Register | Log in | FAQ      [?] 
Recent | Recommended | Search | Authors | Tags | Export

Group: T_lab - library [380 articles]

Recent papers posted by members of the T_lab group
  • BioProber: Software System for Biomedical Relation Discovery from PubMed
    Engineering in Medicine and Biology Society, 2006. EMBS '06. 28th Annual International Conference of the IEEE (2006), pp. 5779-5782.
    by Hyunchul Jang, Jaesoo Lim, Joon-Ho Lim, Soo-Jun Park, Kyu-Chul Lee
    posted to nlp by yas to the group T_lab on 2007-09-19 06:03:08 as ** along with 1 person Barend
  • BIOSMILE: A semantic role labeling system for biomedical verbs using a maximum-entropy model with automatically generated template features
    BMC Bioinformatics, Vol. 8 (01 September 2007), 325.
    by Richard T Tsai, Wen-Chi Chou, Ying-Shan Su, Yu-Chun Lin, Cheng-Lung Sung, Hong-Jie Dai, Irene T Yeh, Wei Ku, Ting-Yi Sung, Wen-Lian Hsu
    posted to nlp by yas to the group T_lab on 2007-09-11 09:48:52 as ** along with 3 people jyuh mircea Barend
  • Web services in the life sciences
    Drug Discovery Today, Vol. 10, No. 12. (15 June 2005), pp. 865-871.
    by Vasa Curcin, Moustafa Ghanem, Yike Guo
    posted to web-service text-mining by yas to the group T_lab on 2007-08-23 08:28:58 as ** along with 7 people and 1 group dullhunk LeightonP rdhyee nicklynch moborg fisherp Barend Blog_and_Wiki_Research
  • PubMed vs. HighWire Press: A head-to-head comparison of two medical literature search engines.
    Comput Biol Med, Vol. 37, No. 9. (September 2007), pp. 1252-1258.
    by TE Vanhecke, MA Barnes, J Zimmerman, S Shoichet
    posted to information-retrieval by yas to the group T_lab on 2007-08-22 14:38:20 as ** along with 2 people dullhunk Gaetan
  • Clustering Microarray-Derived Gene Lists through Implicit Literature Relationships.
    Bioinformatics (30 May 2007)
    by Mark F F Burkart, Jonathan D D Wren, Jason I I Herschkowitz, Charles M M Perou, Harold R R Garner
    posted to microarray literature-based-discovery by yas to the group T_lab on 2007-08-15 15:23:38 as ** along with 5 people jyuh jfr dullhunk ghattem Barend
  • OReFiL: an online resource finder for life sciences
    BMC Bioinformatics, Vol. 8 (06 August 2007), 287.
    by Yasunori Yamamoto, Toshihisa Takagi
    posted to online-resource database by yas to the group T_lab on 2007-08-06 17:26:25 as ** along with 3 people jyuh hpiwowar Gaetan
  • A domain-based approach to predict protein-protein interactions
    BMC Bioinformatics, Vol. 8 (13 June 2007), 199.
    by Mudita Singhal, Haluk Resat
    posted to protein-protein-interactions by yas to the group T_lab on 2007-07-29 08:49:38 as ** along with 3 people and 1 group carlk grahamc phoenixzxl ParkinsonLab_at_MaRS
  • Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls
    Nature, Vol. 447, No. 7145. (7 June 2007), pp. 661-678.
    posted to genome biomedical by yas to the group T_lab on 2007-07-29 06:15:33 as ** along with 20 people and 2 groups balicea wenhui ramensky raiyar jyuh jfr hpiwowar larios vplagnol frohike qmwwallace joepickrell massivemayhem Garamonfok PredictER hms jo_davies psique caseybrown mcgannd parkinson's disease references Bioinformatics
  • A quantitative model for linking two disparate sets of articles in MEDLINE
    Bioinformatics (26 April 2007), btm161.
    by Vetle I Torvik, Neil R Smalheiser
    posted to literature-based-discovery by yas to the group T_lab on 2007-07-24 07:45:14 as ** along with 4 people Enro jyuh dullhunk florianleitner
  • Improved scoring of functional groups from gene expression data by decorrelating GO graph structure
    Bioinformatics, Vol. 22, No. 13. (1 July 2006), pp. 1600-1607.
    by Alexa, Adrian, Rahnenfuhrer, Jorg, Lengauer, Thomas
    posted to ontology microarray by yas to the group T_lab on 2007-07-23 10:03:05 as ** along with 3 people and 1 group marck sgoetz ealloza BioinfoCIPF
  • Text-derived concept profiles support assessment of DNA microarray data for acute myeloid leukemia and for androgen receptor stimulation
    BMC Bioinformatics, Vol. 8 (18 January 2007), 14.
