Group: Mycology - library 726 articles Export

	Genomic Analysis of Adaptive Differentiation in Drosophila melanogaster [My Copy] Genetics, Vol. 179, No. 1. (1 May 2008), pp. 455-473. by Thomas L. Turner, Mia T. Levine, Melissa L. Eckert, David J. Begun posted to adaptation clinal drosophila by stajich to the group Mycology on 2008-05-21 04:40:09 as along with 2 people and 1 group emptyhb pradiptaray EisenLab
	Divergent adaptation promotes reproductive isolation among experimental populations of the filamentous fungus Neurospora [My Copy] BMC Evolutionary Biology, Vol. 8 (31 January 2008), 35. by Jeremy R. Dettman, James B. Anderson, Linda M. Kohn posted to adaptation experimental_evolution neurospora by stajich to the group Mycology on 2008-02-04 21:27:49 as along with 1 person dbensasson
	Intron Presence-Absence Polymorphisms in Daphnia [My Copy] Mol Biol Evol, Vol. 25, No. 10. (1 October 2008), pp. 2129-2139. by Angela R. Omilian, Douglas G. Scofield, Michael Lynch posted to intron intron_evolution intron_gain intron_loss population_genetics by stajich to the group Mycology on 2008-09-13 07:38:14 as along with 1 person bpcusack
	A novel screening method for cell wall mutants in Aspergillus niger identifies UDP-galactopyranose mutase (UgmA) as an important protein in fungal cell wall biosynthesis [My Copy] Genetics (3 February 2008), genetics.107.073148. by Robbert A. Damveld, Angelique Franken, Mark Arentshorst, et al.Peter J. Punt, Frans M. Klis, Cees A. van den Hondel, Arthur F. Ram posted to aspergillus cell_wall by stajich to the group Mycology on 2008-02-04 08:15:57 as
	Structure of a tyrosyl-tRNA synthetase splicing factor bound to a group I intron RNA [My Copy] Nature, Vol. 451, No. 7174. (3 January 2008), pp. 94-97. by Paul J. Paukstelis, Jui-Hui Chen, Elaine Chase, Alan M. Lambowitz, Barbara L. Golden posted to evolution interaction neurospora rna structure world by sharpton to the group Mycology on 2008-01-03 16:54:42 as along with 1 person stajich
	CONTRAST: a discriminative, phylogeny-free approach to multiple informant de novo gene prediction [My Copy] Genome Biology, Vol. 8 (20 December 2007), R269. by Samuel S. Gross, Chuong B. Do, Marina Sirota, Serafim Batzoglou posted to comparative_genomics gene_prediction by stajich to the group Mycology on 2007-12-23 21:48:05 as along with 4 people and 1 group talponer dakelley GustavoLacerda renatomilani EisenLab
	Bias in phylogenetic tree reconciliation methods: implications for vertebrate genome evolution [My Copy] Genome Biology, Vol. 8, No. 7. (16 July 2007), R141. by Matthew Hahn posted to duplication gene_tree phylogenetics reconciliation by stajich to the group Mycology on 2007-12-06 22:48:10 as along with 1 person bpcusack
	Significantly low level of small RNA accumulation derived from an encapsidated mycovirus with dsRNA genome. [My Copy] Virology (28 October 2009) by Misako Himeno, Kensaku Maejima, Ken Komatsu, et al.Johji Ozeki, Masayoshi Hashimoto, Satoshi Kagiwada, Yasuyuki Yamaji, Shigetou Namba posted to smallrna_paper smallrna sirna silencing mycovirus fungi by stajich to the group Mycology on 2009-11-09 05:26:41 as
	The Sir2-Sum1 Complex Represses Transcription Using Both Promoter-Specific and Long-Range Mechanisms to Regulate Cell Identity and Sexual Cycle in the Yeast Kluyveromyces lactis. [My Copy] PLoS genetics, Vol. 5, No. 11. (November 2009) by Meleah A. Hickman, Laura N. Rusche posted to yeast silencing saccharomyces duplication chromatin by stajich to the group Mycology on 2009-11-09 05:01:52 as
	Mononucleotide repeats are asymmetrically distributed in fungal genes. [My Copy] BMC genomics, Vol. 9 (11 December 2008), 596. by Mark W. van Passel, Leo H. de Graaff posted to repeats fungi evolution by stajich to the group Mycology on 2009-11-04 17:05:00 as
