the group baker-group on 2008-05-13 11:45:02 as read along with 2 people paulschlesinger softsimu
  • A SNO Storm in Skeletal Muscle
    Cell, Vol. 133, No. 1. (4 April 2008), pp. 33-35.
    by Jonathan S Stamler, Qi-An Sun, Douglas T Hess
    posted to nitric_oxide by sobolevnrm to the group baker-group on 2008-05-13 11:39:23 as read
  • Quasi Monte Carlo-based isotropic distribution of gradient directions for improved reconstruction quality of 3D EPR imaging
    Journal of Magnetic Resonance, Vol. 184, No. 2. (February 2007), pp. 236-245.
    by Rizwan Ahmad, Yuanmu Deng, Deepti S Vikram, Bradley Clymer, Parthasarathy Srinivasan, Jay L Zweier, Periannan Kuppusamy
    posted to visualization mathematics imagining by sobolevnrm to the group baker-group on 2008-05-12 17:59:05 as read
  • Rapid approximation to molecular surface area via the use of Boolean logic and look-up tables
    Journal of Computational Chemistry, Vol. 14, No. 3. (1993), pp. 349-352.
    by SM Le Grand, Jr Merz
    posted to solvation molecular_simulation mathematics electrostatics by sobolevnrm to the group baker-group on 2008-05-12 17:54:03 as read
  • Distribution of Amino Acids in a Lipid Bilayer from Computer Simulations
    Biophys. J., Vol. 94, No. 9. (1 May 2008), pp. 3393-3404.
    by Justin L Maccallum, Drew WF Bennett, Peter D Tieleman
    posted to solvation biomembranes by sobolevnrm to the group baker-group on 2008-05-12 12:18:19 as read along with 1 person agrossfield
  • Association of Aminoglycosidic Antibiotics with the Ribosomal A-Site Studied with Brownian Dynamics
    J. Chem. Theory Comput., Vol. 4, No. 4. (8 April 2008), pp. 549-559.
    by Maciej Długosz, Jan M Antosiewicz, Joanna Trylska
    posted to nucleic_acids electrostatics diffusion by sobolevnrm to the group baker-group on 2008-05-12 12:08:14 as read
  • Detecting evolutionary relationships across existing fold space, using sequence order-independent profile-profile alignments
    Proceedings of the National Academy of Sciences, Vol. 105, No. 14. (8 April 2008), pp. 5441-5446.
    by Lei Xie, Philip E Bourne
    posted to structure bioinformatics by sobolevnrm to the group baker-group on 2008-05-12 12:07:16 as read along with 1 person zwang
  • Normal mode partitioning of Langevin dynamics for biomolecules
    The Journal of Chemical Physics, Vol. 128, No. 14. (2008)
    by Christopher R Sweet, Paula Petrone, Vijay S Pande, Jesús A Izaguirre
    posted to quasiharmonic-models_elastic-network_gnm_nma_pca_etc multiscale molecular_dynamics by sobolevnrm to the group baker-group on 2008-05-12 11:53:54 as read along with 1 person paulschlesinger
  • MolAxis: Efficient and accurate identification of channels in macromolecules
    Proteins (in press)
    by E Yaffe, D Fishelovitch, HJ Wolfson, D Halperin, R Nussinov
    posted to structure molecular_simulation by sobolevnrm to the group baker-group on 2008-05-09 11:24:52 as read
  • If you build it... How to create a great laboratory Web site.
    The Scientist, Vol. 22, No. 3. (2008), pp. 81-81.
    by J Scheff
    posted to misc by sobolevnrm to the group baker-group on 2008-05-09 11:21:17 as **
  • Optimized Parameters for Continuum Solvation Calculations with Carbohydrates
    J. Phys. Chem. B, Vol. 112, No. 16. (24 April 2008), pp. 5238-5249.
    by DF Green
    posted to solvation parameterization electrostatics by sobolevnrm to the group baker-group on 2008-05-09 11:10:04 as read
  • Is the Ewald summation still necessary? Pairwise alternatives to the accepted standard for long-range electrostatics
    The Journal of Chemical Physics, Vol. 124, No. 23. (2006)
    by Christopher J Fennell, Daniel J Gezelter
    posted to molecular_simulation molecular_dynamics electrostatics by sobolevnrm to the group baker-group on 2008-05-09 11:02:47 as read along with 3 people mikaellund OndrejMarsalek michaelbussmann
  • Efficient sampling of ion motions in molecular dynamics simulations on DNA: Variant Hamiltonian replica exchange method
    Chemical Physics Letters, Vol. 454, No. 4-6. (20 March 2008), pp. 391-395.
