Group: bioNetwork_sysBio - with tag journal [34 articles] Export Sort

Recent papers posted by members of the bioNetwork_sysBio group with tag journal

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	Forcing cells to change lineages [My Copy] Nature In Nature, Vol. 462, No. 7273. (03 December 2009), pp. 587-594. by Thomas Graf, Tariq Enver posted to nature journal cell_reprogram by joseph_x_zhou to the group bioNetwork_sysBio on 2009-12-03 21:42:12 as along with 3 people and 1 group adampah lees balabu Orengo Group Journal Picks
	Construction of a genetic toggle switch in Escherichia coli [My Copy] Nature, Vol. 403, No. 6767. (20 January 2000), pp. 339-342. by Timothy S. Gardner, Charles R. Cantor, James J. Collins posted to nature journal gene_switch gene_netwok by joseph_x_zhou to the group bioNetwork_sysBio on 2009-12-01 21:11:39 as along with 13 people dbikard genocad sjayanthi marcio rdowell reidw Borelli ClaireFB lenov rklancer satsumakenji tvdbulck austin
	Biological rhythms: Circadian clocks limited by noise [My Copy] Nature, Vol. 403, No. 6767. (20 January 2000), pp. 267-268. by Naama Barkai, Stanislas Leibler posted to nature journal circadian_clock by joseph_x_zhou to the group bioNetwork_sysBio on 2009-12-01 21:05:09 as along with 1 person and 1 group adepace EisenLab
	Potential landscape and flux framework of nonequilibrium networks: Robustness, dissipation, and coherence of biochemical oscillations [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 34. (26 August 2008), pp. 12271-12276. by Jin Wang, Li Xu, Erkang Wang posted to gene_network_dyn journal by joseph_x_zhou to the group bioNetwork_sysBio on 2009-06-30 20:48:42 as along with 2 people jjray sg45653
	Compositionality, stochasticity, and cooperativity in dynamic models of gene regulation. [My Copy] HFSP journal, Vol. 2, No. 1. (February 2008), pp. 17-28. by R. Blossey, L. Cardelli, A. Phillips posted to gene_regulation_network gene_switch grn journal by joseph_x_zhou to the group bioNetwork_sysBio on 2009-06-25 20:44:28 as along with 2 people leemond31 jjray
	Directed transdifferentiation of mouse mesoderm to heart tissue by defined factors [My Copy] Nature (26 April 2009) by Jun K. Takeuchi, Benoit G. Bruneau posted to cell_reprogram heart_cell journal by joseph_x_zhou to the group bioNetwork_sysBio on 2009-06-25 20:17:41 as along with 3 people ynaito fenghezi leliavski
	Non-genetic heterogeneity a mutation-independent driving force for the somatic evolution of tumours [My Copy] Nature Reviews Genetics, Vol. 10, No. 5., pp. 336-342. by Amy Brock, Hannah Chang, Sui Huang posted to cancer journal sui by joseph_x_zhou to the group bioNetwork_sysBio on 2009-05-28 15:17:50 as along with 3 people and 1 group Zephyrus songpku myzhang Roswell Cancer Crosstalk
	Independent development of pancreatic alpha- and beta-cells from neurogenin3-expressing precursors: a role for the notch pathway in repression of premature differentiation. [My Copy] Diabetes, Vol. 49, No. 2. (February 2000), pp. 163-176. by J. Jensen, R. S. Heller, T. Funder-Nielsen, et al.E. E. Pedersen, C. Lindsell, G. Weinmaster, O. D. Madsen, P. Serup posted to journal pancrea_dev vip by joseph_x_zhou to the group bioNetwork_sysBio on 2009-04-28 14:52:51 as
	How cells change their phenotype [My Copy] Nat Rev Mol Cell Biol, Vol. 3, No. 3. (March 2002), pp. 187-194. by David Tosh, Jonathan M. Slack posted to journal pancreas_reprogram by joseph_x_zhou to the group bioNetwork_sysBio on 2009-04-23 16:43:56 as