	Self-Recognition and Ca2+-Dependent Carbohydrate-Carbohydrate Cell Adhesion Provide Clues to the Cambrian Explosion [My Copy] Mol Biol Evol, Vol. 26, No. 11. (1 November 2009), pp. 2551-2561. by Xavier Fernandez-Busquets, Andre Kornig, Iwona Bucior, Max M. Burger, Dario Anselmetti posted to multicellular_animals multicellular evolution calcium_levels by stajich to the group Mycology on 2009-11-03 23:46:06 as
	Our Paths Might Cross: the Role of the Fungal Cell Wall Integrity Pathway in Stress Response and Cross Talk with Other Stress Response Pathways [My Copy] Eukaryotic Cell, Vol. 8, No. 11. (1 November 2009), pp. 1616-1625. by Beth B. Fuchs, Eleftherios Mylonakis posted to signaling cell_wall_components cell_surface by stajich to the group Mycology on 2009-10-30 20:23:42 as
	Stratification of co-evolving genomic groups using ranked phylogenetic profiles [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (2009), 355. by Shiri Freilich, Leon Goldovsky, Assaf Gottlieb, Eric Blanc, Sophia Tsoka, Christos Ouzounis posted to phylogenetic_profiling by stajich to the group Mycology on 2009-10-30 14:29:04 as along with 2 people CLH_1865 druvus
	Heterochromatin: A Rapidly Evolving Species Barrier [My Copy] PLoS Biol, Vol. 7, No. 10. (27 October 2009), e1000233. by Stacie E. Hughes, R. Scott Hawley posted to speciation by stajich to the group Mycology on 2009-10-27 17:57:22 as along with 3 people inesdesantiago dchughes daveGerrard
	The Bacterially Produced Metabolite Violacein Is Associated with Survival of Amphibians Infected with a Lethal Fungus [My Copy] Appl. Environ. Microbiol., Vol. 75, No. 21. (1 November 2009), pp. 6635-6638. by Matthew H. Becker, Robert M. Brucker, Christian R. Schwantes, Reid N. Harris, Kevin P. C. Minbiole posted to batrachochytrium antifungal by stajich to the group Mycology on 2009-10-27 00:27:25 as
	The relationship between the evolution of microRNA targets and the length of their UTRs [My Copy] BMC Genomics, Vol. 10, No. 1. (14 September 2009), 431. by Chao Cheng, Nitin Bhardwaj, Mark Gerstein posted to utr regulation posttranscriptional mirna methods bioinformatics by stajich to the group Mycology on 2009-10-26 01:29:13 as along with 6 people and 1 group heliopais valeriehilgers hrogers ealloza kshameer neils microRNA
	The Nuclear Protein Sge1 of Fusarium oxysporum Is Required for Parasitic Growth [My Copy] PLoS Pathog, Vol. 5, No. 10. (23 October 2009), e1000637. by Caroline B. Michielse, Ringo van Wijk, Linda Reijnen, et al.Erik M. M. Manders, Sonja Boas, Chantal Olivain, Claude Alabouvette, Martijn Rep posted to plantpathogen fusarium by stajich to the group Mycology on 2009-10-26 01:00:47 as along with 1 person bcondon
	Mammalian miRNA RISC recruits CAF1 and PABP to affect PABP-dependent deadenylation. [My Copy] Molecular cell, Vol. 35, No. 6. (24 September 2009), pp. 868-880. by Marc R. Fabian, Géraldine Mathonnet, Thomas Sundermeier, et al.Hansruedi Mathys, Jakob T. Zipprich, Yuri V. Svitkin, Fabiola Rivas, Martin Jinek, James Wohlschlegel, Jennifer A. Doudna, Chyi-Ying Y. Chen, Ann-Bin B. Shyu, John R. Yates, Gregory J. Hannon, Witold Filipowicz, Thomas F. Duchaine, Nahum Sonenberg posted to transcript regulation posttranscriptional polya mirna mammalian gene_regulation by stajich to the group Mycology on 2009-10-25 20:34:07 as along with 3 people hcoller toni_marco valeriehilgers
	Fungal Physiology - A Future Perspective. [My Copy] Microbiology (Reading, England) (22 October 2009) by Richard A. Wilson, Nicholas J. Talbot posted to review physiology fungi by stajich to the group Mycology on 2009-10-25 17:02:14 as
	Observing Meiosis in Filamentous Fungi: Sordaria and Neurospora [My Copy] Meiosis (2009), pp. 91-114. by Denise Zickler posted to methods by stajich to the group Mycology on 2009-10-25 16:28:40 as
	Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans [My Copy] Nature, Vol. 461, No. 7262. (09 September 2009), pp. 393-398. by Brian J. Haas, Sophien Kamoun, Michael C. Zody, et al.Rays H. Y. Jiang, Robert E. Handsaker, Liliana M. Cano, Manfred Grabherr, Chinnappa D. Kodira, Sylvain Raffaele, Trudy Torto-Alalibo, Tolga O. Bozkurt, Audrey M. V. Ah-Fong, Lucia Alvarado, Vicky L. Anderson, Miles R. Armstrong, Anna Avrova, Laura Baxter, Jim Beynon, Petra C. Boevink, Stephanie R. Bollmann, Jorunn I. B. Bos, Vincent Bulone, Guohong Cai, Cahid Cakir, James C. Carrington, Megan Chawner, Lucio Conti, Stefano Costanzo, Richard Ewan, Noah Fahlgren, Michael A. Fischbach, Johanna Fugelstad, Eleanor M. Gilroy, Sante Gnerre, Pamela J. Green, Laura J. Grenville-Briggs, John Griffith, Niklaus J. Grunwald, Karolyn Horn, Neil R. Horner, Chia-Hui Hu, Edgar Huitema, Dong-Hoon Jeong, Alexandra M. E. Jones, Jonathan D. G. Jones, Richard W. Jones, Elinor K. Karlsson, Sridhara G. Kunjeti, Kurt Lamour, Zhenyu Liu, LiJun Ma, Daniel MacLean, Marcus C. Chibucos, Hayes McDonald, Jessica McWalters, Harold J. G. Meijer, William Morgan, Paul F. Morris, Carol A. Munro, Keith OâNeill, Manuel Ospina-Giraldo, Andres Pinzon, Leighton Pritchard, Bernard Ramsahoye, Qinghu Ren, Silvia Restrepo, Sourav Roy, Ari Sadanandom, Alon Savidor, Sebastian Schornack, David C. Schwartz, Ulrike D. Schumann, Ben Schwessinger, Lauren Seyer, Ted Sharpe, Cristina Silvar, Jing Song, David J. Studholme, Sean Sykes, Marco Thines, Peter J. I. van de Vondervoort, Vipaporn Phuntumart, Stephan Wawra, Rob Weide, Joe Win, Carolyn Young, Shiguo Zhou, William Fry, Blake C. Meyers, Pieter van West, Jean Ristaino, Francine Govers, Paul R. J. Birch, Stephen C. Whisson, Howard S. Judelson, Chad Nusbaum posted to secretion rxlr plantpathogen phytophthora_infestans oomycete effectors crinkler by stajich to the group Mycology on 2009-10-20 10:52:12 as along with 10 people and 2 groups kiekyon diamantis bcondon ArtemPankin ppgardne jmanning2k dbk tomhebbron danmaclean rschulz Khavkin's lab Journal picks
	Origin and evolution of the Notch signalling pathway: an overview from eukaryotic genomes [My Copy] BMC Evolutionary Biology, Vol. 9, No. 1. (13 October 2009), 249. by Eve Gazave, Pascal Lapebie, Gemma Richards, et al.Frederic Brunet, Alexander Ereskovsky, Bernard Degnan, Carole Borchiellini, Michel Vervoort, Emmanuelle Renard posted to signaling notch_pathway notch metazoa by stajich to the group Mycology on 2009-10-16 11:13:56 as along with 2 people druvus grahamc
	Riboswitch detection using profile Hidden Markov Models [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (08 October 2009), 325. by Payal Singh, Pradipta Bandyopadhyay, Sudha Bhattacharya, A. Krishnamachari, Supratim Sengupta posted to rnaworld noncoding_rna noncoding hmm by stajich to the group Mycology on 2009-10-16 11:11:04 as along with 1 person reyez
	Fungal Diversity in Deep-Sea Hydrothermal Ecosystems [My Copy] Appl. Environ. Microbiol., Vol. 75, No. 20. (15 October 2009), pp. 6415-6421. by Thomas Le Calvez, Gaetan Burgaud, Stephane Mahe, Georges Barbier, Philippe Vandenkoornhuyse posted to thermophile marine fungi diversity deep-sea by stajich to the group Mycology on 2009-10-09 22:31:50 as
	New azaphilones, seco-chaetomugilins A and D, produced by a marine-fish-derived Chaetomium globosum. [My Copy] Marine drugs, Vol. 7, No. 2. (2009), pp. 249-257. by Takeshi Yamada, Yasuhide Muroga, Reiko Tanaka posted to mycotoxin marine fungi by stajich to the group Mycology on 2009-10-08 06:49:22 as
	Epigenetic and conventional regulation is distributed among activators of FLO11 allowing tuning of population-level heterogeneity in its expression. [My Copy] PLoS genetics, Vol. 5, No. 10. (2 October 2009), e1000673. by Leah M. Octavio, Kamil Gedeon, Narendra Maheshri posted to saccharomyces floculation cell_surface_interactions cell_surface by stajich to the group Mycology on 2009-10-02 17:16:39 as