    by Donghong Min, Hongzhi Li, Guohui Li, Bernd A Berg, Marcia O Fenley, Wei Yang
    posted to statistical_mechanics nucleic_acids molecular_simulation electrostatics by sobolevnrm to the group baker-group on 2008-05-08 11:41:20 as read
  • Imaging in the era of molecular oncology
    Nature, Vol. 452, No. 7187. (3 April 2008), pp. 580-589.
    by Ralph Weissleder, Mikael J Pittet
    posted to review nanotech imaging drug_design cancer by sobolevnrm to the group baker-group on 2008-05-08 11:35:19 as read along with 4 people suizan jyuh ibuch isami
  • Minute dosages of alphanubeta3-targeted fumagillin nanoparticles impair Vx-2 tumor angiogenesis and development in rabbits
    FASEB J. (24 March 2008), fj.07-103929.
    by Patrick M Winter, Anne H Schmieder, Shelton D Caruthers, Jeffery L Keene, Huiying Zhang, Samuel A Wickline, Gregory M Lanza
    posted to nanotech emulsions drug_design ccne cancer by sobolevnrm to the group baker-group on 2008-05-08 11:19:09 as read along with 2 people and 1 group rolayo ml115 Nanotechnology and Functional, Smart Materials
  • Enhanced delivery of antisense oligonucleotides with fluorophore-conjugated PAMAM dendrimers
    Nucl. Acids Res., Vol. 28, No. 21. (1 November 2000), pp. 4225-4231.
    by Hoon Yoo, RL Juliano
    posted to nucleic_acids nanotech imaging ccne by sobolevnrm to the group baker-group on 2008-05-08 11:18:40 as read along with 1 person ml115
  • Intracellular delivery of an anionic antisense oligonucleotide via receptor-mediated endocytosis
    Nucl. Acids Res. (26 March 2008), gkn115.
    by Md R Alam, Vidula Dixit, Hyunmin Kang, Zi-Bo Li, Xiaoyaun Chen, Joann Trejo, Michael Fisher, Rudy L Juliano
    posted to nucleic_acids nanotech ccne by sobolevnrm to the group baker-group on 2008-05-08 11:18:10 as read along with 1 person ml115
  • PAMAM Dendrimers as Delivery Agents for Antisense Oligonucleotides
    Pharmaceutical Research, Vol. 16, No. 12. (1 December 1999), pp. 1799-1804.
    by Hoon Yoo, Peter Sazani, RL Juliano
    posted to nucleic_acids nanotech ccne by sobolevnrm to the group baker-group on 2008-05-08 11:17:42 as read
  • Mechanism and kinetics of pore formation in membranes by water-soluble amphipathic peptides
    Proceedings of the National Academy of Sciences, Vol. 105, No. 13. (1 April 2008), pp. 5087-5092.
    by Ming-Tao Lee, Wei-Chin Hung, Fang-Yu Chen, Huey W Huang
    posted to protein-membrane_interactions biomembranes by sobolevnrm to the group baker-group on 2008-05-08 11:15:23 as read along with 1 person paulschlesinger
  • Rapid Development
    (02 July 1996)
    by Steve Mcconnell
    posted to programming misc by sobolevnrm to the group baker-group on 2008-05-07 12:48:58 as read along with 1 person aku8000
  • Characterization of complexes of oligonucleotides with polyamidoamine starburst dendrimers and effects on intracellular delivery
    Journal of Pharmaceutical Sciences, Vol. 86, No. 6. (1997), pp. 762-764.
    by Robert Delong, Katherine Stephenson, Todd Loftus, Michael Fisher, Suresh Alahari, Arno Nolting, RL Juliano
    posted to nucleic_acids nanotech ccne by sobolevnrm to the group baker-group on 2008-05-07 11:35:40 as read along with 1 person ml115
  • New mechanisms for non-porative ultrasound stimulation of cargo delivery to cell cytosol with targeted perfluorocarbon nanoparticles
    Nanotechnology, Vol. 19, No. 18. (2008), 185102.
