Group: baker-group - with tag diffusion [at least 200 articles] Export

Recent papers posted by members of the baker-group group with tag diffusion

	Radially Projected Finite Elements [My Copy] SIAM Journal on Scientific Computing, Vol. 31, No. 3. (2009), pp. 2368-2385. by Amnon J. Meir, Necibe Tuncer posted to diffusion finite_elements mathematics by sobolevnrm to the group baker-group on 2009-06-09 12:27:50 as
	Darwinian biophysics: Electrostatics and evolution in the kinetics of molecular binding [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 19. (12 May 2009), pp. 7683-7684. by J. Andrew McCammon posted to diffusion electrostatics review by sobolevnrm to the group baker-group on 2009-05-27 12:02:43 as along with 4 people flbarroso apaydin shenjjjj jjray
	On the time taken by random walks on finite groups to visit every state [My Copy] Probability Theory and Related Fields, Vol. 62, No. 3. (1 September 1983), pp. 361-374. by David J. Aldous posted to diffusion kinetics statistical_mechanics by sobolevnrm to the group baker-group on 2009-05-13 12:11:50 as
	Diffusion-controlled reaction on an elliptic site [My Copy] The Journal of Chemical Physics, Vol. 130, No. 17. (2009), 176103. by William Strieder posted to diffusion mathematics by sobolevnrm to the group baker-group on 2009-05-08 12:26:57 as
	Simulating the electrostatic guidance of the vectorial translocations in hexameric helicases and translocases [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 18. (5 May 2009), pp. 7449-7454. by Hanbin Liu, Yemin Shi, Xiaojiang S. Chen, Arieh Warshel posted to diffusion electrostatics protein-nucleic_acid_interactions by sobolevnrm to the group baker-group on 2009-05-07 12:59:56 as along with 1 person and 1 group barry McCammon
	The Reaction-Diffusion Master Equation as an Asymptotic Approximation of Diffusion to a Small Target [My Copy] SIAM Journal on Applied Mathematics, Vol. 70, No. 1. (2009), pp. 77-111. by Samuel A. Isaacson posted to diffusion mathematics by sobolevnrm to the group baker-group on 2009-05-07 12:58:33 as along with 1 person ddcttrl
	Aminoglycoside Association Pathways with the 30S Ribosomal Subunit [My Copy] The Journal of Physical Chemistry B, Vol. 0, No. 0. (0000) by Maciej Długosz, Joanna Trylska posted to diffusion protein-ligand_interactions ribosome by sobolevnrm to the group baker-group on 2009-04-30 12:16:51 as along with 1 person and 1 group jmccammon McCammon
	Dissection of the high rate constant for the binding of a ribotoxin to the ribosome [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 17. (28 April 2009), pp. 6974-6979. by Sanbo Qin, Huan-Xiang Zhou posted to diffusion electrostatics ribosome by sobolevnrm to the group baker-group on 2009-04-29 12:27:38 as
	Bulk-mediated surface diffusion along a cylinder: Propagators and crossovers [My Copy] Physical Review E (Statistical, Nonlinear, and Soft Matter Physics), Vol. 79, No. 4. (2009), 040105. by Aleksei V. Chechkin, Irwin M. Zaid, Michael A. Lomholt, Igor M. Sokolov, Ralf Metzler posted to diffusion protein-nucleic_acid_interactions by sobolevnrm to the group baker-group on 2009-04-28 12:22:33 as
	Effect of Surface Charge on Colloidal Charge Reversal [My Copy] The Journal of Physical Chemistry B (22 April 2009), 090422124644022. by A. Martiìn-Molina, C. Rodriìguez-Beas, R. Hidalgo-Aìlvarez, M. Quesada-Peìrez posted to beyond_mean_field diffusion electrostatics statistical_mechanics by sobolevnrm to the group baker-group on 2009-04-23 12:32:20 as
