Group: Mycology - with tag molecular_evolution [26 articles] Export

Recent papers posted by members of the Mycology group with tag molecular_evolution

	Ecological Nitrogen Limitation Shapes the DNA Composition of Plant Genomes [My Copy] Molecular Biology and Evolution, Vol. 26, No. 5., pp. 953-956. by Claudia Acquisti, James J. Elser, Sudhir Kumar posted to genomics molecular_evolution nitrogen plant by stajich to the group Mycology on 2009-05-06 23:18:11 as along with 2 people GustavoLacerda robfsouza
	Inferring molecular function: contributions from functional linkages. [My Copy] Trends in genetics : TIG (23 October 2008) by Arturo Medrano-Soto, Debnath Pal, David Eisenberg posted to computational_biology functional_prediction genomics molecular_evolution by stajich to the group Mycology on 2009-02-19 00:17:34 as along with 2 people and 1 group psique i000 MuraLab
	An investigation of the statistical power of neutrality tests based on comparative and population genetic data [My Copy] Mol Biol Evol (14 October 2008), msn231. by Weiwei Zhai, Rasmus Nielsen, Montgomery Slatkin posted to molecular_evolution neutral population_genetics selection_test by stajich to the group Mycology on 2009-01-14 08:51:46 as along with 6 people ilyashl jmeppley druvus stevanspringer renewang djkt
	"REVERSE ECOLOGY" AND THE POWER OF POPULATION GENOMICS [My Copy] Evolution, Vol. 62, No. 12. (2008), pp. 2984-2994. by Yong F. Li, James C. Costello, Alisha K. Holloway, Matthew W. Hahn posted to coccipopgen molecular_evolution population_genomics positive_selection selection selection_test by stajich to the group Mycology on 2008-12-29 18:27:20 as along with 6 people fungal jasontsai maren natstreet druvus jbsaltz
	The Population Genetics of dN/dS [My Copy] PLoS Genet, Vol. 4, No. 12. (12 December 2008), e1000304. by Sergey Kryazhimskiy, Joshua B. Plotkin posted to molecular_evolution natural_selection population_genetics population_genomics positive_selection selection selection_test by stajich to the group Mycology on 2008-12-17 19:14:14 as along with 17 people and 1 group operon gjuggler seb1 dposada gwallau ilyashl skembel proulx zwang nuin bpcusack Zephyrus balicea renewang michaelbarton druvus djkt R.E.A.D
	An Analysis of Structural Influences on Selection in RNA Genes [My Copy] Mol Biol Evol, Vol. 26, No. 1. (1 January 2009), pp. 209-216. by Naila K. Mimouni, Rune B. Lyngso, Sam Griffiths-Jones, Jotun Hein posted to computational_biology molecular_evolution noncoding_rna selection by stajich to the group Mycology on 2008-12-15 04:41:09 as along with 2 people druvus djkt
	A Novel Gene Family Controls Species-Specific Morphological Traits in Hydra [My Copy] PLoS Biology, Vol. 6, No. 11. (1 November 2008), e278. by Konstantin Khalturin, Friederike Anton-Erxleben, Sylvia Sassmann, Jörg Wittlieb, Georg Hemmrich, Thomas C. Bosch posted to evolution gene gene_expression hydra lineage-specific molecular_evolution morphology species-specific subtractive_hybridization by stajich to the group Mycology on 2008-11-18 23:05:44 as along with 3 people biomcgary grahamc djkt
	Uncorrected nucleotide bias in mtDNA can mimic the effects of positive Darwinian selection. [My Copy] Molecular biology and evolution (8 October 2008) by Mihai Albu, Xiang Jia J. Min, Donal Hickey, Brian Golding posted to molecular_evolution positive_selection by stajich to the group Mycology on 2008-11-18 18:27:39 as along with 3 people GustavoLacerda djkt nuin
	A Simple Formula for Obtaining Markedly Improved Mutation Rate Estimates [My Copy] Genetics (1 October 2008), genetics.108.091777. by Philip J. Gerrish posted to molecular_evolution mutation_rate by stajich to the group Mycology on 2008-10-02 06:33:38 as
	The infinite sites model of genome evolution [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 38. (23 September 2008), pp. 14254-14261. by Jian Ma, Aakrosh Ratan, Brian J. Raney, Bernard B. Suh, Webb Miller, David Haussler posted to bioinformatics computational_biology genome_evolution genomics molecular_evolution population_genomics by stajich to the group Mycology on 2008-09-24 19:53:28 as along with 8 people sharpton Thaverkamp AaronDarling ilyashl druvus operon inesdesantiago stringertheory
	Accelerated evolutionary rates in tropical and oceanic parmelioid lichens (Ascomycota) [My Copy] BMC Evolutionary Biology, Vol. 8 (22 September 2008), 257. by Thorsten H. Lumbsch, Andrew L. Hipp, Pradeep K. Divakar, Oscar Blanco, Ana Crespo posted to ascomycota fungi lichen molecular_evolution phylogenetics sequence_analysis by stajich to the group Mycology on 2008-09-23 19:10:00 as
	Current topics in genome evolution: Molecular mechanisms of new gene formation [My Copy] Cellular and Molecular Life Sciences (CMLS), Vol. 64, No. 5. (14 March 2007), pp. 542-554. by D. Babushok, E. Ostertag, H. Kazazian posted to alternative_splicing duplication gene genome_evolution molecular_evolution by stajich to the group Mycology on 2008-09-03 19:26:42 as along with 2 people GustavoLacerda jandot
	How Well Does the HoT Score Reflect Sequence Alignment Accuracy? [My Copy] Mol Biol Evol, Vol. 25, No. 8. (1 August 2008), pp. 1576-1580. by Barry G. Hall posted to alignment bioinformatics methods molecular_evolution statistics by stajich to the group Mycology on 2008-07-15 16:36:43 as along with 6 people druvus treangen nuin gjuggler bpcusack cabbagesofdoom
