Group: baker-group - with tag biological_systems [149 articles] Export

Recent papers posted by members of the baker-group group with tag biological_systems

	Role of Lysine-256 in Citrobacter freundii Tyrosine Phenol-lyase in Monovalent Cation Activation [My Copy] Biochemistry, Vol. 43, No. 45. (2004), pp. 14412-9. by R. S. Phillips, H. Y. Chen, D. Shim, S. Lima, K. Tavakoli, B. Sundararaju posted to metalloregulation biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:14:06 as
	Synaptic computation [My Copy] Nature, Vol. 431, No. 7010. (2004), pp. 796-803. by L. F. Abbott, W. G. Regehr posted to systems_biology biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:13:41 as
	The challenges of modeling mammalian biocomplexity [My Copy] Nature Biotechnology, Vol. 22, No. 10. (2004), pp. 1268-74. by J. K. Nicholson, E. Holmes, J. C. Lindon, I. D. Wilson posted to systems_biology biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:13:41 as
	Two-dimensional annotation of genomes [My Copy] Nature Biotechnology, Vol. 22, No. 10. (2004), pp. 1218-9. by B. Palsson posted to systems_biology biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:13:41 as
	Unraveling the biochemistry of sweet and umami tastes [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 101, No. 39. (2004), pp. 13972-3. by G. E. Dubois posted to systems_biology biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:13:09 as
	Electrical detection of single viruses [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 101, No. 39. (2004), pp. 14017-22. by F. Patolsky, G. Zheng, O. Hayden, M. Lakadamyali, X. Zhuang, C. M. Lieber posted to biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:13:09 as
	Effects of the Geometry of the Immunological Synapse on the Delivery of Effector Molecules [My Copy] Biophysical Journal, Vol. 87, No. 4. (2004), pp. 2215-20. by D. Coombs, B. Goldstein posted to systems_biology diffusion biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:13:09 as
	Enzymes: By chance, or by design? [My Copy] Nature, Vol. 431, No. 7007. (2004), pp. 396-7. by P. Ball posted to biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:13:09 as
	The Ups and Downs of Modeling the Cell Cycle [My Copy] Current Biology, Vol. 14, No. 18. (2004), pp. R771-R777. by N. T. Ingolia, A. W. Murray posted to systems_biology biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:13:09 as
	Robustness of Cellular Functions [My Copy] Cell, Vol. 118, No. 6. (2004), pp. 675-85. by J. Stelling, U. Sauer, Z. Szallasi, Iii, J. Doyle posted to systems_biology biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:13:08 as
	Reading ratios [My Copy] Nature Structural & Molecular Biology, Vol. 11, No. 9. (2004) by B. Konforti posted to cellular_mechanics biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:13:08 as
	Intrinsic and extrinsic contributions to stochasticity in gene expression [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 99, No. 20. (2002), pp. 12795-800. by P. B. Swain, M. B. Elowitz, E. D. Siggia posted to systems_biology statistical_mechanics mathematics biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:12:47 as
	Stochastic gene expression as a many-body problem [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 100, No. 5. (2003), pp. 2374-9. by M. Sasai, P. G. Wolynes posted to systems_biology statistical_mechanics mathematics biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:12:47 as
	Stochasticity in Transcriptional Regulation: Origins, Consequences, and Mathematical Representations [My Copy] Biophysical Journal, Vol. 81, No. 6. (2001), pp. 3116-36. by T. B. Kepler, T. C. Elston posted to systems_biology statistical_mechanics mathematics biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:12:47 as
	Fluorescence correlation spectroscopy with high-order and dual-color correlation to probe nonequilibrium steady states [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 101, No. 9. (2004), pp. 2828-33. by H. Qian, E. L. Elson posted to systems_biology statistical_mechanics mathematics biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:12:47 as
	Mechanisms of noise-resistance in genetic oscillators [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 99, No. 9. (2002), pp. 5988-92. by J. M. G. Vilar, H. Y. Kueh, N. Barkai, S. Leibler posted to systems_biology statistical_mechanics mathematics biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:12:47 as
	Robustness of circadian rhythms with respect to molecular noise [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 99, No. 2. (2002), pp. 673-8. by D. Gonze, J. Halloy, A. Goldbeter posted to systems_biology statistical_mechanics mathematics biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:12:47 as