	ALLPATHS 2: small genomes assembled accurately and with high continuity from short paired reads [My Copy] Genome Biology, Vol. 10, No. 10. (1 October 2009), R103. by Iain MacCallum, Dariusz Przybylski, Sante Gnerre, et al.Joshua Burton, Ilya Shlyakhter, Andreas Gnirke, Joel Malek, Kevin McKernan, Swati Ranade, Terrance Shea, Louise Williams, Sarah Young, Chad Nusbaum, David Jaffe posted to shortread methods bioinformatics assembly by stajich to the group Mycology on 2009-10-02 16:01:50 as along with 10 people djkt n00c azazello dakelley jgill GustavoLacerda ramonvidal justinhjohnson druvus neils
	The Aspergillus Genome Database, a curated comparative genomics resource for gene, protein and sequence information for the Aspergillus research community. [My Copy] Nucleic acids research (22 September 2009) by Martha B. Arnaud, Marcus C. Chibucos, Maria C. Costanzo, et al.Jonathan Crabtree, Diane O. Inglis, Adil Lotia, Joshua Orvis, Prachi Shah, Marek S. Skrzypek, Gail Binkley, Stuart R. Miyasato, Jennifer R. Wortman, Gavin Sherlock posted to genome database aspergillus by stajich to the group Mycology on 2009-09-27 22:08:20 as
	Cryptococcus shivajii sp. nov.: A Novel Basidiomycetous Yeast Isolated from Biogas Reactor. [My Copy] Current microbiology (24 September 2009) by Sreenivas R. Ravella, Stephen A. James, Christopher J. Bond, et al.Ian N. Roberts, Kathryn Cross, Andy Retter, Phil J. Hobbs posted to species cryptococcus biofuel by stajich to the group Mycology on 2009-09-27 21:47:11 as
	Comparative and functional characterization of intragenic tandem repeats in 10 Aspergillus genomes. [My Copy] Molecular biology and evolution, Vol. 26, No. 3. (1 March 2009), pp. 591-602. by John G. Gibbons, Antonis Rokas posted to repeats polymorphism cell_wall_genes cell_wall cell_surface aspergillus by stajich to the group Mycology on 2009-09-26 22:38:43 as along with 3 people operon Bio_Mike druvus
	Benchmarking next-generation transcriptome sequencing for functional and evolutionary genomics [My Copy] Mol Biol Evol (25 August 2009), msp188. by John G. Gibbons, Eric M. Janson, Chris T. Hittinger, Mark Johnston, Patrick Abbot, Antonis Rokas posted to transcription_profiling shortread nextgensequencing gene_expression by stajich to the group Mycology on 2009-09-26 22:37:40 as along with 6 people mlog kiekyon biomcgary GustavoLacerda natstreet druvus
	Coding tandem repeats generate diversity in Aspergillus fumigatus genes. [My Copy] Eukaryotic cell, Vol. 6, No. 8. (August 2007), pp. 1380-1391. by Emma Levdansky, Jacob Romano, Yona Shadkchan, et al.Haim Sharon, Kevin J. Verstrepen, Gerald R. Fink, Nir Osherov posted to repeats polymorphism cell_wall cell_surface aspergillus by stajich to the group Mycology on 2009-09-26 22:36:10 as along with 1 person druvus
	An epistatic ratchet constrains the direction of glucocorticoid receptor evolution [My Copy] Nature, Vol. 461, No. 7263. (24 September 2009), pp. 515-519. by Jamie T. Bridgham, Eric A. Ortlund, Joseph W. Thornton posted to parsimony evolution dollo by stajich to the group Mycology on 2009-09-26 22:05:42 as along with 9 people venancio merpublic docv bpcusack cmzmasek jjray zwang Annab stevanspringer
	Intragenic tandem repeats generate functional variability. [My Copy] Nature genetics, Vol. 37, No. 9. (07 September 2005), pp. 986-990. by Kevin J. Verstrepen, An Jansen, Fran Lewitter, Gerald R. Fink posted to yeast fungi cell_wall_proteins cell_wall cell_surface bioinformatics by stajich to the group Mycology on 2009-09-26 21:10:14 as along with 2 people kristallreiner druvus