    by NR Soman, JN Marsh, GM Lanza, SA Wickline
    posted to ultrasound nanotech emulsions drug_design ccne by sobolevnrm to the group baker-group on 2008-05-07 11:33:36 as read
  • Dielectric Properties Tangential to the Interface in Model Insoluble Monolayers: Theoretical Assessment
    Langmuir, Vol. 24, No. 9. (6 May 2008), pp. 4615-4624.
    by PG Shushkov, SA Tzvetanov, AN Ivanova, AV Tadjer
    posted to solvation electrostatics biomembranes by sobolevnrm to the group baker-group on 2008-05-07 11:28:13 as read
  • PEG as a tool to gain insight into membrane fusion.
    Eur Biophys J, Vol. 36, No. 4-5. (April 2007), pp. 315-326.
    by BR Lentz
    posted to solvation biomembranes by sobolevnrm to the group baker-group on 2008-05-07 11:25:44 as read along with 1 person paulschlesinger
  • Low-Frequency Electrophoretic Actuation of Nanoscale Optoentropic Transduction Mechanisms
    Nano Lett., Vol. 7, No. 4. (11 April 2007), pp. 950-955.
    by BD Sullivan, DA Dehlinger, S Zlatanovic, SA Esener, MJ Heller
    posted to nucleic_acids nanotech imaging ccne by sobolevnrm to the group baker-group on 2008-05-07 11:19:53 as read along with 1 person ml115
  • Oligonucleotide-Modified Gold Nanoparticles for Intracellular Gene Regulation
    Science, Vol. 312, No. 5776. (19 May 2006), pp. 1027-1030.
    by Nathaniel L Rosi, David A Giljohann, Shad C Thaxton, Abigail K Lytton-Jean, Min S Han, Chad A Mirkin
    posted to nucleic_acids nanotech ccne by sobolevnrm to the group baker-group on 2008-05-07 11:18:57 as read along with 1 person ml115
  • Screening the Sequence Selectivity of DNA-Binding Molecules Using a Gold Nanoparticle-Based Colorimetric Approach
    Anal. Chem., Vol. 79, No. 18. (15 September 2007), pp. 7201-7205.
    by SJ Hurst, MS Han, AKR Lytton-Jean, CA Mirkin
    posted to nucleic_acids nanotech ccne by sobolevnrm to the group baker-group on 2008-05-07 11:18:12 as read along with 1 person ml115
  • Maximizing DNA Loading on a Range of Gold Nanoparticle Sizes
    Anal. Chem., Vol. 78, No. 24. (15 December 2006), pp. 8313-8318.
    by SJ Hurst, AKR Lytton-Jean, CA Mirkin
    posted to nucleic_acids nanotech ccne by sobolevnrm to the group baker-group on 2008-05-07 11:17:49 as read along with 1 person ml115
  • Multisegmented One-Dimensional Nanorods Prepared by Hard-Template Synthetic Methods
    Angewandte Chemie International Edition, Vol. 45, No. 17. (2006), pp. 2672-2692.
    by Sarah J Hurst, Emma K Payne, Lidong Qin, Chad A Mirkin
    posted to nanotech ccne by sobolevnrm to the group baker-group on 2008-05-07 11:16:54 as read along with 1 person ml115
  • Silver Nanoparticle-Oligonucleotide Conjugates Based on DNA with Triple Cyclic Disulfide Moieties
    Nano Lett., Vol. 7, No. 7. (11 July 2007), pp. 2112-2115.
    by JS Lee, AKR Lytton-Jean, SJ Hurst, CA Mirkin
    posted to nanotech imaging ccne by sobolevnrm to the group baker-group on 2008-05-07 11:16:30 as read along with 1 person ml115
  • Microarray Detection of Duplex and Triplex DNA Binders with DNA-Modified Gold Nanoparticles
    Anal. Chem., Vol. 79, No. 15. (1 August 2007), pp. 6037-6041.