    by Rob Jelier, Guido Jenster, Lambert CJ Dorssers, Bas J Wouters, Peter JM Hendriksen, Barend Mons, Ruud Delwel, Jan A Kors
    posted to text-mining microarray by yas to the group T_lab on 2007-07-23 08:03:36 as ** along with 4 people jfr hpiwowar fisherp Barend
  • Gene name identification and normalization using a model organism database
    J. of Biomedical Informatics, Vol. 37, No. 6. (December 2004), pp. 396-410.
    by Alexander A Morgan, Lynette Hirschman, Marc Colosimo, Alexander S Yeh, Jeff B Colombe
    posted to ner by yas to the group T_lab on 2007-07-20 12:37:31 as ** along with 4 people and 1 group helliontroy bhaddow johnkork vlachmore biomedical-nlp
  • Evaluation of BioCreAtIvE assessment of task 2.
    BMC Bioinformatics, Vol. 6 Suppl 1 (2005)
    by C Blaschke, EA Leon, M Krallinger, A Valencia
    posted to information-extraction by yas to the group T_lab on 2007-07-20 12:33:37 as ** along with 3 people and 1 group yggdrasil helliontroy zlu biomedical-nlp
  • BioCreAtIvE task 1A: gene mention finding evaluation.
    BMC Bioinformatics, Vol. 6 Suppl 1 (2005)
    by A Yeh, A Morgan, M Colosimo, L Hirschman
    posted to information-extraction by yas to the group T_lab on 2007-07-20 12:29:10 as ** along with 4 people and 1 group caporaso helliontroy zlu johnkork biomedical-nlp
  • Data preparation and interannotator agreement: BioCreAtIvE task 1B.
    BMC Bioinformatics, Vol. 6 Suppl 1 (2005)
    by ME Colosimo, AA Morgan, AS Yeh, JB Colombe, L Hirschman
    posted to information-extraction by yas to the group T_lab on 2007-07-20 12:28:27 as ** along with 4 people and 1 group blackbart helliontroy zlu vlachmore biomedical-nlp
  • Overview of BioCreAtIvE task 1B: normalized gene lists.
    BMC Bioinformatics, Vol. 6 Suppl 1 (2005)
    by L Hirschman, M Colosimo, A Morgan, A Yeh
    posted to information-extraction by yas to the group T_lab on 2007-07-20 12:27:19 as ** along with 6 people and 1 group satre TheresaNiederberger helliontroy zlu wbaumgar vlachmore biomedical-nlp
  • Overview of BioCreAtIvE: critical assessment of information extraction for biology.
    BMC Bioinformatics, Vol. 6 Suppl 1 (2005)
    by L Hirschman, A Yeh, C Blaschke, A Valencia
    posted to information-extraction by yas to the group T_lab on 2007-07-20 12:25:50 as ** along with 7 people and 1 group satre yggdrasil helliontroy bhaddow johnkork leechuck vlachmore biomedical-nlp
  • Personalized ranking: a contextual ranking approach
    (2007), pp. 506-510.
    by Gae-Won You, Seung-Won Hwang
    posted to information-retrieval context-based by yas to the group T_lab on 2007-07-12 03:53:38 as ** along with 3 people ctl ianturton diogomartins
  • uBioRSS: Tracking Taxonomic Literature Using RSS.
    Bioinformatics (28 March 2007)
    by Patrick R R Leary, David P P Remsen, Catherine N N Norton, David J J Patterson, Indra Neil N Sarkar
    posted to taxonomy software by yas to the group T_lab on 2007-06-21 13:16:23 as ** along with 3 people and 3 groups BragilMassoud jyuh kehan biodiversity_conservation Bioinformatics GrassBase
  • LinkHub: a Semantic Web system that facilitates cross-database queries and information retrieval in proteomics.
    BMC Bioinformatics, Vol. 8 Suppl 3 (2007)
    by AK Smith, KH Cheung, KY Yip, M Schultz, MK Gerstein
    posted to semantic-web database by yas to the group T_lab on 2007-06-07 04:15:22 as ** along with 8 people dansullivanblk jyuh wnpx dullhunk hpiwowar jmuhlich pablomendes Simplicity
  • Unavailability of online supplementary scientific information from articles published in major journals.