	galign: A Tool for Rapid Genome Polymorphism Discovery [My Copy] PLoS ONE, Vol. 4, No. 9. (25 September 2009), e7188. by Shai Shaham posted to software polymorphism plosone_highlight methods bioinformatics by stajich to the group Mycology on 2009-09-26 17:09:37 as along with 7 people maren scmelton natstreet Benedikt_Zimmermann n00c torfinnnome druvus
	Five Questions about Microsporidia [My Copy] PLoS Pathog, Vol. 5, No. 9. (25 September 2009), e1000489. by Patrick Keeling posted to microsporidia by stajich to the group Mycology on 2009-09-25 19:25:26 as along with 2 people fungal bcondon
	Improved northern blot method for enhanced detection of small RNA [My Copy] Nat. Protocols, Vol. 3, No. 6. (05 June 2008), pp. 1077-1084. by Gurman S. Pall, Andrew J. Hamilton posted to smallrna methods by stajich to the group Mycology on 2009-09-25 19:10:37 as along with 2 people daforerog valeriehilgers
	Construction of small RNA cDNA libraries for deep sequencing [My Copy] Methods, Vol. 43, No. 2. (October 2007), pp. 110-117. by C. Lu, B. Meyers, P. Green posted to smallrna methods by stajich to the group Mycology on 2009-09-25 19:10:27 as along with 3 people natstreet guhjy SciNika
	BayesPeak: Bayesian analysis of ChIP-seq data [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (2009), 299. by Christiana Spyrou, Rory Stark, Andy Lynch, Simon Tavare posted to genomics chipseq bioinformatics by stajich to the group Mycology on 2009-09-24 06:07:33 as along with 10 people and 3 groups tonamswish dswan fenghezi inesdesantiago idonaldson polivares mkiyer druvus humburg rschulz Bioinformatics JLab BergmanLab
	PhyloPattern: regular expressions to identify complex patterns in phylogenetic trees [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (19 September 2009), 298. by Philippe Gouret, Julie Thompson, Pierre Pontarotti posted to tree_comparison phyloinformatics phylogenetics evolutionary_biology by stajich to the group Mycology on 2009-09-24 06:06:56 as along with 4 people nuin scmelton druvus rschulz
	RCMAT: a regularized covariance matrix approach to testing gene sets [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (2009), 300. by Phillip Yates, Mark Reimers posted to statistics genomics bioinformatics by stajich to the group Mycology on 2009-09-24 06:06:09 as along with 5 people dipenps rdiaz heliopais barriot neils
	Cell wall assembly in Saccharomyces cerevisiae. [My Copy] Microbiology and molecular biology reviews : MMBR, Vol. 70, No. 2. (June 2006), pp. 317-343. by Guillaume Lesage, Howard Bussey posted to yeast saccharomyces chitin cell_wall beta-glucan by stajich to the group Mycology on 2009-09-20 21:15:53 as
	An interactional network of genes involved in chitin synthesis in Saccharomyces cerevisiae [My Copy] BMC Genetics, Vol. 6, No. 1. (2005), 8. by Guillaume Lesage, Jesse Shapiro, Charles Specht, et al.Anne M. Sdicu, Patrice Menard, Shamiza Hussein, Amy Tong, Charles Boone, Howard Bussey posted to yeast saccharomyces chitin_synthase cell_wall by stajich to the group Mycology on 2009-09-20 21:15:20 as along with 1 person kiekyon
	Analysis of beta-1,3-glucan assembly in Saccharomyces cerevisiae using a synthetic interaction network and altered sensitivity to caspofungin. [My Copy] Genetics, Vol. 167, No. 1. (May 2004), pp. 35-49. by Guillaume Lesage, Anne-Marie M. Sdicu, Patrice Ménard, Jesse Shapiro, Shamiza Hussein, Howard Bussey posted to yeast saccharomyces fungi fks1 cell_wall_integrity cell_wall caspofungin by stajich to the group Mycology on 2009-09-20 21:10:33 as
	Four marine-derived fungi for bioremediation of raw textile mill effluents. [My Copy] Biodegradation (18 September 2009) by Ashutosh K. Verma, Chandralata Raghukumar, Pankaj Verma, Yogesh S. Shouche, Chandrakant G. Naik posted to marine fungi bioremediation aquatic by stajich to the group Mycology on 2009-09-20 17:51:54 as