	Modeling a synthetic multicellular clock: Repressilators coupled by quorum sensing [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 101, No. 30. (2004), pp. 10955-60. by Garcia J. Ojalvo, M. B. Elowitz, S. H. Strogatz posted to systems_biology statistical_mechanics mathematics biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:12:47 as
	Step one in creating a glycocode [My Copy] Chemistry & Biology, Vol. 11, No. 7. (2004), pp. 891-2. by N. Pohl posted to biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:12:26 as
	Physical schemata underlying biological pattern formation - examples, issues and strategies [My Copy] Physical Biology, Vol. 2, No. 1. (2004), pp. P14-P22. by H. Levine, Ben E. Jacob posted to systems_biology biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:12:26 as
	Using a Quantitative Blueprint to Reprogram the Dynamics of the Flagella Gene Network [My Copy] Cell, Vol. 117 (2004), pp. 713-20. by S. Kalir, U. Alon posted to systems_biology biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:10:27 as
	Metabolic networks: enzyme function and metabolite structure [My Copy] Current Opinion in Structural Biology, Vol. 14, No. 3. (2004), pp. 300-6. by V. Hatzimanikatis, C. Li, J. A. Ionita, L. J. Broadbelt posted to systems_biology biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:10:27 as
	The DNA-unwinding mechanism of the ring helicase of bacteriophage T7 [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 101, No. 19. (2004), pp. 7264-9. by Y. J. Jeong, M. K. Levin, S. S. Patel posted to nucleic_acids biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:09:14 as
	$My PDF lainã\copyright_04_critical.pdf$ Critical assessment of a proposed model of Shaker [My Copy] FEBS Letters, Vol. 564, No. 3. (2004), pp. 257-263. by M. Lainã\copyright, D. M. Papazian, B. Roux posted to structure biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:07:52 as
	Single-molecule assay reveals strand switching and enhanced processivity of UvrD [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 101, No. 17. (2004), pp. 6439-6444. by M. N. Dessinges, T. Lionnet, X. G. Xi, D. Bensimon, V. Croquette posted to nucleic_acids biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:07:52 as
	Structure and mechanism of the RNA polymerase II transcription machinery [My Copy] Nature Structural & Molecular Biology, Vol. 11, No. 5. (2004), pp. 394-403. by S. Hahn posted to structure nucleic_acids biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:07:52 as
	$My PDF lainã\copyright_04_critical.pdf$ Critical assessment of a proposed model of Shaker [My Copy] FEBS Letters, Vol. 564, No. 3. (2004), pp. 257-263. by M. Lainã\copyright, D. M. Papazian, B. Roux posted to structure biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:07:52 as
	Single-molecule assay reveals strand switching and enhanced processivity of UvrD [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 101, No. 17. (2004), pp. 6439-6444. by M. N. Dessinges, T. Lionnet, X. G. Xi, D. Bensimon, V. Croquette posted to nucleic_acids biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:07:52 as
	Structure and mechanism of the RNA polymerase II transcription machinery [My Copy] Nature Structural & Molecular Biology, Vol. 11, No. 5. (2004), pp. 394-403. by S. Hahn posted to structure nucleic_acids biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:07:52 as
	Orchestration of cooperative events in DNA synthesis and repair mechanism unraveled by transition path sampling of DNA polymerase beta's closing [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 101, No. 16. (2004), pp. 5970-5975. by R. Radhakrishnan, T. Schlick posted to nucleic_acids molecular_dynamics biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:06:49 as
	Functional Stoichiometry and Local Enrichment of Calmodulin Interacting with Ca2+ Channels [My Copy] Science, Vol. 304, No. 5669. (2004), pp. 432-435. by M. X. Mori, M. G. Erickson, D. T. Yue posted to diffusion biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:06:14 as
	How viruses enter animal cells [My Copy] Science, Vol. 304, No. 5668. (2004), pp. 237-242. by A. E. Smith, A. Helenius posted to biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:06:14 as
	Discovery of a Novel Binding Trench in HIV Integrase [My Copy] Journal of Medicinal Chemistry, Vol. 47, No. 8. (2004), pp. 1879-1881. by J. R. Schames, R. H. Henchman, J. S. Siegel, C. A. Sotriffer, H. Ni, J. A. Mccammon posted to molecular_dynamics biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:05:56 as
	Designing materials for biology and medicine [My Copy] Nature, Vol. 428, No. 6982. (2004), pp. 487-492. by R. Langer, D. A. Tirrell posted to cellular_mechanics biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:05:56 as