    FASEB J, Vol. 19, No. 14. (December 2005), pp. 1943-1944.
    by E Evangelou, TA Trikalinos, JP Ioannidis
    posted to database comments by yas to the group T_lab on 2007-05-26 07:53:22 as ** along with 2 people Enro hpiwowar
  • Discovering functional linkages and uncharacterized cellular pathways using phylogenetic profile comparisons: a comprehensive assessment
    BMC Bioinformatics, Vol. 8 (23 May 2007), 173.
    by Raja Jothi, Teresa M Przytycka, L Aravind
    posted to protein-function-prediction phylogenetic by yas to the group T_lab on 2007-05-24 18:50:56 as **
  • Publishing perishing? Towards tomorrow's information architecture
    BMC Bioinformatics, Vol. 8 (19 January 2007), 17.
    by Michael R Seringhaus, Mark B Gerstein
    posted to knowledge-sharing by yas to the group T_lab on 2007-05-24 17:16:56 as ** along with 8 people and 1 group chad_davis gpalidwor dullhunk hpiwowar erisu grahamc ach cerami ParkinsonLab_at_MaRS
  • The database revolution
    Nature, Vol. 445, No. 7125. (18 January 2007), pp. 229-230.
    posted to database comments by yas to the group T_lab on 2007-05-24 17:08:49 as **
  • Structured digital abstract makes text mining easy
    Nature, Vol. 447, No. 7141. (09 May 2007), pp. 142-142.
    by Mark Gerstein, Michael Seringhaus, Stanley Fields
    posted to text-mining comments by yas to the group T_lab on 2007-05-24 16:55:03 as ** along with 2 people dullhunk mircea
  • Text mining and protein annotations: the construction and use of protein description sentences.
    Genome Inform, Vol. 17, No. 2. (2006), pp. 121-130.
    by M Krallinger, R Malik, A Valencia
    posted to text-mining protein-function by yas to the group T_lab on 2007-05-24 16:53:30 as ** along with 1 person florianleitner
  • Estimating the annotation error rate of curated GO database sequence annotations
    BMC Bioinformatics, Vol. 8, No. 1. (2007)
    by Craig Jones, Alfred Brown, Ute Baumann
    posted to ontology by yas to the group T_lab on 2007-05-23 13:04:53 as ** along with 3 people and 1 group cdallett grahamc sgoetz ParkinsonLab_at_MaRS
  • BioPP: A Tool for Web-publication of Biological Networks
    BMC Bioinformatics, Vol. 8, No. 1. (2007)
    by Ganesh Viswanathan, German Nudelman, Sonali Patil, Stuart Sealfon
    posted to software protein-function by yas to the group T_lab on 2007-05-23 13:03:50 as ** along with 2 people jyuh thomaskelder
  • Modeling cellular machinery through biological network comparison
    Nature Biotechnology, Vol. 24, No. 4. (06 April 2006), pp. 427-433.
    by Roded Sharan, Trey Ideker
    posted to protein-protein-interactions protein-function-prediction network-analysis by yas to the group T_lab on 2007-05-22 06:30:37 as ** along with 16 people and 1 group carlk cdeane tmmurali kuhn tuck balajis wnpx ma_ko gurkanbebek koller gcalda grahamc massivemayhem karfunkel mingzhi vietanh0 ParkinsonLab_at_MaRS
  • Answering Clinical Questions with Knowledge-Based and Statistical Techniques
    Computational Linguistics, Vol. 33, No. 1. (March 2007), pp. 63-103.
    by Dina Demner-Fushman, Jimmy Lin
    edited by Robert Dale
    posted to question-answering nlp by yas to the group T_lab on 2007-05-21 10:04:44 as ** along with 1 person and 1 group henk-cul dbmi-nlp
  • Question Answering in Restricted Domains: An Overview
    Computational Linguistics, Vol. 33, No. 1. (March 2007), pp. 41-61.
    by Diego Mollá, José L Vicedo
    edited by Robert Dale
    posted to review question-answering nlp by yas to the group T_lab on 2007-05-21 08:56:33 as **
  • Reactome: a knowledgebase of biological pathways.
    Nucleic Acids Res, Vol. 33, No. Database issue. (1 January 2005)
    by G Joshi-Tope, M Gillespie, I Vastrik, P D'Eustachio, E Schmidt, B de Bono, B Jassal, GR Gopinath, GR Wu, L Matthews, S Lewis, E Birney, L Stein
    posted to protein-function database by yas to the group T_lab on 2007-05-02 06:26:19 as ** along with 8 people jyuh aalibes kuhn dullhunk duartemolha massivemayhem cerami yggdrasil
  • The PANTHER database of protein families, subfamilies, functions and pathways.
