Group: baker-group - with tag metalloregulation [90 articles] Export

Recent papers posted by members of the baker-group group with tag metalloregulation

	Engineering A Uranyl-Specific Binding Protein from NikR13 [My Copy] Angewandte Chemie International Edition, Vol. 48, No. 13. (2009), pp. 2339-2341. by Seraphine v, Hande Boyaci, Hao Chen, Mark p, Chuan He posted to metalloregulation nikr protein_engineering by sobolevnrm to the group baker-group on 2009-04-27 11:36:42 as along with 1 person jwm
	The "metallo-specific" response of proteins: A perspective based on the Escherichia coli transcriptional regulator NikR [My Copy] Dalton Trans. (2009) by Sheila C. Wang, Alistair V. Dias, Deborah B. Zamble posted to metalloregulation nikr review by sobolevnrm to the group baker-group on 2009-03-19 12:12:22 as
	pH-Responsive DNA-Binding Activity of Helicobacter pylori NikR† [My Copy] Biochemistry, Vol. 48, No. 11. (24 March 2009), pp. 2486-2496. by Yanjie Li, Deborah B. Zamble posted to metalloregulation nikr pka protein-nucleic_acid_interactions by sobolevnrm to the group baker-group on 2009-03-19 12:08:30 as
	Helicobacter pylori NikR’s Interaction with DNA: A Two-Tiered Mode of Recognition† [My Copy] Biochemistry, Vol. 48, No. 3. (27 January 2009), pp. 527-536. by Nuvjeevan S. Dosanjh, Abby L. West, Sarah L. Michel posted to metalloregulation nikr protein-nucleic_acid_interactions by sobolevnrm to the group baker-group on 2009-03-03 15:58:19 as
	Sub-micromolar affinity of Escherichia coli NikR for Ni(II) [My Copy] Chemical Communications (2008), pp. 1813-1815. by R. E. M. Diederix, C. Fauquant, A. Rodrigue, M. A. Mandrand-Berthelot, I. Michaud-Soret posted to metalloregulation by sobolevnrm to the group baker-group on 2008-06-26 11:54:11 as
	Molecular Dynamics Simulation of the Escherichia coli NikR Protein: Equilibrium Conformational Fluctuations Reveal Interdomain Allosteric Communication Pathways [My Copy] Journal of Molecular Biology, Vol. 378, No. 5. (16 May 2008), pp. 1155-1173. by Michael J. Bradley, Peter T. Chivers, Nathan A. Baker posted to allostery metalloregulation molecular_dynamics by sobolevnrm to the group baker-group on 2008-04-26 14:52:57 as along with 2 people and 1 group skoddet barry structural_bioinformatics
	Metal-Coupled Folding of Cys2His2 Zinc-Finger [My Copy] J. Am. Chem. Soc., Vol. 130, No. 3. (23 January 2008), pp. 892-900. by W. Li, J. Zhang, J. Wang, W. Wang posted to metalloregulation molecular_simulation protein_folding by sobolevnrm to the group baker-group on 2008-02-20 12:47:57 as
	The Intrinsic Dynamics and Function of Nickel Binding Regulatory Protein: Insights from Elastic Network Analysis [My Copy] Biophys. J. (28 January 2008), biophysj.107.115576. by Guanglei Cui, Kenneth Merz posted to metalloregulation molecular_simulation quasiharmonic-models_elastic-network_gnm_nma_pca_etc by sobolevnrm to the group baker-group on 2008-02-04 14:29:37 as along with 1 person aqeel
	Structural Basis of the Metal Specificity for Nickel Regulatory Protein NikR, [My Copy] Biochemistry (15 January 2008) by C. M. Phillips, E. R. Schreiter, Y. Guo, S. C. Wang, D. B. Zamble, C. L. Drennan posted to metalloregulation structure by sobolevnrm to the group baker-group on 2008-01-15 12:53:08 as
