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Group: UH - Computational Biology - with tag binding-site-prediction [6 articles]

Recent papers posted by members of the UH - Computational Biology group with tag binding-site-prediction
  • Non-additivity in protein-DNA binding.
    Bioinformatics, Vol. 21, No. 10. (15 May 2005), pp. 2254-2263.
    by RA O'Flanagan, G Paillard, R Lavery, AM Sengupta
    posted to binding-site-prediction bioinformatics svm by blobbybirdman to the group UH - Computational Biology on 2008-01-24 20:09:14 as *** along with 2 people nklee reidy
  • Assessing computational tools for the discovery of transcription factor binding sites
    Nat Biotechnol, Vol. 23, No. 1. (2005), pp. 137-44.
    by M Tompa, N Li, TL Bailey, GM Church, B De Moor, E Eskin, AV Favorov, MC Frith, Y Fu, WJ Kent, VJ Makeev, AA Mironov, WS Noble, G Pavesi, G Pesole, M Regnier, N Simonis, S Sinha, G Thijs, J van Helden, M Vandenbogaert, Z Weng, C Workman, C Ye, Z Zhu
    posted to algorithms binding-site-prediction evaluation by blobbybirdman to the group UH - Computational Biology on 2007-10-11 23:24:48 as read
  • Human-mouse genome comparisons to locate regulatory sites
    Nat Genet, Vol. 26, No. 2. (2000), pp. 225-8.
    by WW Wasserman, M Palumbo, W Thompson, JW Fickett, CE Lawrence
    posted to binding-site-prediction evolutionary-comparisons h_sapiens mouse by blobbybirdman to the group UH - Computational Biology on 2007-10-11 21:59:06 as read
  • Applied bioinformatics for the identification of regulatory elements
    Nat Rev Genet, Vol. 5, No. 4. (2004), pp. 276-87.
    by WW Wasserman, A Sandelin
    posted to binding-site-prediction bioinformatics cis-regulatory-elements review by blobbybirdman to the group UH - Computational Biology on 2007-10-11 21:55:42 as read
  • A supervised hidden Markov model framework for efficiently segmenting tiling array data in transcriptional and ChIP-chip experiments: systematically incorporating validated biological knowledge.
    Bioinformatics (12 October 2006)
    by Jiang Du, Joel S S Rozowsky, Jan O O Korbel, Zhengdong D D Zhang, Thomas E E Royce, Martin H H Schultz, Michael Snyder, Mark Gerstein
    posted to binding-site-prediction chip-chip hmm integration by blobbybirdman to the group UH - Computational Biology on 2007-10-11 14:49:26 as **** along with 7 people and 1 group xingxu miguel tuck eckart_bindewald djkt SeungjoonOh inesdesantiago Bioinformatics
  • Mapping of transcription factor binding regions in mammalian cells by ChIP: Comparison of array- and sequencing-based technologies
    Genome Res., Vol. 17, No. 6. (1 June 2007), pp. 898-909.
    by Ghia M Euskirchen, Joel S Rozowsky, Chia-Lin Wei, Wah H Lee, Zhengdong D Zhang, Stephen Hartman, Olof Emanuelsson, Viktor Stolc, Sherman Weissman, Mark B Gerstein, Yijun Ruan, Michael Snyder
    posted to binding-site-prediction chip-chip chip-seq genomics microarray by blobbybirdman to the group UH - Computational Biology on 2007-10-11 14:47:15 as **** along with 6 people and 3 groups isimpson kengg jtaylor ghattem epigenetics idonaldson Bioinformatics Plantandetc BergmanLab
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