Group: T_lab - with tag text-mining [57 articles] Export

Recent papers posted by members of the T_lab group with tag text-mining

	Web services in the life sciences [My Copy] Drug Discovery Today, Vol. 10, No. 12. (15 June 2005), pp. 865-871. by Vasa Curcin, Moustafa Ghanem, Yike Guo posted to web-service text-mining by yas to the group T_lab on 2007-08-23 08:28:58 as along with 7 people and 1 group LeightonP rdhyee nicklynch moborg fisherp Barend dullhunk Blog_and_Wiki_Research
	Text-derived concept profiles support assessment of DNA microarray data for acute myeloid leukemia and for androgen receptor stimulation. [My Copy] BMC bioinformatics, Vol. 8, No. 1. (18 January 2007), 14. by Rob Jelier, Guido Jenster, Lambert C. Dorssers, et al.Bas J. Wouters, Peter J. Hendriksen, Barend Mons, Ruud Delwel, Jan A. Kors posted to text-mining microarray by yas to the group T_lab on 2007-07-23 08:03:36 as along with 6 people helenlinguist robjelier jfr hpiwowar fisherp Barend
	Structured digital abstract makes text mining easy [My Copy] Nature, Vol. 447, No. 7141. (09 May 2007), pp. 142-142. by Mark Gerstein, Michael Seringhaus, Stanley Fields posted to text-mining comments by yas to the group T_lab on 2007-05-24 16:55:03 as along with 5 people guelke bk66 henk-cul dullhunk mircea
	Text mining and protein annotations: the construction and use of protein description sentences. [My Copy] Genome Inform, Vol. 17, No. 2. (2006), pp. 121-130. by M. Krallinger, R. Malik, A. Valencia posted to text-mining protein-function by yas to the group T_lab on 2007-05-24 16:53:30 as along with 1 person florianleitner
	Drosophila DNase I footprint database: a systematic genome annotation of transcription factor binding sites in the fruitfly, Drosophila melanogaster. [My Copy] Bioinformatics, Vol. 21, No. 8. (15 April 2005), pp. 1747-1749. by C. M. Bergman, J. W. Carlson, S. E. Celniker posted to text-mining tagging-or-annotation database by yas to the group T_lab on 2007-04-30 10:19:30 as along with 1 person and 1 group indigoviolet EisenLab
	A text-mining analysis of the human phenome. [My Copy] European journal of human genetics : EJHG, Vol. 14, No. 5. (May 2006), pp. 535-542. by Marc A. van Driel, Jorn Bruggeman, Gert Vriend, Han G. Brunner, Jack A. Leunissen posted to text-mining protein-protein-interactions by yas to the group T_lab on 2007-04-30 09:42:25 as along with 6 people and 2 groups daed daforerog saket jiny guhjy dejori ic4 generif_paper
	botXminer: mining biomedical literature with a new web-based application. [My Copy] Nucleic Acids Res, Vol. 34, No. Web Server issue. (1 July 2006) by U. Mudunuri, R. Stephens, D. Bruining, D. Liu, F. J. Lebeda posted to web-service text-mining by yas to the group T_lab on 2007-04-19 16:05:08 as along with 2 people Enro guhjy
	PubNet: a flexible system for visualizing literature derived networks. [My Copy] Genome biology, Vol. 6, No. 9. (2005) by Shawn M. Douglas, Gaetano T. Montelione, Mark Gerstein posted to visualization text-mining by yas to the group T_lab on 2007-04-19 15:58:23 as along with 9 people and 4 groups daforerog guhjy A_Olympia aalibes yish leonardo nur77 dullhunk ianturton mathgamespatterns dtl vds-arg eni
	Text Mining Biomedical Literature for Discovering Gene-to-Gene Relationships: A Comparative Study of Algorithms [My Copy] IEEE/ACM Trans. Comput. Biol. Bioinformatics, Vol. 2, No. 1. (January 2005), pp. 62-76. by Ying Liu, Shamkant B. Navathe, Jorge Civera, et al.Venu Dasigi, Ashwin Ram, Brian J. Ciliax, Ray Dingledine posted to clustering text-mining by yas to the group T_lab on 2007-03-06 13:17:11 as along with 3 people wilbur snuppepuppan zhengzhong