	Modeling of metal interaction geometries for protein-ligand docking [My Copy] Proteins: Structure, Function, and Bioinformatics, Vol. 9999, No. 9999. (2007), NA. by Birte Seebeck, Ingo Reulecke, Andreas Kämper, Matthias Rarey posted to bioinformatics metalloregulation protein-ligand_interactions by sobolevnrm to the group baker-group on 2007-12-27 12:17:57 as along with 2 people and 1 group BragilMassoud arlam Chang group
	The N-terminal Arm of the Helicobacter pylori Ni2+-dependent Transcription Factor NikR Is Required for Specific DNA Binding [My Copy] J. Biol. Chem., Vol. 282, No. 28. (13 July 2007), pp. 20365-20375. by Erin L. Benanti, Peter T. Chivers posted to metalloregulation by sobolevnrm to the group baker-group on 2007-09-17 01:50:31 as
	Prediction of transition metal-binding sites from apo protein structures [My Copy] Proteins (in press) by M. Babor, S. Gerzon, B. Raveh, V. Sobolev, M. Edelman posted to structure_prediction software metalloregulation bioinformatics by sobolevnrm to the group baker-group on 2007-08-06 14:33:01 as
	Metal sensor proteins: nature's metalloregulated allosteric switches [My Copy] Dalton Transactions (2007), pp. 3107-3120. by D. P. Giedroc, A. I. Arunkumar posted to metalloregulation by sobolevnrm to the group baker-group on 2007-07-19 13:30:05 as
	Parameter Calibration of Transition-Metal Elements for the Spin-Polarized Self-Consistent-Charge Density-Functional Tight-Binding (DFTB) Method: Sc, Ti, Fe, Co, and Ni [My Copy] Journal of Chemical Theory and Computation, Vol. 3, No. 4. (2007), pp. 1349-67. by G. Zheng, H. A. Witek, Bobadova P. Parvanova, et al.S. Irle, D. G. Musaev, R. Prabhakar, K. Morokuma, M. Lundberg, M. Elstner, C. Köhler, T. Frauenheim posted to quantum_mechanics molecular_simulation metalloregulation by sobolevnrm to the group baker-group on 2007-07-15 22:17:37 as
	The Ni2+ binding properties of Helicobacter pylori NikR [My Copy] Chemical Communications (in press) by B. Zambelli, M. Bellucci, A. Danielli, V. Scarlato, S. Ciurli posted to metalloregulation by sobolevnrm to the group baker-group on 2007-07-02 13:18:46 as
	The N-terminal arm of the Helicobacter pylori Ni2+-dependent transcription factor NikR is required for specific DNA-binding [My Copy] Journal of Biological Chemistry (in press) by E. L. Benanti, P. T. Chivers posted to metalloregulation by sobolevnrm to the group baker-group on 2007-05-29 12:22:59 as
	NikA Binds Heme: A New Role for an Escherichia coli Periplasmic Nickel-Binding Protein [My Copy] Biochemistry, Vol. 46, No. 17. (2007), pp. 5030-7. by M. Shepard, M. D. Heath, R. K. Poole posted to metalloregulation by sobolevnrm to the group baker-group on 2007-05-25 14:37:08 as
	Networks of Coupled Rotators: Relationship between Structures and Internal Dynamics in Metal-Binding Proteins. Applications to apo- and holo-Calbindin [My Copy] Journal of the American Chemical Society, Vol. 129, No. 16. (2007), pp. 4998-5006. by A. Dhulesia, D. Abergel, G. Bodenhausen posted to quasiharmonic-models_elastic-network_gnm_nma_pca_etc metalloregulation by sobolevnrm to the group baker-group on 2007-05-25 14:37:07 as
	Nickel-Specific Response in the Transcriptional Regulator, Escherichia coli NikR [My Copy] Journal of the American Chemical Society (in press) by S. Leitch, M. J. Bradley, J. L. Rowe, P. T. Chivers, M. J. Maroney posted to metalloregulation by sobolevnrm to the group baker-group on 2007-05-25 14:37:06 as
	Conservation of metal-coordinating residues [My Copy] Proteins (in press) by I. N. Kasampalidis, I. Pitas, K. Lyroudia posted to metalloregulation bioinformatics by sobolevnrm to the group baker-group on 2007-05-25 14:37:06 as