    Nucleic Acids Res, Vol. 33, No. Database issue. (1 January 2005)
    by H Mi, B Lazareva-Ulitsky, R Loo, A Kejariwal, J Vandergriff, S Rabkin, N Guo, A Muruganujan, O Doremieux, MJ Campbell, H Kitano, PD Thomas
    posted to protein-function database by yas to the group T_lab on 2007-05-02 06:24:52 as ** along with 3 people and 1 group AlexanderPico Cortel xico WetBiology
  • Event ontology: a pathway-centric ontology for biological processes.
    Pac Symp Biocomput (2006), pp. 152-163.
    by T Kushida, T Takagi, KI Fukuda
    posted to ontology by yas to the group T_lab on 2007-05-02 06:22:53 as ** along with 2 people and 3 groups thomaskelder jago OER_Open_Educational_Resources Global_health_enterprise_architecture e-maintenance
  • The connectivity map.
    Nat Chem Biol, Vol. 2, No. 12. (December 2006), pp. 663-664.
    by SW Michnick
    posted to gene-expression comments by yas to the group T_lab on 2007-05-01 12:48:21 as **
  • The Connectivity Map: using gene-expression signatures to connect small molecules, genes, and disease.
    Science, Vol. 313, No. 5795. (29 September 2006), pp. 1929-1935.
    by J Lamb, ED Crawford, D Peck, JW Modell, IC Blat, MJ Wrobel, J Lerner, JP Brunet, A Subramanian, KN Ross, M Reich, H Hieronymus, G Wei, SA Armstrong, SJ Haggarty, PA Clemons, R Wei, SA Carr, ES Lander, TR Golub
    posted to gene-expression by yas to the group T_lab on 2007-05-01 12:47:17 as ** along with 21 people and 8 groups askrajiv BragilMassoud jyuh kuhn jfr balajis marcius lhonigberg neveaire kengg ealloza koller mlovell jdiggans ezra jeremymiller frohike massivemayhem lp2 pablomendes jdiezperezj Biostatistics Computational-Genomics Bioinformatics Neuroscience BioinfoCIPF SGU-CIPF GeschwindLab Plantandetc
  • The PROSITE database.
    Nucleic Acids Res, Vol. 34, No. Database issue. (1 January 2006)
    by N Hulo, A Bairoch, V Bulliard, L Cerutti, E De Castro, PS Langendijk-Genevaux, M Pagni, CJ Sigrist
    posted to protein-function database by yas to the group T_lab on 2007-05-01 12:36:32 as ** along with 5 people happy_manatee sriram_s neils massivemayhem siebertm
  • ORegAnno: an open access database and curation system for literature-derived promoters, transcription factor binding sites and regulatory variation
    Bioinformatics, Vol. 22, No. 5. (1 March 2006), pp. 637-640.
    by SB Montgomery, OL Griffith, CM Bergman, M Bilenky, ED Pleasance, Y Prychyna, X Zhang, SJM Jones
    posted to protein-function database by yas to the group T_lab on 2007-04-30 14:58:48 as ** along with 2 people and 2 groups cisevol fpattyn cis-regulatory-evolution BergmanLab
  • Drosophila DNase I footprint database: a systematic genome annotation of transcription factor binding sites in the fruitfly, Drosophila melanogaster.
    Bioinformatics, Vol. 21, No. 8. (15 April 2005), pp. 1747-1749.
    by CM Bergman, JW Carlson, SE Celniker
    posted to text-mining tagging-or-annotation database by yas to the group T_lab on 2007-04-30 10:19:30 as ** along with 1 person and 1 group indigoviolet EisenLab
  • A text-mining analysis of the human phenome
    European Journal of Human Genetics, Vol. aop, No. current.
    by Marc A van Driel, Jorn Bruggeman, Gert Vriend, Han G Brunner, Jack AM Leunissen,
    posted to text-mining protein-protein-interactions by yas to the group T_lab on 2007-04-30 09:42:25 as ** along with 2 people and 2 groups jyuh dejori ic4 generif_paper
  • The tYNA platform for comparative interactomics: a web tool for managing, comparing and mining multiple networks.
    Bioinformatics, Vol. 22, No. 23. (1 December 2006), pp. 2968-2970.
    by KY Yip, H Yu, PM Kim, M Schultz, M Gerstein
    posted to software network-analysis by yas to the group T_lab on 2007-04-21 07:11:02 as **
  • The Biomolecular Interaction Network Database and related tools 2005 update.