	Text-mining and information-retrieval services for molecular biology [My Copy] Genome Biology, Vol. 6, No. 7. (2005), 224. by Martin Krallinger, Alfonso Valencia posted to information-retrieval text-mining by yas to the group T_lab on 2007-03-02 13:28:32 as along with 17 people and 5 groups carelcad artaban421 Scis0000002 martingerner lmichan henk-cul vkwn A_Hoogendam fisherp irenas Enro carlblesius textoris caporaso shimah78us cjeans spinaltap526 dbk-lab Blog_and_Wiki_Research mgh-lcs hst-bmi biomedical-nlp
	A literature-based similarity metric for biological processes [My Copy] BMC Bioinformatics, Vol. 7 (26 July 2006), 363. by Monica Chagoyen, Pedro Carmona-Saez, Concha Gil, Jose M. Carazo, Alberto Pascual-Montano posted to text-mining by yas to the group T_lab on 2007-02-27 10:41:00 as
	Creating a text data-mining application for use in public health informatics. [My Copy] Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference, Vol. 5 (2004), pp. 3214-3216. by M. C. Michel, L. A. Bero, T. Bright posted to text-mining software by yas to the group T_lab on 2007-02-09 15:03:43 as
	Mining literature for systems biology [My Copy] Brief Bioinform, Vol. 7, No. 4. (1 December 2006), pp. 399-406. by Phoebe M. Roberts posted to review systems-biology text-mining by yas to the group T_lab on 2006-10-20 04:52:34 as along with 4 people and 1 group abhishek_tiwari Scis0000002 irenas jacky957 dbk-lab
	Text mining and its potential applications in systems biology. [My Copy] Trends Biotechnol (11 October 2006) by Sophia Ananiadou, Douglas B B. Kell, Jun-Ichi I. Tsujii posted to review text-mining by yas to the group T_lab on 2006-10-20 04:39:09 as along with 17 people and 2 groups artaban421 eesruiz liblab henk-cul guhjy irenas jfr dullhunk fisherp jacky957 daniel_schober dejori pablomendes pmendes TheresaNiederberger alanrw satre ImagCom - Biomedical Text Computing dbk-lab
	Combining evidence, biomedical literature and statistical dependence: new insights for functional annotation of gene sets. [My Copy] BMC Bioinformatics, Vol. 7, No. 1. (4 May 2006) by Marc Aubry, Annabelle Monnier, Celine Chicault, et al.Marie de Tayrac, Marie-Dominique D. Galibert, Anita Burgun, Jean Mosser posted to text-mining by yas to the group T_lab on 2006-05-15 08:54:47 as along with 5 people and 3 groups irenas dullhunk caporaso kkaiser yggdrasil dbk-lab biomedical-nlp IEG
	Statistical modeling of biomedical corpora: mining the Caenorhabditis Genetic Center Bibliography for genes related to life span. [My Copy] BMC Bioinformatics, Vol. 7, No. 1. (8 May 2006) by D M. Blei, K Franks, M I. Jordan, I S. Mian posted to text-mining by yas to the group T_lab on 2006-05-15 08:29:03 as along with 3 people and 3 groups irenas caporaso oannes dbk-lab biomedical-nlp Regulomics_UCHSC
	An online literature mining tool for protein phosphorylation. [My Copy] Bioinformatics (27 April 2006) by X Yuan, Z Z Z. Hu, H T T. Wu, et al.M Torii, M Narayanaswamy, K E E. Ravikumar, K Vijay-Shanker, C H H. Wu posted to software text-mining by yas to the group T_lab on 2006-05-08 10:50:29 as along with 2 people and 1 group irenas neils dbk-lab