	Genomic analysis of regulatory network dynamics reveals large topological changes. [My Copy] Nature, Vol. 431, No. 7006. (16 September 2004), pp. 308-312. by N. M. Luscombe, M. M. Babu, H. Yu, M. Snyder, S. A. Teichmann, M. Gerstein posted to gene_regulation_network grn journal by joseph_x_zhou to the group bioNetwork_sysBio on 2009-04-16 15:42:38 as along with 24 people and 7 groups kentz behindtherabbit vertikalist camster snuppepuppan hununu icases lna lfriedl alexg nirfriedman dgront nickluscombe kairita comb kengg gespim koller timflutre fishtank cjeans rebeccamancy faion carlk BTS-PT-AS-CS dbk-lab kdl EBI-regulation TNT ColDyn Plantandetc
	Random Signal Fluctuations Can Reduce Random Fluctuations in Regulated Components of Chemical Regulatory Networks [My Copy] Physical Review Letters, Vol. 84, No. 23. (Jun 2000), pp. 5447-5450. by Johan Paulsson, M\aans Ehrenberg posted to bio_network_dyn journal by joseph_x_zhou to the group bioNetwork_sysBio on 2009-04-03 10:52:52 as along with 1 person jjray
	Symmetry Breaking of Fluctuation Dynamics by Noise Color [My Copy] Physical Review Letters, Vol. 84, No. 24. (Jun 2000), pp. 5470-5473. by M. Arrayás, M. I. Dykman, R. Mannella, P. V. E. Mcclintock, N. D. Stein posted to bio_network_dyn journal symmetry_break by joseph_x_zhou to the group bioNetwork_sysBio on 2009-04-03 10:49:28 as
	Origin of multicellular organisms as an inevitable consequence of dynamical systems [My Copy] The Anatomical Record, Vol. 268, No. 3. (2002), pp. 327-342. by Chikara Furusawa, Kunihiko Kaneko posted to bio_network_dyn journal multicellular by joseph_x_zhou to the group bioNetwork_sysBio on 2009-04-03 10:47:25 as
	Origin of Complexity in Multicellular Organisms [My Copy] Physical Review Letters, Vol. 84, No. 26. (Jun 2000), pp. 6130-6133. by Chikara Furusawa, Kunihiko Kaneko posted to cell_dev journal by joseph_x_zhou to the group bioNetwork_sysBio on 2009-03-31 21:12:19 as
	Sequential Branch Points in Hierarchical Cell Fate Determination [My Copy] (25 Mar 2009) by David Foster, Sui Huang, Stuart Kauffman posted to gene_regulation_network gene_switch grn journal kauffman by joseph_x_zhou to the group bioNetwork_sysBio on 2009-03-26 14:55:03 as
	A Computational Model for Understanding Stem Cell, Trophectoderm and Endoderm Lineage Determination [My Copy] PLoS ONE, Vol. 3, No. 10. (22 October 2008), e3478. by Vijay Chickarmane, Carsten Peterson posted to gene_regulation_network gene_switch grn journal by joseph_x_zhou to the group bioNetwork_sysBio on 2009-03-12 21:12:45 as along with 1 person akraemer
	Analysis of continuous-time switching networks [My Copy] Phys. D, Vol. 146, No. 1-4. (2000), pp. 165-199. by R. Edwards posted to gene_regulation_network gene_switch grn journal network network_dyn by joseph_x_zhou to the group bioNetwork_sysBio on 2009-03-12 20:09:14 as along with 1 person agonzale
	Highly Optimized Tolerance: Robustness and Design in Complex Systems [My Copy] Physical Review Letters, Vol. 84, No. 11. (13 Mar 2000), pp. 2529-2532. by J. M. Carlson, John Doyle posted to complex_network journal network_design_principals by joseph_x_zhou to the group bioNetwork_sysBio on 2009-03-10 21:49:14 as along with 6 people and 2 groups dannya222 abhishek_tiwari dpf krisl augusto VRadenovic AIRgroup DSTO-CAS