	An [script O](N[sup 2]) approximation for hydrodynamic interactions in Brownian dynamics simulations [My Copy] The Journal of Chemical Physics, Vol. 130, No. 11. (2009), 114905. by Tihamér Geyer, Uwe Winter posted to diffusion hydrodynamics kinetics molecular_dynamics solvation by sobolevnrm to the group baker-group on 2009-04-20 12:33:18 as
	Conductimetric determination of thermodynamic pairing constants for symmetrical electrolytes [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 77, No. 1. (January 1980), pp. 34-38. by Raymond M. Fuoss posted to diffusion electrostatics solvation by sobolevnrm to the group baker-group on 2009-04-17 13:03:16 as
	Conductance-concentration function for associated symmetrical electrolytes [My Copy] The Journal of Physical Chemistry, Vol. 79, No. 18. (1 August 1975), pp. 1983-1983. by Raymond M. Fuoss posted to diffusion electrostatics solvation by sobolevnrm to the group baker-group on 2009-04-17 13:03:08 as
	Transition Cases in the Distribution of Ions [My Copy] Journal of the American Chemical Society, Vol. 57, No. 12. (1 December 1935), pp. 2604-2607. by Raymond M. Fuoss posted to diffusion electrostatics solvation by sobolevnrm to the group baker-group on 2009-04-17 13:03:00 as
	Equation-Free Multiscale Computation: Algorithms and Applications [My Copy] Annual Review of Physical Chemistry, Vol. 60, No. 1. (2009), pp. 321-344. by Ioannis G. Kevrekidis, Giovanni Samaey posted to diffusion mathematics multiscale review by sobolevnrm to the group baker-group on 2009-04-01 12:55:10 as along with 2 people Borelli nurban
	Phase-field modeling of the dynamics of multicomponent vesicles: Spinodal decomposition, coarsening, budding, and fission [My Copy] Physical Review E (Statistical, Nonlinear, and Soft Matter Physics), Vol. 79, No. 3. (2009), 031926. by John S. Lowengrub, Andreas Rätz, Axel Voigt posted to biomembranes diffusion mathematics by sobolevnrm to the group baker-group on 2009-04-01 12:54:49 as
	Convergence rate for numerical computation of the lattice Green's function [My Copy] Physical Review E (Statistical, Nonlinear, and Soft Matter Physics), Vol. 79, No. 3. (2009), 037701. by M. Ghazisaeidi, D. R. Trinkle posted to diffusion electrostatics mathematics by sobolevnrm to the group baker-group on 2009-03-27 11:55:46 as along with 1 person michaelbussmann
	Drift-Diffusion Past a Circle: Shadow Region Asymptotics [My Copy] SIAM Journal on Applied Mathematics, Vol. 69, No. 6. (2009), pp. 1559-1579. by Sean Lynch, Charles Knessl posted to diffusion mathematics by sobolevnrm to the group baker-group on 2009-03-26 11:35:51 as
	Quasielastic neutron scattering investigation of motion of water molecules in n-propyl alcohol-water mixture [My Copy] The Journal of Chemical Physics, Vol. 130, No. 7. (2009), 074503. by Masaru Nakada, Kenji Maruyama, Osamu Yamamuro, Masakatsu Misawa posted to diffusion kinetics solvation statistical_mechanics by sobolevnrm to the group baker-group on 2009-03-24 12:22:32 as
	High frequency dynamics in liquids and supercritical fluids: A comparative inelastic x-ray scattering study [My Copy] The Journal of Chemical Physics, Vol. 130, No. 6. (2009), 064501. by F. Bencivenga, A. Cunsolo, M. Krisch, G. Monaco, G. Ruocco, F. Sette posted to diffusion kinetics solvation statistical_mechanics by sobolevnrm to the group baker-group on 2009-03-22 14:03:53 as
	Fundamental Aspects of Protein−Protein Association Kinetics [My Copy] Chemical Reviews, Vol. 109, No. 3. (11 March 2009), pp. 839-860. by G. Schreiber, G. Haran, H. X. Zhou posted to diffusion kinetics protein-protein_interactions review by sobolevnrm to the group baker-group on 2009-03-20 11:51:02 as along with 10 people and 1 group anuragsethi barry sunhwan jmccammon willard kafuitay carlosjavierna sschurer hadesnumb paulschlesinger McCammon