	Conceptual biology, hypothesis discovery, and text mining: Swanson's legacy [My Copy] Biomedical Digital Libraries, Vol. 3, No. 1. (03 April 2006), 2. by Tanja Bekhuis posted to text-mining by yas to the group T_lab on 2006-04-26 12:39:00 as along with 6 people and 2 groups mitko lmichan guhjy irenas Enro JeffreyDemaine dbk-lab CISTI-Research
	Genestrace: phenomic knowledge discovery via structured terminology. [My Copy] Pac Symp Biocomput (2005), pp. 103-114. by M. N. Cantor, I. N. Sarkar, O. Bodenreider, Y. A. Lussier posted to text-mining by yas to the group T_lab on 2006-04-11 03:25:02 as
	CoPub Mapper: mining MEDLINE based on search term co-publication. [My Copy] BMC Bioinformatics, Vol. 6, No. 1. (11 March 2005) by Blaise T. Alako, Antoine Veldhoven, Sjozef van Baal, et al.Rob Jelier, Stefan Verhoeven, Ton Rullmann, Jan Polman, Guido Jenster posted to text-mining by yas to the group T_lab on 2006-04-10 12:44:03 as along with 5 people robjelier snuppepuppan guhjy jtextori fisherp
	Text Mining: Predictive Methods for Analyzing Unstructured Information [My Copy] (25 October 2004) by Sholom Weiss, Nitin Indurkhya, Tong Zhang, Fred Damerau posted to text-mining by yas to the group T_lab on 2006-02-27 13:29:46 as along with 4 people RandolphCarter vlasto albion95410 imrchen
	Survey of Text Mining : Clustering, Classification, and Retrieval [My Copy] (09 September 2003) by Michael Berry posted to text-mining by yas to the group T_lab on 2006-02-27 13:28:58 as along with 4 people sebis-bibliothek Sulpicus imrchen mircea
	TXTGate: profiling gene groups with text-based information. [My Copy] Genome Biol, Vol. 5, No. 6. (2004) by P. Glenisson, B. Coessens, S. Van Vooren, J. Mathys, Y. Moreau, B. De Moor posted to text-mining by yas to the group T_lab on 2006-02-14 17:06:49 as
	Analysis of genomic and proteomic data using advanced literature mining. [My Copy] J Proteome Res, Vol. 2, No. 4. (g 2003), pp. 405-412. by Y. Hu, L. M. Hines, H. Weng, et al.D. Zuo, M. Rivera, A. Richardson, J. LaBaer posted to text-mining by yas to the group T_lab on 2006-02-14 16:52:22 as along with 1 person and 1 group irenas dbk-lab
	Systematic Association of Genes to Phenotypes by Genome and Literature Mining [My Copy] PLoS Biol, Vol. 3, No. 5. (5 April 2005), e134. by Jan O. Korbel, Tobias Doerks, Lars J. Jensen, et al.Carolina Perez-Iratxeta, Szymon Kaczanowski, Sean D. Hooper, Miguel A. Andrade, Peer Bork posted to information-extraction text-mining by yas to the group T_lab on 2006-01-25 05:34:09 as along with 14 people gjuggler anthropomorphism Enro setar miguel tmmurali kuhn imouthesmp balajis benny hpiwowar fisherp jdiggans larsjuhljensen
	G2D: A Tool for Mining Genes Associated with Disease. [My Copy] BMC Genet, Vol. 6, No. 1. (22 August 2005) by Carolina Perez-Iratxeta, Matthias Wjst, Peer Bork, Miguel A. Andrade posted to text-mining by yas to the group T_lab on 2006-01-25 04:06:34 as along with 2 people henk-cul miguel
	Untangling text data mining [My Copy] In Proceedings of ACL'99: the 37th Annual Meeting of the Association for Computational Linguistics (1999) by M. Hearst posted to text-mining by yas to the group T_lab on 2006-01-25 02:40:27 as along with 2 people and 2 groups caomo markymaypo AI ARTFL
	Expert knowledge without the expert: integrated analysis of gene expression and literature to derive active functional contexts. [My Copy] Bioinformatics, Vol. 21 Suppl 2 (1 September 2005) by R. Küffner, K. Fundel, R. Zimmer posted to text-mining by yas to the group T_lab on 2006-01-24 12:48:42 as along with 6 people and 1 group irenas chad_davis fisherp incovoma vlachmore TheresaNiederberger dbk-lab
