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abbreviation-resolution active ambig anaphora annotation atr bc1 ber bib bio biocreative biomedical bionlp bootstrapping chromatin class classification classifier clustering conditional conll corpus crf damage data ddb dictionary disambiguation dna drosophila dsb entity enzyme ercc1 fields flybase gene genia genomics geocoding global guidelines helicase hmm human iaa icl ie informationextraction joint learning lig3 machinelearning maxent med medline ml named narrative nemam new nlp pathtext pathway pattern perceptron pos ppi presentation protein rad1 rad18 rad2 random recognition relation-extraction repair review rpa rule-based sequence sequential software svm system-biology term text text-mining textmining tool uima unsupervised uv var voting xpa xpb xpc yapex yeast

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