	Solvation Dynamics in Polar Solvents Studied by Means of RISM/Mode-Coupling Theory [My Copy] The Journal of Physical Chemistry B, Vol. 113, No. 9. (5 March 2009), pp. 2800-2804. by Katsura Nishiyama, Tsuyoshi Yamaguchi, Fumio Hirata posted to diffusion integral_equation kinetics solvation statistical_mechanics by sobolevnrm to the group baker-group on 2009-03-20 11:50:06 as along with 1 person willard
	Striking Effects of Hydrodynamic Interactions on the Simulated Diffusion and Folding of Proteins [My Copy] Journal of Chemical Theory and Computation, Vol. 5, No. 2. (10 February 2009), pp. 242-256. by Tamara Frembgen-Kesner, Adrian H. Elcock posted to diffusion protein-protein_interactions protein_folding solvation by sobolevnrm to the group baker-group on 2009-03-19 12:06:25 as along with 2 people and 1 group barry jmccammon McCammon
	Multidimensional Langevin modeling of biomolecular dynamics [My Copy] The Journal of Chemical Physics, Vol. 130, No. 3. (2009), 034106. by Rainer Hegger, Gerhard Stock posted to diffusion kinetics multiscale quasiharmonic_models by sobolevnrm to the group baker-group on 2009-03-18 11:28:11 as along with 1 person Diego_Prada
	Protein Sliding along DNA: Dynamics and Structural Characterization [My Copy] Journal of Molecular Biology, Vol. 385, No. 4. (30 January 2009), pp. 1087-1097. by O. Givaty, Y. Levy posted to diffusion protein-nucleic_acid_interactions by sobolevnrm to the group baker-group on 2009-03-18 11:22:43 as along with 2 people barry reyez
	Subdiffusion and lateral diffusion coefficient of lipid atoms and molecules in phospholipid bilayers [My Copy] Physical Review E (Statistical, Nonlinear, and Soft Matter Physics), Vol. 79, No. 1. (2009), 011907. by Elijah Flenner, Jhuma Das, Maikel C. Rheinstädter, Ioan Kosztin posted to biomembranes diffusion by sobolevnrm to the group baker-group on 2009-03-13 11:26:39 as along with 3 people georgwachter ruvido softsimu
	Photosynthetic apparatus of purple bacteria [My Copy] Quarterly Reviews of Biophysics, Vol. 35, No. 01. (2002), pp. 1-62. by Xiche Hu, Thorsten Ritz, Ana Damjanovic, Felix Autenrieth, Klaus Schulten posted to diffusion review systems_biology by sobolevnrm to the group baker-group on 2009-03-13 11:20:36 as
	Dynamics of protein-protein encounter: A Langevin equation approach with reaction patches [My Copy] The Journal of Chemical Physics, Vol. 129, No. 15. (2008) by Jakob Schluttig, Denitsa Alamanova, Volkhard Helms, Ulrich S. Schwarz posted to diffusion kinetics protein-protein_interactions by sobolevnrm to the group baker-group on 2009-03-12 12:33:01 as along with 3 people and 1 group anuragsethi barry jmccammon McCammon
	Thermoelectric effect on charged colloids in the Hückel limit [My Copy] The European Physical Journal E: Soft Matter and Biological Physics by J. Morthomas, A. Würger posted to diffusion solvation statistical_mechanics by sobolevnrm to the group baker-group on 2009-03-05 12:33:19 as
	Dynamic Structure Factors from Lipid Membrane Molecular Dynamics Simulations [My Copy] Biophysical Journal, Vol. 96, No. 5. (04 March 2009), pp. 1828-1838. by Erik G. Brandt, Olle Edholm posted to biomembranes diffusion integral_equation statistical_mechanics by sobolevnrm to the group baker-group on 2009-03-05 12:33:02 as along with 1 person paulschlesinger
	Static and dynamic correlations in water at hydrophobic interfaces [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 51. (23 December 2008), pp. 20130-20135. by Jeetain Mittal, Gerhard Hummer posted to diffusion integral_equation nonpolar solvation by sobolevnrm to the group baker-group on 2009-03-04 13:06:44 as along with 1 person sunrise