	Cryptococcus cerealis sp. nov. a psychrophilic yeast species isolated from fermented cereals. [My Copy] Antonie van Leeuwenhoek (18 September 2009) by Volkmar Passoth, Ann-Christin C. Andersson, Matilda Olstorpe, Bart Theelen, Teun Boekhout, Johan Schnürer posted to yeast psychrophile fungi cryptococcus basidiomycota by stajich to the group Mycology on 2009-09-20 17:51:30 as
	Human miRNA Precursors with Box H/ACA snoRNA Features [My Copy] PLoS Comput Biol, Vol. 5, No. 9. (18 September 2009), e1000507. by Michelle S. Scott, Fabio Avolio, Motoharu Ono, Angus I. Lamond, Geoffrey J. Barton posted to snorna smallrna mirna human by stajich to the group Mycology on 2009-09-19 19:00:56 as along with 5 people gdb samgj al2na daforerog hrogers
	Real Lives and White Lies in the Funding of Scientific Research [My Copy] PLoS Biol, Vol. 7, No. 9. (15 September 2009), e1000197. by Peter A. Lawrence posted to no-tag by stajich to the group Mycology on 2009-09-15 19:53:17 as along with 42 people and 7 groups ahmetbakan tsjipko Zephyrus polivares ubcg08l jago Laurentjp pmcarlton nuin Yanno CulCog barry rodney dmnapolitano Caronte daveGerrard sobolevnrm cyounkin jshigh maren cisevol MurphysLab ArtemPankin ifiokoye jclau reyez lilith ngehlenborg eisdur tnhh antonkratz samjlord Torsten_Holmer ommachi rdiaz druvus Borelli pedromts renatomilani chriswillmott dullhunk ppgardne JLab Convention on Knowledge Commons ePortfolio McCammon BergmanLab Khavkin's lab Journal picks
	Silent Springs: Why Are All the Frogs "Croaking"? [My Copy] PLoS Biol, Vol. 7, No. 9. (15 September 2009), e1000198. by Matthew C. Fisher posted to no-tag by stajich to the group Mycology on 2009-09-15 19:49:20 as along with 2 people and 3 groups HEIRS rdiaz HEIRS Environmental Ecology and related health hazards HEIRS Adaptive Biology, Ecology and Evolution HEIRS - Environmental Illness Research
	Nonlinear Dynamics of Nonsynonymous (dN) and Synonymous (dS) Substitution Rates Affects Inference of Selection [My Copy] Genome Biol Evol, Vol. 2009, No. 0. (4 September 2009), pp. 308-319. by Jochen B. W. Wolf, Axel Kunstner, Kiwoong Nam, Mattias Jakobsson, Hans Ellegren posted to variation selection positive genomics comparative by sharpton to the group Mycology on 2009-09-14 18:27:10 as along with 5 people and 2 groups avilella operon stajich gwallau gjuggler Ensembl Compara citations iSEEM

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fungi	160
evolution	67
methods	60
aspergillus	55
bioinformatics	51
genome	47
cell_wall	38
yeast	38
saccharomyces	37
neurospora	36
phylogenetics	34
mirna	29
smallrna	27
basidiomycota	26
molecular_evolution	26
noncoding_rna	25
comparative_genomics	23
development	22
drosophila	22
gene_expression	22
nextgensequencing	22
cryptococcus	20
pathogen	20
phylogeny	19
sequencing	19
solexa	19
genome_evolution	18
population_genomics	18
cell_surface	17
population_genetics	17
annotation	16
filamentous	16
multicellular	16
phylogenomics	16
speciation	16
coccipaper	15
genome_paper	15
sexual_development	15
computational_biology	13
duplication	13
intron	13
metazoa	13
assembly	12
bacteria	12
intron_evolution	12
plant	12
rnai	12
genomics	11
meiosis	11
plantpathogen	11
shortread	11
splicing	11
antifungal	10
coccidioides	10
mating_genes	10
pombe	10
positive_selection	10
regulation	10
selection	10
virus	10
chytrid	9
gene	9
gene_duplication	9
genome_annotation	9
human	9
rna_silencing	9
alignment	8
alternative_splicing	8
ascomycota	8
database	8
fungal	8
gene_family	8
gene_tree	8
horizontal_gene_transfer	8
mating_type	8
mushroom	8
synteny	8
transcription	8
batrachochytrium	7
beta-glucan	7
cellulose_synthase	7
halophile	7
halophilic	7
light_response	7
marine	7
oomycete	7
recombination	7
repeats	7
rna	7
selection_test	7
silencing	7
smallrna_paper	7
snp	7
zygomycota	7
caenorhabditis	6
candida	6
chipseq	6
coprinus	6
ecology	6
evodevo	6
gene_prediction	6
gene_regulation	6