	Establishing the entatic state in folding metallated Pseudomonas aeruginosa azurin [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 104, No. 9. (2007), pp. 3159-64. by C. Zong, C. J. Wilson, T. Shen, Wittung P. Stafshede, S. L. Mayo, P. G. Wolynes posted to protein_folding protein_engineering metalloregulation allostery by sobolevnrm to the group baker-group on 2007-05-25 14:36:48 as
	Characterization of the Helicobacter pylori NikR-PureA DNA Interaction: Metal Ion Requirements and Sequence Specificity [My Copy] Biochemistry (in press) by N. S. Dosanjh, N. A. Hammerbacher, S. L. J. Michel posted to metalloregulation by sobolevnrm to the group baker-group on 2007-05-25 14:36:28 as
	The ACT Domain: A Small Molecule Binding Domain and Its Role as a Common Regulatory Element [My Copy] Journal of Biological Chemistry, Vol. 281, No. 45. (2006), pp. 33825-9. by G. A. Grant posted to structure metalloregulation allostery by sobolevnrm to the group baker-group on 2007-05-25 14:36:04 as
	Nickel-binding and accessory proteins facilitating Ni-enzyme maturation in Helicobacter pylori [My Copy] BioMetals (in press) by R. J. Maier, S. L. Benoit, S. Seshadri posted to metalloregulation by sobolevnrm to the group baker-group on 2007-05-25 14:36:04 as
	Modeling the charge distribution at metal sites in proteins for molecular dynamics simulations [My Copy] Journal of Structural Biology (in press) by Dal M. Peraro, K. Spiegel, G. Lamoureux, M. De Vivo, W. F. Degrado, M. L. Klein posted to quantum_mechanics metalloregulation by sobolevnrm to the group baker-group on 2007-05-25 14:36:04 as
	Iron(II) triggered conformational changes in Escherichia coli fur upon DNA binding: a study using molecular modeling [My Copy] Journal of Molecular Graphics and Modelling, Vol. 25, No. 2. (2006), pp. 234-46. by M. Y. Hamed, Al S. Jabour posted to molecular_dynamics metalloregulation by sobolevnrm to the group baker-group on 2007-05-25 14:23:19 as
	Nickel homeostasis in Escherichia coli âthe rcnR-rcnA efflux pathway and its linkage to NikR function [My Copy] Molecular Microbiology, Vol. 62, No. 1. (2006), pp. 252-62. by J. S. Iwig, J. L. Rowe, P. T. Chivers posted to metalloregulation by sobolevnrm to the group baker-group on 2007-05-25 14:23:19 as
	NikR-operator complex structure and the mechanism of repressor activation by metal ions [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 103, No. 37. (2006), pp. 13676-81. by E. R. Schreiter, S. C. Wang, D. B. Zamble, C. L. Drennan posted to structure metalloregulation by sobolevnrm to the group baker-group on 2007-05-25 14:23:18 as
	Metal-Protein Interactions: Structure Information from Ni2+-Induced Pseudocontact Shifts in a Native Nonmetalloprotein [My Copy] Biochemistry, Vol. 45, No. 29. (2006), pp. 8782-7. by M. R. Jensen, J. J. Led posted to metalloregulation by sobolevnrm to the group baker-group on 2007-05-25 14:23:17 as
	Quantum mechanical and molecular dynamics simulations of ureases and Zn beta-lactamases [My Copy] Journal of Computational Chemistry, Vol. 27, No. 12. (2006), pp. 1240-62. by G. Estiu, D. Suã!'rez, Jr posted to molecular_dynamics metalloregulation by sobolevnrm to the group baker-group on 2007-05-25 14:23:17 as