	Literature mining for the biologist: from information retrieval to biological discovery [My Copy] Nature Reviews Genetics, Vol. 7, No. 2. (01 February 2006), pp. 119-129. by Lars J. Jensen, Jasmin Saric, Peer Bork posted to information-extraction review text-mining by yas to the group T_lab on 2006-01-23 07:54:54 as along with 47 people and 3 groups tanyacovi6 MARCOUNAM eudominguezmartin sm-rush LEONRANGEL artaban421 rocling bertelsen virolog dipenps druvus Zephyrus fgibson psique lmichan cisevol ilyashl henk-cul daforerog isimpson dansullivanblk yggdrasil Enro guhjy kuhn dullhunk hpiwowar dgront caporaso zlu jacky957 lynnefox jdiggans cjeans ghattem michaelmampaey dejori jandot mircea farzanehs larsjuhljensen adoms skumagai TheresaNiederberger satre akastrin ibuch BergmanLab biomedical-nlp ADMiRes
	PubMatrix: a tool for multiplex literature mining. [My Copy] BMC Bioinformatics, Vol. 4 (10 December 2003) by K. G. Becker, D. A. Hosack, G. Dennis, et al.R. A. Lempicki, T. J. Bright, C. Cheadle, J. Engel posted to text-mining by yas to the group T_lab on 2006-01-19 07:29:59 as along with 3 people ianturton fisherp bertelsen
	Evaluation of text data mining for database curation: lessons learned from the KDD Challenge Cup. [My Copy] Bioinformatics, Vol. 19 Suppl 1 (2003) by A. S. Yeh, L. Hirschman, A. A. Morgan posted to text-mining by yas to the group T_lab on 2006-01-18 02:16:00 as along with 4 people and 2 groups svozil irenas natsu blackbart Bioinformatics dbk-lab
	Dragon Plant Biology Explorer. A Text-Mining Tool for Integrating Associations between Genetic and Biochemical Entities with Genome Annotation and Biochemical Terms Lists. [My Copy] Plant Physiol, Vol. 138, No. 4. (August 2005), pp. 1914-1925. by V. B. Bajic, M. Veronika, P. S. Veladandi, et al.A. Meka, M. W. Heng, K. Rajaraman, H. Pan, S. Swarup posted to text-mining by yas to the group T_lab on 2006-01-15 17:47:59 as along with 2 people and 1 group hubcite irenas dbk-lab
	A survey of methodologies and technologies for data mining and intelligent data discovery [My Copy] (2002), pp. 41-59. by Ricardo Gonzalez, Ali Kamrani posted to literature-based-discovery text-mining by yas to the group T_lab on 2006-01-15 17:46:38 as along with 1 person badger_master
	Ranking the whole MEDLINE database according to a large training set using text indexing. [My Copy] BMC Bioinformatics, Vol. 6, No. 1. (24 March 2005) by Brian P. Suomela, Miguel A. Andrade posted to text-mining by yas to the group T_lab on 2006-01-15 17:37:58 as along with 5 people and 1 group hpiwowar irenas miguel gpalidwor mircea dbk-lab
	Integration of text- and data-mining using ontologies successfully selects disease gene candidates. [My Copy] Nucleic acids research, Vol. 33, No. 5. (2005), pp. 1544-1552. by Nicki Tiffin, Janet F. Kelso, Alan R. Powell, Hong Pan, Vladimir B. Bajic, Winston A. Hide posted to text-mining by yas to the group T_lab on 2006-01-15 17:32:29 as along with 6 people and 1 group carelcad henk-cul daforerog irenas benny fisherp dbk-lab
	Text mining functional keywords associated with genes. [My Copy] Medinfo, Vol. 11, No. Pt 1. (2004), pp. 292-296. by Y. Liu, M. Brandon, S. Navathe, R. Dingledine, B. J. Ciliax posted to text-mining by yas to the group T_lab on 2006-01-15 17:28:59 as
	Discovering protein similarity using natural language processing. [My Copy] Proc AMIA Symp (2002), pp. 677-681. by I. N. Sarkar, T. C. Rindflesch posted to text-mining by yas to the group T_lab on 2006-01-15 17:27:41 as