	Stagnation of Flow in Protein Cavities by Boundary Element Microhydrodynamics† [My Copy] The Journal of Physical Chemistry B, Vol. 113, No. 9. (5 March 2009), pp. 2657-2663. by Sergio R. Aragon, David K. Hahn posted to diffusion solvation by sobolevnrm to the group baker-group on 2009-03-04 13:06:18 as
	Multiple Markov transition matrix method: Obtaining the stationary probability distribution from multiple simulations [My Copy] Journal of Computational Chemistry, Vol. 9999, No. 9999. (2008), NA. by Shun Sakuraba, Akio Kitao posted to diffusion kinetics statistical_mechanics by sobolevnrm to the group baker-group on 2009-03-03 15:52:52 as
	Numerical solution of some partial differential equations by means of a deterministic method of approximate functional integration [My Copy] Numerische Mathematik by V. Rushai posted to diffusion electrostatics mathematics by sobolevnrm to the group baker-group on 2009-02-28 21:46:24 as
	Chapter 4 Modeling Protein–Protein and Protein–Nucleic Acid Interactions: Structure, Thermodynamics, and Kinetics [My Copy] Annual Reports in Computational Chemistry, Vol. 4 (2008), pp. 67-87. by H. Zhou, S. Qin, H. Tjong posted to diffusion kinetics protein-nucleic_acid_interactions protein-protein_interactions review by sobolevnrm to the group baker-group on 2009-02-18 12:31:58 as along with 1 person and 1 group A_Coletta_Thesis Structural Biology Group TorVergata
	Theory of the generalized dynamic structure factor of polyatomic molecular fluids measured by inelastic x-ray scattering [My Copy] Physical Review E, Vol. 64, No. 2. (26 July 2001), 021205. by Ciya Liao, Sow-Hsin Chen posted to diffusion experimental_methodology kinetics solvation statistical_mechanics by sobolevnrm to the group baker-group on 2009-01-28 13:12:37 as
	Dynamic radial distribution function from inelastic neutron scattering [My Copy] Physical Review B, Vol. 57, No. 17. (1 May 1998), 10560. by R. J. Mcqueeney posted to diffusion experimental_methodology kinetics solvation statistical_mechanics by sobolevnrm to the group baker-group on 2009-01-28 13:11:19 as
	Interaction between two nearby diffusion-controlled reactive sites in a plane [My Copy] The Journal of Chemical Physics, Vol. 129, No. 13. (2008) by William Strieder posted to diffusion mathematics by sobolevnrm to the group baker-group on 2009-01-16 12:45:44 as
	Hydrodynamic modeling of diffusion tensor properties of flexible molecules [My Copy] Journal of Computational Chemistry, Vol. 9999, No. 9999. (2008), NA. by Vincenzo Barone, Mirco Zerbetto, Antonino Polimeno posted to diffusion solvation by sobolevnrm to the group baker-group on 2008-07-22 11:43:12 as along with 1 person and 1 group A_Coletta_Thesis Structural Biology Group TorVergata
	Theory of Dielectric Relaxation in Polar Liquids [My Copy] The Journal of Chemical Physics, Vol. 52, No. 12. (1970), pp. 6353-6363. by Tsu W. Nee, Robert Zwanzig posted to diffusion electrostatics solvation statistical_mechanics by sobolevnrm to the group baker-group on 2008-07-17 22:39:18 as
	Tortuosity and anomalous diffusion in the neuromuscular junction [My Copy] Physical Review E (Statistical, Nonlinear, and Soft Matter Physics), Vol. 77, No. 4. (2008) by Daniel J. Lacks posted to diffusion neuromuscular_junctions by sobolevnrm to the group baker-group on 2008-07-10 12:04:33 as
	Atomic level computational identification of ligand migration pathways between solvent and binding site in myoglobin [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 27. (2008), pp. 9204-9209. by J. Z. Ruscio, D. Kumar, M. Shukla, M. G. Prisant, T. M. Murali, A. V. Onufriev posted to allostery diffusion molecular_dynamics by sobolevnrm to the group baker-group on 2008-07-09 02:31:01 as