    by AKR Lytton-Jean, MS Han, CA Mirkin
    posted to nanotech ccne by sobolevnrm to the group baker-group on 2008-05-07 11:16:04 as read along with 1 person ml115
  • Nano-Flares: Probes for Transfection and mRNA Detection in Living Cells
    J. Am. Chem. Soc., Vol. 129, No. 50. (19 December 2007), pp. 15477-15479.
    by DS Seferos, DA Giljohann, HD Hill, AE Prigodich, CA Mirkin
    posted to nanotech imaging ccne by sobolevnrm to the group baker-group on 2008-05-07 11:15:43 as read along with 1 person ml115
  • Locked Nucleic Acid-Nanoparticle Conjugates
    ChemBioChem, Vol. 8, No. 11. (2007), pp. 1230-1232.
    by Dwight S Seferos, David A Giljohann, Nathaniel L Rosi, Chad A Mirkin
    posted to nanotech ccne by sobolevnrm to the group baker-group on 2008-05-07 11:12:47 as read along with 1 person ml115
  • Multiplexed Detection of Protein Cancer Markers with Biobarcoded Nanoparticle Probes
    J. Am. Chem. Soc., Vol. 128, No. 26. (5 July 2006), pp. 8378-8379.
    by SI Stoeva, JS Lee, JE Smith, ST Rosen, CA Mirkin
    posted to nanotech ccne cancer by sobolevnrm to the group baker-group on 2008-05-07 11:12:29 as read along with 1 person ml115
  • Version Control with Subversion
    (15 April 2008)
    by C Pilato, Ben Collins-Sussman, Brian Fitzpatrick
    posted to programming misc by sobolevnrm to the group baker-group on 2008-05-06 22:11:37 as read along with 1 person mmeteo
  • Src Kinase Conformational Activation: Thermodynamics, Pathways, and Mechanisms
    PLoS Computational Biology, Vol. 4, No. 3. (2008), e1000047.
    by S Yang, B Roux
    posted to molecular_simulation allostery by sobolevnrm to the group baker-group on 2008-05-06 11:21:24 as read
  • The influence of curvature on membrane domains
    European Biophysics Journal
    by Jeremy Pencer, Andrew Jackson, Norbert Kučerka, Mu-Ping Nieh, John Katsaras
    posted to biomembranes by sobolevnrm to the group baker-group on 2008-05-06 11:18:58 as read along with 2 people paulschlesinger sunhwan
  • Hydrophobic interactions between methane and a nanoscopic pocket: Three dimensional distribution of potential of mean force revealed by computer simulations
    The Journal of Chemical Physics, Vol. 128, No. 12. (2008)
    by Piotr Setny
    posted to solvation nonpolar by sobolevnrm to the group baker-group on 2008-05-06 11:13:03 as read
  • Oligonucleotide Loading Determines Cellular Uptake of DNA-Modified Gold Nanoparticles
    Nano Lett., Vol. 7, No. 12. (12 December 2007), pp. 3818-3821.
    by DA Giljohann, DS Seferos, PC Patel, JE Millstone, NL Rosi, CA Mirkin
    posted to nanotech imaging ccne by sobolevnrm to the group baker-group on 2008-05-06 11:11:34 as read along with 1 person ml115
  • A Gold Nanoparticle Based Approach for Screening Triplex DNA Binders
    J. Am. Chem. Soc., Vol. 128, No. 15. (19 April 2006), pp. 4954-4955.
    by MS Han, AKR Lytton-Jean, CA Mirkin
    posted to nanotech ccne by sobolevnrm to the group baker-group on 2008-05-06 11:11:00 as read along with 1 person ml115
  • Mastering Your Ph.D.: Goodbye to All That
    Science Careers (2008)
    by P Gosling, B Noordam
    posted to misc career by sobolevnrm to the group baker-group on 2008-05-06 11:10:31 as read along with 1 person sunhwan
  • A new approach for efficient simulation of Coulomb interactions in ionic fluids
    The Journal of Chemical Physics, Vol. 128, No. 12. (2008)
    by Natalia A Denesyuk, John D Weeks
    posted to molecular_simulation electrostatics by sobolevnrm to the group baker-group on 2008-05-06 11:05:56 as read along with 1 person sunhwan
  • PDBML: the representation of archival macromolecular structure data in XML
    Bioinformatics, Vol. 21, No. 7. (01 April 2005), pp. 988-992.
    by Westbrook John, Ito Nobutoshi, Nakamura Haruki, Henrick Kim, M Berman
    posted to structure database bioinformatics by sobolevnrm to the group baker-group on 2008-05-05 21:23:40 as read along with 1 person neils
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