	The arginine finger of bacteriophage T7 gene 4 helicase: Role in energy coupling [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 101, No. 13. (2004), pp. 4373-4378. by D. J. Crampton, S. Guo, D. E. Johnson, C. C. Richardson posted to biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:05:55 as
	Vapor Pressure Osmometry Studies of Osmolyte-Protein Interactions: Implications for the Action of Osmoprotectants in Vivo and for the Interpretation of `"`Osmotic Stress`"` Experiments in Vitro [My Copy] Biochemistry, Vol. 39, No. 15. (2004), pp. 4455-4471. by E. S. Courtenay, M. W. Capp, C. F. Anderson, Jr posted to solvation biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:05:06 as
	Roles of Cytoplasmic Osmolytes, Water, and Crowding in the Response of Escherichia coli to Osmotic Stress: Biophysical Basis of Osmoprotection by Glycine Betaine [My Copy] Biochemistry, Vol. 42, No. 43. (2003), pp. 12596-12609. by S. Cayley, Jr posted to solvation biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:05:06 as
	Biophysical Characterization of Changes in Amounts and Activity of Escherichia coli Cell and Compartment Water and Turgor Pressure in Response to Osmotic Stress [My Copy] Biophysical Journal, Vol. 78, No. 4. (2000), pp. 1748-1764. by D. S. Cayley, H. J. Guttman, Jr posted to solvation biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:05:06 as
	Large changes in cytoplasmic biopolymer concentration with osmolality indicate that macromolecular crowding may regulate protein-DNA interactions and growth rate in osmotically stressed Escherichia coli K-12 [My Copy] (2004) by S. Cayley, Jr posted to solvation biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:05:06 as
	Influence of Monovalent Cation Identity on Parvalbumin Divalent Ion-Binding Properties [My Copy] Biochemistry, Vol. 43, No. 10. (2004) by M. T. Henzl, J. D. Larson, S. Agah posted to electrostatics biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:04:46 as
	Fluorescence Measurements on the E. coli DNA Polymerase Clamp Loader: Implications for Conformational Changes During ATP and Clamp Binding [My Copy] Journal of Molecular Biology, Vol. 336, No. 5. (2004), pp. 1047-1059. by E. R. Goedken, M. Levitus, M. Johnson, et al.A. Johnson, C. Bustamante, M. O'Donnell, J. Kuriyan posted to nucleic_acids biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:04:29 as
	Polymer Models of Protein Stability, Folding, and Interactions [My Copy] Biochemistry, Vol. 43, No. 8. (2004), pp. 2141-2154. by H. X. Zhou posted to protein_folding misc biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:04:29 as
	Computational Modeling of the Catalytic Reaction in Triosephosphate Isomerase [My Copy] Journal of Molecular Biology, Vol. 337, No. 1. (2004), pp. 227-239. by V. Guallar, M. Jacobson, A. Mcdermott, R. A. Friesner posted to biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:04:29 as
	Networking opportunity [My Copy] Nature, Vol. 427, No. 6975. (2004), pp. 601-604. by I. Stewart posted to mathematics biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:03:37 as
	X-Ray Scattering Used to Map the Preferred Collagen Orientation in the Human Cornea and Limbus [My Copy] Structure, Vol. 12 (2004), pp. 249-256. by H. Aghamohammadzadeh, R. H. Newton, K. M. Meek posted to structure biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:03:37 as
	Effect of Crowding on ProteinâProtein Association Rates: Fundamental Differences between Low and High Mass Crowding Agents [My Copy] Journal of Molecular Biology, Vol. 336, No. 3. (2004), pp. 763-774. by N. Kozer, G. Schreiber posted to diffusion biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:02:10 as
	Summing up the noise in gene networks [My Copy] Nature, Vol. 427, No. 6973. (2004), pp. 415-418. by J. Paulsson posted to systems_biology multiscale mathematics biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:02:10 as
	Mechanically driven ATP synthesis by F1-ATPase [My Copy] Nature, Vol. 427, No. 6973. (2004), pp. 465-468. by H. Itoh, A. Takahashi, K. Adachi, et al.H. Noji, R. Yasuda, M. Yoshida, Jr posted to biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:02:10 as
	The 2B domain of the Escherichia coli Rep protein is not required for DNA helicase activity [My Copy] Proc Natl Acad Sci U S A, Vol. 99, No. 25. (2002), pp. 16006-11. by W. Cheng, K. M. Brendza, G. H. Gauss, S. Korolev, G. Waksman, T. M. Lohman posted to structure nucleic_acids biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:01:00 as
	Structure of the DNA binding domain of E. coli SSB bound to ssDNA [My Copy] Nature Structural Biology, Vol. 7, No. 8. (2000), pp. 648-52. by S. Raghunathan, A. G. Kozlov, T. M. Lohman, G. Waksman posted to structure nucleic_acids biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:01:00 as

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