hydrophobin	6
hypersaline	6
mycorrhizal	6
plants	6
resequencing	6
spore	6
toxin	6
transcription_factor	6
adaptation	5
binding_site	5
codon_model	5
comparative	5
environmental_microbiology	5
eukarytoa	5
meiotic_silencing	5
metagenomics	5
metazoan	5
microsporidia	5
mutation_rate	5
noncoding	5
polymorphism	5
posttranscriptional	5
prediction	5
rhizopus	5
rnaseq	5
secondary_metabolite	5
sex_chromosome	5
signaling	5
stress_response	5
ustilago	5
virulence	5
virulence_factor	5
asexual_development	4
chitin	4
codon_bias	4
cryptic_species	4
dna	4
dsrna	4
eukaryota	4
gene_finding	4
glucan	4
infectious_disease	4
intron_gain	4
intron_loss	4
mapping	4
microarray	4
moniliophthora	4
morphology	4
msud	4
mycovirus	4
p450	4
paml	4
penicillium	4
phylogenetic_marker_selection	4
protein	4
protein_evolution	4
psychrophile	4
review	4
rip	4
schizophyllum	4
sequence_analysis	4
snorna	4
statistics	4
sugar	4
systematics	4
transcriptional_regulation	4
transposable_elements	4
transposon	4
tree	4
whole_genome	4
454	3
adhesion	3
amanita	3
animal	3
arabidopsis	3
biogenesis	3
cellulase	3
centromere	3
chytridgenomepaper	3
cis-regulatory	3
copy_number_variation	3
crystalstructure	3
dicer	3
diversity	3
domestication	3
enzyme	3
est	3
flagella	3
frog	3
fungus	3
fusarium	3
genotype	3
hyphal_growth	3
infection	3
microbotryum	3
motif	3
mrna	3
nematode	3
neurospora_tetrasperma	3
nmd	3
nuclear_export	3
orthology	3
phanerochaete_chrysosporium	3
pheremone	3
photoreceptor	3
phytophthora	3
plant-microbe	3
proteomics	3
rdna	3
resistance	3
rna_gene	3
secreted	3
septin	3
sirna	3
smut	3
software	3
soil	3
symbiosis	3
thermophile	3
transcript	3
transporter	3
trichoderma	3
variation	3
algae	2
algorithm	2
anopheles	2
ant	2
antisense_transcription	2
apicomplexa	2
aquatic	2
argonaute	2
ascosphaera	2
ascospore	2
automation	2
bioremediation	2
biosynthesis	2
blastomyces	2
blogging	2
browser	2
cacao	2
cellulose	2
cell_wall_integrity	2
centrosome	2
character_evolution	2
chlamydomonas	2
circadian	2
combiners	2
comparison	2
complexity	2
conidial	2
cooperation	2
defense	2
dictyostelium	2
disease	2
divergence_time	2
dothideomycete	2
drug_resistance	2
ectomycorrhizal	2
endophyte	2
euascomycte	2
evolutionary_theory	2
expression	2
extremophile	2
fks1	2
floculation	2
folding	2
fractal	2
functional_prediction	2
gene_silencing	2
glucanase	2
growth	2
heterokaryon	2
het_loci	2
histoplasma	2
honeybee	2
hyphal	2
illumina	2
imaging	2
infrastructure	2
iron	2
its_sequence	2
laccaria	2
linkage	2
magnaporthe	2
maize	2
mating_systems	2
microbial	2
microscopy	2
module	2
mosquito	2
moss	2
mucor	2
mycelia	2
mycotoxin	2
natural_selection	2
neutral	2
news	2
notch	2
nuclear	2
opisthokont	2
paralogs	2
penicillin	2
phenotypic	2
photosynthesis	2
phycomyces	2
phylogenetic_profiling	2
phylogeography	2
pirna	2
podospora	2
population	2
protein_localization	2
protist	2
puccinia	2
qtl	2
receptor	2
reconstruction	2
ribosomal	2
rnasep	2
rnaworld	2
secretion	2
secretory	2
simulation	2
species_tree	2
structure	2
supertree	2
telomerase	2
translational_control	2
treeoflife	2
visualization	2
wheat	2
witchesbroom	2
worm	2
12flies	1
5	1
5prime	1
5s	1
aedes	1
aeriel_hyphae	1
agrobacterium	1
airborne	1
allelefreq	1
alpha_amylase	1
alpha-glucosidase	1
amphibian	1
amplification	1
analysis	1
animal_evolution	1
antagonistic	1
anthocyanin	1
anthrax	1
apicomplexia	1
apoptosis	1
arbuscular	1
archea	1
armillaria	1
array	1
ashbya	1
association_study	1
autolysis	1
azole	1
baisidiomycota	1
bait	1
balancing_selection	1
barcode	1
bdpearl	1
biodiversity	1
biofilm	1
biofuel	1
biogeography	1
biotroph	1
birthdeath	1
boletales	1
briggsae	1
bwa	1
c4	1
calcium_levels	1
cancer	1
canine	1
carbon_footprint	1
carnivorous	1
caspofungin	1
ccd	1
celegans	1
cell_surface_interactions	1
cellulose_binding_domain	1
cellulose_degradation	1
cell_wall_components	1
cell_wall_genes	1