	A literature network of human genes for high-throughput analysis of gene expression. [My Copy] Nature genetics, Vol. 28, No. 1. (May 2001), pp. 21-28. by T. K. Jenssen, A. Laegreid, J. Komorowski, E. Hovig posted to text-mining by yas to the group T_lab on 2006-01-15 17:15:08 as along with 13 people and 3 groups vkwn biblio24 guhjy robert85 irenas miguel okarsligil lfriedl balajis benny dullhunk adoms TheresaNiederberger dbk-lab kdl Bioinformatics
	Facts from text-is text mining ready to deliver? [My Copy] PLoS Biol, Vol. 3, No. 2. (February 2005) by D. Rebholz-Schuhmann, H. Kirsch, F. Couto posted to review text-mining by yas to the group T_lab on 2006-01-11 16:02:48 as along with 16 people and 2 groups arafalov henk-cul raiyar snuppepuppan irenas dullhunk t11 onca dgront caporaso shimah78us daniel_schober dejori adoms jfr hpiwowar dbk-lab biomedical-nlp
	Adaptive text mining: inferring structure from sequences [My Copy] Journal of Discrete Algorithms, Vol. 2, No. 2. (June 2004), pp. 137-159. by I. Witten posted to text-mining by yas to the group T_lab on 2006-01-11 16:01:49 as along with 3 people and 2 groups badger_master irenas markymaypo dbk-lab ARTFL
	Mining the biomedical literature in the genomic era: an overview. [My Copy] J Comput Biol, Vol. 10, No. 6. (2003), pp. 821-855. by H. Shatkay, R. Feldman posted to review text-mining by yas to the group T_lab on 2006-01-11 16:00:25 as along with 12 people and 2 groups artaban421 mitko lmichan henk-cul cisevol irenas Enro miguel benny balex adoms aheilbut BergmanLab dbk-lab
	Accomplishments and challenges in literature data mining for biology. [My Copy] Bioinformatics, Vol. 18, No. 12. (December 2002), pp. 1553-1561. by L. Hirschman, J. C. Park, J. Tsujii, L. Wong, C. H. Wu posted to review text-mining by yas to the group T_lab on 2006-01-11 15:59:37 as along with 7 people and 5 groups irenas Enro benny kehan caporaso vlachmore satre dbk-lab biodiversity_conservation Bioinformatics biomedical-nlp GrassBase
	Getting to the (c)ore of knowledge: mining biomedical literature. [My Copy] Int J Med Inform, Vol. 67, No. 1-3. (4 December 2002), pp. 7-18. by B. de Bruijn, J. Martin posted to text-mining by yas to the group T_lab on 2006-01-11 15:58:20 as along with 5 people and 2 groups artaban421 svozil irenas Enro hpiwowar Bioinformatics dbk-lab
	Term domain distribution analysis: a data mining tool for text databases. [My Copy] Methods Inf Med, Vol. 38, No. 2. (June 1999), pp. 96-101. by J. A. Goldman, W. W. Chu, D. S. Parker, R. M. Goldman posted to nlp text-mining by yas to the group T_lab on 2006-01-11 14:22:15 as along with 1 person and 1 group irenas dbk-lab
	Evaluation of biomedical text-mining systems: Lessons learned from information retrieval [My Copy] Briefings in Bioinformatics, Vol. 6, No. 4. (December 2005), pp. 344-356. by Hersh, William posted to review text-mining by yas to the group T_lab on 2006-01-09 04:38:24 as
	Association of genes to genetically inherited diseases using data mining [My Copy] Nature Genetics, Vol. 31, No. 3. (13 May 2002), pp. 316-319. by Carolina Perez-Iratxeta, Peer Bork, Miguel A. Andrade posted to text-mining by yas to the group T_lab on 2005-12-29 03:53:30 as along with 9 people and 1 group anthropomorphism irenas daforerog henk-cul jiny kittyraysia BioGeek miguel fisherp dbmi-nlp