	Characterization of Ni transport into brush border membrane vesicles (BBMVs) isolated from the kidney of the freshwater rainbow trout (Oncorhynchus mykiss) [My Copy] Biochimica et biophysica acta (BBA) - Biomembranes, Vol. 1758, No. 1. (2006), pp. 74-84. by E. F. Pane, C. N. Glover, M. Patel, C. M. Wood posted to metalloregulation biomembranes by sobolevnrm to the group baker-group on 2007-05-25 14:22:19 as
	Microbial nickel metalloregulation: NikRs for nickel ions [My Copy] Current Opinion in Chemical Biology (in press) by N. S. Dosanjh, S. L. J. Michel posted to metalloregulation by sobolevnrm to the group baker-group on 2007-05-25 14:19:55 as
	LigandâMetal Ion Binding to Proteins: Investigation by ESI Mass Spectrometry [My Copy] Methods in Enzymology, Vol. 402 (2005), pp. 361-89. by N. Potier, H. Rogniaux, G. Chevreux, A. Van Dorsselaer posted to metalloregulation experimental_methodology by sobolevnrm to the group baker-group on 2007-05-25 14:19:27 as
	Reconstruction of regulatory and metabolic pathways in metal-reducing Î´-proteobacteria [My Copy] Genome Biology, Vol. 5, No. 11. (2004) by D. A. Rodionov, I. Dubchak, A. Arkin, E. Alm, M. S. Gelfand posted to metalloregulation by sobolevnrm to the group baker-group on 2007-05-25 14:19:26 as
	The metal- and DNA-binding activities of Helicobacter pylori NikR [My Copy] Journal of Inorganic Biochemistry (in press) by L. O. Abraham, Y. Li, D. B. Zamble posted to metalloregulation by sobolevnrm to the group baker-group on 2007-05-25 14:19:26 as
	Structural Studies of an Engineered Zinc Biosensor Reveal an Unanticipated Mode of Zinc Binding [My Copy] Journal of Molecular Biology, Vol. 354, No. 4. (2005), pp. 829-40. by P. G. Telmer, B. H. Shilton posted to protein_engineering metalloregulation by sobolevnrm to the group baker-group on 2007-05-25 14:19:26 as
	The Nickel-Responsive Regulator NikR Controls Activation and Repression of Gene Transcription in Helicobacter pylori [My Copy] Infection and Immunity, Vol. 73, No. 11. (2005), pp. 7252-8. by F. D. Ernst, E. J. Kuipers, A. Heijens, et al.R. Sarwari, J. Stoof, C. W. Penn, J. G. Kusters, A. H. M. van Vliet posted to metalloregulation by sobolevnrm to the group baker-group on 2007-05-25 14:19:26 as
	In Vitro Analysis of Protein-Operator Interactions of the NikR and Fur Metal-Responsive Regulators of Coregulated Genes in Helicobacter pylori [My Copy] Journal of Bacteriology, Vol. 187, No. 22. (2005), pp. 7703-15. by I. Delany, R. Ieva, A. Soragni, M. Hilleringmann, R. Rappuoli, V. Scarlato posted to metalloregulation by sobolevnrm to the group baker-group on 2007-05-25 14:19:26 as
	Understanding How Cells Allocate Metals Using Metal Sensors and Metallochaperones [My Copy] Accounts of Chemical Research, Vol. 38, No. 10. (2005), pp. 775-83. by S. Tottey, D. R. Harvie, N. J. Robinson posted to metalloregulation by sobolevnrm to the group baker-group on 2007-05-25 14:18:49 as
	Single-Atom Test of All-Atom Empirical Potentials: Fe in Myoglobin [My Copy] Journal of Physical Chemistry B, Vol. 190, No. 40. (2005), pp. 18983-7. by B. K. Rai, E. W. Prohofsky, S. M. Durbin posted to quantum_mechanics molecular_dynamics metalloregulation by sobolevnrm to the group baker-group on 2007-05-25 14:18:44 as
	Acid-Induced Activation of the Urease Promoters Is Mediated Directly by the ArsRS Two-Component System of Helicobacter pylori [My Copy] Infection and Immunity, Vol. 73, No. 10. (2005), pp. 6437-45. by M. Pflock, S. Kennard, I. Delany, V. Scarlato, D. Beier posted to metalloregulation by sobolevnrm to the group baker-group on 2007-05-25 14:18:43 as