	An improved general amino acid replacement matrix. [My Copy] Molecular biology and evolution, Vol. 25, No. 7. (1 July 2008), pp. 1307-1320. by Si Quang Q. Le, Olivier Gascuel posted to bioinformatics evolution methods molecular_evolution phylogenetics protein_evolution by stajich to the group Mycology on 2008-06-14 07:08:01 as along with 5 people BioNica lizbiogen druvus friendpine dmp
	A Maximum Likelihood Method for Detecting Directional Evolution in Protein Sequences and its Application to Influenza A Virus. [My Copy] Molecular biology and evolution (29 May 2008) by Sergei L L. Kosakovsky Pond, Art F Y F. Poon, Andrew J J. Leigh Brown, Simon D W D. Frost posted to molecular_evolution positive_selection by stajich to the group Mycology on 2008-06-01 13:47:45 as along with 3 people pradiptaray zwang phoenixzxl
	Revisiting the Saccharomyces cerevisiae predicted ORFeome. [My Copy] Genome research, Vol. 18, No. 8. (23 August 2008), pp. 1294-1303. by Qian-Ru R. Li, Anne-Ruxandra R. Carvunis, Haiyuan Yu, et al.Jing-Dong D. Han, Quan Zhong, Nicolas Simonis, Stanley Tam, Tong Hao, Niels J. Klitgord, Denis Dupuy, Danny Mou, Ilan Wapinski, Aviv Regev, David E. Hill, Michael E. Cusick, Marc Vidal posted to fungi genome_annotation molecular_evolution saccharomyces yeast by stajich to the group Mycology on 2008-05-28 05:57:18 as along with 6 people biomcgary kiekyon dbensasson nklee biehl guhjy
	Overdispersion of the molecular clock varies between yeast, Drosophila and mammals [My Copy] Genetics (27 May 2008), genetics.108.089185. by Trevor Bedford, Ilan Wapinski, Daniel L. Hartl posted to molecular_evolution by stajich to the group Mycology on 2008-05-28 05:55:06 as along with 3 people gjuggler djkt aprasad
	Evidence against the energetic cost hypothesis for the short introns in highly expressed genes [My Copy] BMC Evolutionary Biology, Vol. 8 (20 May 2008), 154. by Yi-Fei Huang, Deng-Ke Niu posted to intron intron_evolution molecular_evolution by stajich to the group Mycology on 2008-05-27 16:19:14 as along with 3 people and 1 group GustavoLacerda michaelbarton cisevol BergmanLab
	The McDonald-Kreitman Test and Slightly Deleterious Mutations [My Copy] Mol Biol Evol, Vol. 25, No. 6. (1 June 2008), pp. 1007-1015. by Jane Charlesworth, Adam Eyre-Walker posted to adaptation methods molecular_evolution population_genetics population_genomics by stajich to the group Mycology on 2008-05-10 01:44:49 as along with 9 people Garamonfok operon emptyhb druvus cabbagesofdoom gjuggler Stew stevanspringer bpcusack
	PAML: a program package for phylogenetic analysis by maximum likelihood. [My Copy] Computer applications in the biosciences : CABIOS, Vol. 13, No. 5. (October 1997), pp. 555-556. by Z. Yang posted to coccipaper codon_model methods molecular_evolution paml phylogenetics by stajich to the group Mycology on 2008-04-19 21:34:23 as along with 15 people and 2 groups seb1 thegoose2 alexeid druvus jmjimenez bjorns chrn chad_davis indigoviolet penka BioNica pv usagi-kirin tharris skumagai EisenLab Nie
	Codon-substitution models for detecting molecular adaptation at individual sites along specific lineages. [My Copy] Mol Biol Evol, Vol. 19, No. 6. (June 2002), pp. 908-917. by Z. Yang, R. Nielsen posted to coccipaper codon_model molecular_evolution selection selection_test by stajich to the group Mycology on 2008-04-19 21:31:03 as along with 5 people and 1 group clearbluespring skembel stevanspringer operon Garamonfok FAB-lab
	Bayes Empirical Bayes Inference of Amino Acid Sites Under Positive Selection [My Copy] Molecular Biology and Evolution, Vol. 22, No. 4. (April 2005), pp. 1107-1118. by Ziheng Yang, Wendy S. Wong, Rasmus Nielsen posted to codon_model molecular_evolution paml positive_selecion selection selection_test by stajich to the group Mycology on 2008-04-19 21:29:42 as along with 6 people rabu BioNica Natasha Garamonfok skumagai CharlesM
	PAML 4: phylogenetic analysis by maximum likelihood. [My Copy] Molecular biology and evolution, Vol. 24, No. 8. (1 August 2007), pp. 1586-1591. by Ziheng Yang posted to codon_model molecular_evolution paml selection selection_test by stajich to the group Mycology on 2008-04-19 21:29:03 as along with 13 people ckenaley biomcgary michaelbarton dquest druvus operon akifumi hdopazo BioNica ryanraaum RamuAnandakrishnan CharlesM Ema
	Mutation-Selection Models of Codon Substitution and Their Use to Estimate Selective Strengths on Codon Usage. [My Copy] Mol Biol Evol (3 January 2008) by Ziheng Yang, Rasmus Nielsen posted to codon_model molecular_evolution paml selection selection_test by stajich to the group Mycology on 2008-04-19 21:28:48 as along with 4 people operon BioNica cjeans gjuggler
	Natural selection of protein structural and functional properties: a SNP perspective [My Copy] Genome Biology, Vol. 9, No. 4. (2008) by Jinfeng Liu, Yan Zhang, Xingye Lei, Zemin Zhang posted to molecular_evolution natural_selection polymorphism snp by stajich to the group Mycology on 2008-04-09 00:01:18 as along with 4 people operon fernan ramensky dandaman
	THE MODERN MOLECULAR CLOCK [My Copy] Nat Rev Genet, Vol. 4, No. 3. (March 2003), pp. 216-224. by Lindell Bromham, David Penny posted to molecular_evolution by stajich to the group Mycology on 2007-12-14 22:09:41 as along with 2 people lizbiogen tmmurali