	Dragon TF Association Miner: a system for exploring transcription factor associations through text-mining. [My Copy] Nucleic Acids Res, Vol. 32, No. Web Server issue. (1 July 2004) by H. Pan, L. Zuo, V. Choudhary, et al.Z. Zhang, S. H. Leow, F. T. Chong, Y. Huang, V. W. Ong, B. Mohanty, S. L. Tan, S. P. Krishnan, V. B. Bajic posted to text-mining by yas to the group T_lab on 2005-12-12 10:41:38 as along with 1 person and 1 group irenas dbk-lab
	Do you do text? [My Copy] Bioinformatics (29 September 2005) by Christian Blaschke, Alexander Yeh, Evelyn Camon, et al.Marc Colosimo, Rolf Apweiler, Lynette Hirschman, Alfonso Valencia posted to review text-mining by yas to the group T_lab on 2005-11-29 03:49:00 as along with 2 people and 2 groups marcius maryee BioinfoCIPF SGU-CIPF
	Text mining for metabolic pathways, signaling cascades, and protein networks. [My Copy] Sci STKE, Vol. 2005, No. 283. (10 May 2005) by R. Hoffmann, M. Krallinger, E. Andres, J. Tamames, C. Blaschke, A. Valencia posted to text-mining by yas to the group T_lab on 2005-11-28 15:27:32 as along with 7 people and 4 groups eesruiz irenas matzke kuhn textoris marcius fisherp ImagCom - Biomedical Text Computing dbk-lab BioinfoCIPF SGU-CIPF
	Implementing the iHOP concept for navigation of biomedical literature. [My Copy] Bioinformatics, Vol. 21 Suppl 2 (1 September 2005) by R. Hoffmann, A. Valencia posted to text-mining by yas to the group T_lab on 2005-11-28 06:25:19 as along with 4 people and 3 groups mitko textoris marcius mroos BioinfoCIPF SGU-CIPF AID

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bioinformatics	79
nlp	63
review	63
ner	52
text	47
biomedical	39
pubmed	39
document-mining	37
information-retrieval	34
data-mining	33
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disambiguation	22
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lbd	18
annotation	17
gene	16
literature-based-discovery	16
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mining	14
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document	13
software	13
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semantic	12
tools	12
database	11
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vector-space-model	11
basic	10
all	9
sophia-ananiadou	9
biocreative	8
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extraction	8
geocoding	8
medline	8
named-entity-recognition	8
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full-text	7
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ppi	7
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refine	7
relation-extraction	7
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literature-mining	6
ma	6
protein	6
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search	6
semantic-web	6
sentiment-extraction	6
som	6
visualization	6
bib	5
co-occurrence	5
file-import-09-04-28	5
gene-gene	5
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health	5
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hypothesis-generation	5
information_retrieval	5
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mesh	5
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natural-language-processing	5
onto	5
txtmining	5
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full	4
information	4
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msc	4
networks	4
news-media	4
ontologies	4
prediction	4
tool	4
web-mining	4

Group: T_lab - with tag text-mining [57 articles] Export

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