	Structural Determinants of Metal Selectivity in Prokaryotic Metal-responsive Transcriptional Regulators [My Copy] Biometals, Vol. 18, No. 4. (2005), pp. 413-28. by M. A. Pennella, D. P. Giedroc posted to metalloregulation by sobolevnrm to the group baker-group on 2007-05-25 14:18:43 as
	Complex Transcriptional Control Links NikABCDE-Dependent Nickel Transport with Hydrogenase Expression in Escherichia coli [My Copy] Journal of Bacteriology, Vol. 187, No. 18. (2005), pp. 6317-23. by J. L. Rowe, G. L. Starnes, P. T. Chivers posted to metalloregulation by sobolevnrm to the group baker-group on 2007-05-25 14:18:43 as
	Protease digestion analysis of Escherichia coli NikR: evidence for conformational stabilization with Ni(II) [My Copy] Journal of Biological Inorganic Chemistry (2005) by A. V. Dias, D. B. Zamble posted to metalloregulation by sobolevnrm to the group baker-group on 2007-05-25 14:18:43 as
	Structure of Pyrococus horikoshii NikR: nickel sensing and implications for the regulation of DNA recognition. [My Copy] Journal of Molecular Biology, Vol. 348, No. 3. (2005), pp. 597-607. by P. T. Chivers, T. H. Tahirov posted to structure metalloregulation by sobolevnrm to the group baker-group on 2007-05-25 14:15:19 as
	Structural insights into proteinâmetal ion partnerships [My Copy] Current Opinion in Structural Biology, Vol. 14, No. 6. (2004), pp. 765-74. by D. P. Barondeau, E. D. Getzoff posted to structure metalloregulation by sobolevnrm to the group baker-group on 2007-05-25 14:14:50 as
	Role of Lysine-256 in Citrobacter freundii Tyrosine Phenol-lyase in Monovalent Cation Activation [My Copy] Biochemistry, Vol. 43, No. 45. (2004), pp. 14412-9. by R. S. Phillips, H. Y. Chen, D. Shim, S. Lima, K. Tavakoli, B. Sundararaju posted to metalloregulation biological_systems by sobolevnrm to the group baker-group on 2007-05-25 14:14:06 as
	Predicting Metal-binding Site Residues in Low-resolution Structural Models [My Copy] Journal of Molecular Biology, Vol. 342, No. 1. (2004), pp. 307-20. by J. S. Sodhi, K. Bryson, L. J. Mcguffin, J. J. Ward, L. Wernisch, D. T. Jones posted to protein-ligand_interactions metalloregulation electrostatics bioinformatics by sobolevnrm to the group baker-group on 2007-05-25 14:13:08 as
	Metal-Selective DNA-Binding Response of Escherichia coli NikR [My Copy] Biochemistry, Vol. 43, No. 31. (2004), pp. 10029-38. by S. L. Bloom, D. B. Zamble posted to protein-nucleic_acid_interactions metalloregulation by sobolevnrm to the group baker-group on 2007-05-25 14:12:47 as
	Selectivity of Metal Binding and Metal-Induced Stability of Escherichia coli NikR [My Copy] Biochemistry, Vol. 43, No. 31. (2004), pp. 10018-28. by S. C. Wang, A. V. Dias, S. L. Bloom, D. B. Zamble posted to protein-nucleic_acid_interactions metalloregulation by sobolevnrm to the group baker-group on 2007-05-25 14:12:47 as

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nikr	9
molecular_simulation	4
protein-nucleic_acid_interactions	4
allostery	2
bioinformatics	2
molecular_dynamics	2
pka	2
protein-ligand_interactions	2
protein_engineering	2
protein_folding	2
review	2
structure	2
quasiharmonic-models_elastic-network_gnm_nma_pca_etc	1
quasiharmonic_models	1

Group: baker-group - with tag metalloregulation [90 articles] Export

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