Note: You may cite this page as: http://www.citeulike.org/group/3565/tag/molecular_evolution

selection	17
selection_test	15
population_genetics	13
positive_selection	13
evolution	12
phylogenetics	12
codon_model	10
drosophila	10
genomics	10
methods	9
paml	9
population_genomics	8
bioinformatics	6
coccipaper	6
computational_biology	6
genome_evolution	5
natural_selection	5
review	5
fungi	4
gene	4
gene_duplication	4
model	4
mutation_rate	4
transcription	4
evolvability	3
molecular_clock	3
neutral	3
snp	3
statistics	3
yeast	3
adaptation	2
alignment	2
alternative_splicing	2
ascomycota	2
cis_regulatory_variation	2
coccipopgen	2
detecting_positive_selection	2
duplication	2
functional_prediction	2
gene_cluster	2
gene_conversion	2
gene_expression	2
genome_annotation	2
genome_architecture	2
hiv	2
host-parasite	2
hydra	2
intron	2
intron_evolution	2
lichen	2
lineage-specific	2
morphology	2
mutation	2
nitrogen	2
noncoding_rna	2
origin_of_replication	2
phenotypic_evolution	2
plant	2
polymorphism	2
positive_selecion	2
protein_evolution	2
rate_of_evolution	2
recombination	2
robustness	2
saccharomyces	2
sequence_analysis	2
sex_chromosomes	2
sexual_selection	2
share	2
species-specific	2
subtractive_hybridization	2
x_chromosome	2
adaptive	1
adaptive_evolution	1
apoptosis	1
biased_mutation	1
ceacam	1
codon	1
crowding	1
drug_resistance	1
elevation	1
f1000	1
hky85	1
hzygo	1
immune_system	1
microarray	1
modularity_hierachy	1
molecular	1
mutations	1
mytilus	1
pseudoautosomal	1
rates	1
read	1
rna_virus	1
ry_coding	1
sex_comb_ref	1
spp120	1
stability	1
tooth_decay	1
usp9y	1

Group: Mycology - with tag molecular_evolution [26 articles] Export

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