    Nucleic Acids Res, Vol. 33, No. Database issue. (1 January 2005)
    by C Alfarano, CE Andrade, K Anthony, N Bahroos, M Bajec, K Bantoft, D Betel, B Bobechko, K Boutilier, E Burgess, K Buzadzija, R Cavero, C D'Abreo, I Donaldson, D Dorairajoo, MJ Dumontier, MR Dumontier, V Earles, R Farrall, H Feldman, E Garderman, Y Gong, R Gonzaga, V Grytsan, E Gryz, V Gu, E Haldorsen, A Halupa, R Haw, A Hrvojic, L Hurrell, R Isserlin, F Jack, F Juma, A Khan, T Kon, S Konopinsky, V Le, E Lee, S Ling, M Magidin, J Moniakis, J Montojo, S Moore, B Muskat, I Ng, JP Paraiso, B Parker, G Pintilie, R Pirone, JJ Salama, S Sgro, T Shan, Y Shu, J Siew, D Skinner, K Snyder, R Stasiuk, D Strumpf, B Tuekam, S Tao, Z Wang, M White, R Willis, C Wolting, S Wong, A Wrong, C Xin, R Yao, B Yates, S Zhang, K Zheng, T Pawson, BF Ouellette, CW Hogue
    posted to protein-protein-interactions database by yas to the group T_lab on 2007-04-20 09:20:56 as ** along with 4 people and 2 groups balajis zlu frohike dagmar dIEMoSIRIS compneur
  • BIND--a data specification for storing and describing biomolecular interactions, molecular complexes and pathways.
    Bioinformatics, Vol. 16, No. 5. (May 2000), pp. 465-477.
    by GD Bader, CW Hogue
    posted to protein-protein-interactions database by yas to the group T_lab on 2007-04-20 09:16:38 as ** along with 3 people blackbart Evangelia acarbo
  • PubFocus: Semantic MEDLINE/PubMed citations analytics through integration of controlled biomedical dictionaries and ranking algorithm
    BMC Bioinformatics, Vol. 7 (02 October 2006), 424.
    by Maksim V Plikus, Zina Zhang, Cheng-Ming Chuong
    posted to software citation-context by yas to the group T_lab on 2007-04-20 03:31:45 as ** along with 5 people and 1 group irenas Enro dullhunk Gaetan adoms dbk-lab
  • botXminer: mining biomedical literature with a new web-based application.
    Nucleic Acids Res, Vol. 34, No. Web Server issue. (1 July 2006)
    by U Mudunuri, R Stephens, D Bruining, D Liu, FJ Lebeda
    posted to web-service text-mining by yas to the group T_lab on 2007-04-19 16:05:08 as ** along with 2 people Enro jyuh
  • PubNet: a flexible system for visualizing literature derived networks.
    Genome Biol, Vol. 6, No. 9. (2005)
    by SM Douglas, GT Montelione, M Gerstein
    posted to visualization text-mining by yas to the group T_lab on 2007-04-19 15:58:23 as ** along with 7 people and 4 groups A_Olympia aalibes yish leonardo nur77 dullhunk ianturton mathgamespatterns dtl vds-arg eni
  • Functional centering: grounding referential coherence in information structure
    Comput. Linguist., Vol. 25, No. 3. (1999), pp. 309-344.
    by Michael Strube, Udo Hahn
    posted to nlp by yas to the group T_lab on 2007-03-26 09:15:58 as **
  • WYSIWYM: building user interfaces with natural language feedback
    (2003), pp. 203-206.
    by Roger Evans, Richard Power
    posted to nlp by yas to the group T_lab on 2007-03-26 09:12:55 as **
  • Filling preposition-based templates to capture information from medical abstracts.
    Pac Symp Biocomput (2002), pp. 350-361.
    by G Leroy, H Chen
    posted to information-extraction by yas to the group T_lab on 2007-03-26 09:08:40 as ** along with 2 people and 1 group helliontroy mircea biomedical-nlp
  • Creating knowledge repositories from biomedical reports: the MEDSYNDIKATE text mining system.
    Pac Symp Biocomput (2002), pp. 338-349.
    by U Hahn, M Romacker, S Schulz
    posted to information-extraction by yas to the group T_lab on 2007-03-26 09:02:48 as ** along with 1 person and 1 group irenas dbk-lab
    • Note: You may cite this page as: http://www.citeulike.org/group/474

    Result page: 1 2 3 4 5 6 7 8 Next RIS BibTeX RSS
    CiteULike organises scholarly (or academic) papers or literature and provides bibliographic (which means it makes bibliographies) for universities and higher education establishments. It helps undergraduates and postgraduates. People studying for PhDs or in postdoctoral (postdoc) positions. The service is similar in scope to EndNote or RefWorks or any other reference manager like BibTeX, but it is a social bookmarking service for scientists and humanities researchers.