	An Electrostatic Steering Mechanism of Cdc42 Recognition by Wiskott-Aldrich Syndrome Proteins [My Copy] Molecular Cell, Vol. 20, No. 2. (28 October 2005), pp. 313-324. by Lars Hemsath, Radovan Dvorsky, Dennis Fiegen, Marie-France Carlier, Mohammad R. Ahmadian posted to diffusion electrostatics kinetics protein-protein_interactions by sobolevnrm to the group baker-group on 2008-07-01 02:55:17 as along with 1 person mikaellund
	Glasslike behavior in aqueous electrolyte solutions [My Copy] The Journal of Chemical Physics, Vol. 128, No. 16. (2008) by David A. Turton, Johannes Hunger, Glenn Hefter, Richard Buchner, Klaas Wynne posted to diffusion experimental_methodology solvation by sobolevnrm to the group baker-group on 2008-06-05 11:53:46 as along with 1 person klaaswynne
	Coarse-grained molecular simulation of diffusion and reaction kinetics in a crowded virtual cytoplasm [My Copy] Biophys. J. (30 January 2008), biophysj.107.116053. by Douglas Ridgway, Gordon Broderick, Ana Lopez-Campistrous, et al.Melania Ru'aini, Philip Winter, Matthew Hamilton, Pierre Boulanger, Andriy Kovalenko, Michael J. Ellison posted to diffusion multiscale by sobolevnrm to the group baker-group on 2008-05-27 11:40:19 as along with 4 people ocs ras paulschlesinger arjunan
	Controlling the rates of biochemical reactions and signaling networks by shape and volume changes [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 11. (18 March 2008), pp. 4099-4104. by L. Lizana, B. Bauer, O. Orwar posted to diffusion systems_biology by sobolevnrm to the group baker-group on 2008-05-19 11:22:52 as along with 1 person rmorenoe
	Association of Aminoglycosidic Antibiotics with the Ribosomal A-Site Studied with Brownian Dynamics [My Copy] J. Chem. Theory Comput., Vol. 4, No. 4. (8 April 2008), pp. 549-559. by Maciej Długosz, Jan M. Antosiewicz, Joanna Trylska posted to diffusion electrostatics nucleic_acids by sobolevnrm to the group baker-group on 2008-05-12 12:08:14 as along with 1 person and 1 group barry McCammon
	Protein diffusion on charged membranes: A dynamic mean-field model describes time evolution and lipid reorganization [My Copy] Biophys. J. (7 December 2007), biophysj.107.120667. by George Khelashvili, Harel Weinstein, Daniel Harries posted to apbs biomembranes diffusion electrostatics by sobolevnrm to the group baker-group on 2008-04-22 11:30:31 as along with 1 person paulschlesinger
	Transition networks for modeling the kinetics of conformational change in macromolecules [My Copy] Current Opinion in Structural Biology In Theory and simulation / Macromolecular assemblages, Vol. 18, No. 2. (April 2008), pp. 154-162. by Frank Noé, Stefan Fischer posted to allostery diffusion kinetics molecular_simulation by sobolevnrm to the group baker-group on 2008-04-18 11:47:00 as along with 5 people and 2 groups Diego_Prada aqeel barry paulschlesinger toerst structural_bioinformatics McCammon
	Calculating enzyme kinetic parameters from protein structures [My Copy] Biochemical Society Transactions, Vol. 36 (2008), pp. 51-54. by M. Stein, R. R. Gabdoulline, R. C. Wade posted to diffusion electrostatics kinetics structure by sobolevnrm to the group baker-group on 2008-04-18 11:32:23 as

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review	48
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stochastic	29
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restrdiff	28
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random_walks	13
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Group: baker-group - with tag diffusion [at least 200 articles] Export

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