cell_wall_proteins	1
cgh	1
chemical_genomics	1
chemotaxis	1
chitin_synthase	1
chitosan	1
chocolate	1
chordate	1
chromatin	1
chromosome	1
cilia	1
citrus	1
cladosporium	1
classification	1
claviceps	1
climate_change	1
clinal	1
clinical	1
clock	1
coal	1
coalescent	1
coccipopgen	1
cocoa	1
coelomata	1
coevolution	1
co-evolution	1
cold	1
colony	1
colony_collapse	1
condida	1
conservation	1
coral	1
cospeciation	1
coverage	1
cpg	1
crinkler	1
cryphonectria	1
cytochrome	1
databases	1
data_mining	1
dating	1
deep-sea	1
deleterious	1
dermatophytes	1
design	1
diesel	1
dimorphism	1
dispersal	1
divergence	1
divergent_genes	1
dollo	1
ecdysozoa	1
ecological_speciation	1
editorial	1
effectors	1
emerging	1
endosymbiont	1
engineering	1
enrichment	1
ensembl	1
ensemblcompara	1
enviroment	1
environment	1
epistasis	1
eqtl	1
ergosterol	1
ethnobotany	1
even-skipped	1
evolutionary_biology	1
excavata	1
expansion	1
experimental_evolution	1
export	1
farming	1
fitness	1
fluconazole	1
fly	1
fruitingbody	1
fuel	1
funding	1
fungicide	1
gene_network	1
gene_ontology	1
gene_structure	1
genetic_incompatibility	1
genetics	1
genetic_screen	1
genome_duplication	1
gh6	1
gpcr	1
g-proteins	1
graphics	1
gui	1
h1n1	1
h3k9	1
heat_shock	1
herbarium	1
heterobasidion	1
heterochromatin	1
heterotachy	1
heterozygosity	1
histone	1
hmm	1
homoplasy	1
hortaea	1
hot_spring	1
htg	1
hybridization	1
hydra	1
hydrogenase	1
hyphal_fusion	1
imprinting	1
incompatibility	1
index_of_association	1
influenza	1
informatics	1
insect	1
interaction	1
interfaction	1
intron_sliding	1
invasive	1
invasive_species	1
isolation	1
jakobid	1
journal	1
keritinophilic	1
knock-out	1
labeling	1
laea	1
largest_organism	1
leishmania	1
library	1
lichen	1
lineage-specific	1
live_imaging	1
ltr	1
luciferase	1
macaque	1
malaria	1
mammal	1
mammalian	1
mass_spec	1
mcmc	1
medical	1
medical_mycology	1
melanin	1
metalloproteinase	1
method	1
microbiome	1
missing_words	1
mitochondria	1
model_system	1
modernsynthesis	1
mouse	1
multicellular_animals	1
multiple_sequence_alignment	1
mutagenesis	1
mutalism	1
mycology	1
myosin	1
ncrna	1
necrotroph	1
network	1
niche	1
nitrogen	1
non-self-recognition	1
normalization	1
notch_pathway	1
nrps	1
nucleosome	1
nucleus	1
ocean	1
onygenales	1
opsin	1
orphan	1
paracoccidioides	1
parallel	1
parasexual	1
parser	1
parsimony	1
pattern	1
peroxisomes	1
phagocytosis	1
phanerochaete	1
philosophyofscience	1
phototaxis	1
phylocode	1
phylogenetic	1
phylogenomic	1
phyloinformatics	1
physcomitrella	1
physiology	1
phytochrome	1
phytophthora_infestans	1
piwi	1
pks	1
plant_cell_wall	1
plosone_highlight	1
pneumocystis	1
policy	1
polya	1
populus	1
positive	1
positive_selecion	1
primate	1
primer_design	1
profiling	1
prokaryotes	1
promotor	1
proteases	1
protein_interactions	1
protoplast	1
publication	1
publishing	1
quantitative_genetics	1
r	1
rad50	1
randomforest	1
rangequery	1
rat	1
rearrangement	1
reconciliation	1
regulatory_evolution	1
report	1
reproduction	1
retrotransposon	1
ribosomes	1
riboswitch	1
rna_binding	1
rodent	1
rotting	1
rrna	1
rxlr	1
same_sex_mating	1
science	1
scienceblog	1
screen	1
scripts	1
segregation	1
selfing	1
senescence	1
septalplug	1
sequence	1
serotype	1
sesquiterpene	1
sex	1
sexual_recombination	1
sexual_selection	1
simluation	1
site	1
smuth	1
sordaria	1
species	1
species-specific	1
spindlepolebody	1
sponge	1
sporulation	1
sr	1
ssr	1
stagonospora	1
stonewashed	1
strain	1
substrate	1
subtractive_hybridization	1
sugar_transporter	1
tag	1
target	1
taxonomy	1
tbrucei	1
tetraspannin	1
theory	1
transcription_profiling	1
transposase	1
tree_comparison	1
trna	1
trypanosome	1
tyrosine	1
undergraduate_research	1
utr	1
validation	1
vegetative_compatibility	1
vertebrate	1
virulence_factory	1
wcc	1
wga	1
wiki	1
word_frequency	1
world	1
woroninbody	1
xml	1
yellowstone	1
zoospore	1

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