	Sniffers, buzzers, toggles and blinkers: dynamics of regulatory and signaling pathways in the cell [My Copy] Current Opinion in Cell Biology, Vol. 15, No. 2. (April 2003), pp. 221-231. by J. Tyson posted to gene_network_dyn gene_switch journal review by joseph_x_zhou to the group bioNetwork_sysBio on 2009-03-09 19:36:15 as along with 9 people saradtc tomd66 TimRooney Dangerfc Borelli dolchan cryptochrome oelemento bayesian
	Stability analysis of limit cycles in nonlinear feedback systems using describing functions: Improved results [My Copy] Circuits and Systems, IEEE Transactions on In Circuits and Systems, IEEE Transactions on, Vol. 31, No. 6. (1984), pp. 561-567. by R. Miller, A. Michel, G. Krenz posted to dynamic_sys journal limit_cycle stability_analysis by joseph_x_zhou to the group bioNetwork_sysBio on 2009-01-21 16:06:27 as
	Multistable Decision Switches for Flexible Control of Epigenetic Differentiation [My Copy] PLoS Comput Biol, Vol. 4, No. 11. (28 November 2008), e1000235. by Raúl Guantes, Juan F. Poyatos posted to cell_diff gene_network_dyn journal by joseph_x_zhou to the group bioNetwork_sysBio on 2009-01-20 21:41:21 as
	Stochasticity and the Molecular Mechanisms of Induced Pluripotency [My Copy] PLoS ONE, Vol. 3, No. 8. (2008), e3086. by Ben D. Macarthur, Colin P. Please, Richard O. Oreffo posted to gene_network_dyn ips journal stem_cell_model by joseph_x_zhou to the group bioNetwork_sysBio on 2009-01-20 21:37:11 as along with 3 people akraemer erel10 jjray
	Towards an understanding of lineage specification in hematopoietic stem cells: A mathematical model for the interaction of transcription factors GATA-1 and PU.1 [My Copy] Journal of Theoretical Biology, Vol. 241, No. 4. (21 August 2006), pp. 852-865. by Ingo Roeder, Ingmar Glauche posted to gene_network_dyn journal stem_cell_model by joseph_x_zhou to the group bioNetwork_sysBio on 2009-01-19 21:07:19 as along with 1 person mikaelhuss
	Navigability of complex networks [My Copy] Nat Phys, Vol. 5, No. 1. (January 2009), pp. 74-80. by Marian Boguna, Dmitri Krioukov, K. C. Claffy posted to hidden_space journal network by joseph_x_zhou to the group bioNetwork_sysBio on 2009-01-11 19:49:04 as
	A Gene Regulatory Network Subcircuit Drives a Dynamic Pattern of Gene Expression [My Copy] Science, Vol. 318, No. 5851. (2 November 2007), pp. 794-797. by Joel Smith, Christina Theodoris, Eric H. Davidson posted to gene_network_dyn gene_regulation_network journal by joseph_x_zhou to the group bioNetwork_sysBio on 2009-01-11 15:20:48 as along with 8 people and 1 group leemond31 jjray cwbrown lshaw shigepong zwang heliopais hpaces EisenLab
	Validation of qualitative models of genetic regulatory networks by model checking: analysis of the nutritional stress response in Escherichia coli [My Copy] Bioinformatics, Vol. 21, No. suppl_1. (1 June 2005), pp. i19-28. by Gregory Batt, Delphine Ropers, Hidde de Jong, et al.Johannes Geiselmann, Radu Mateescu, Michel Page, Dominique Schneider posted to gene_network_dyn journal qualitative_model by joseph_x_zhou to the group bioNetwork_sysBio on 2009-01-08 16:25:15 as
	Tweaking biological switches through a better understanding of bistability behavior [My Copy] Current Opinion in Biotechnology, Vol. 19, No. 5. (October 2008), pp. 475-481. by A. Chatterjee, Y. Kaznessis, W. Hu posted to gene_netwok gene_network_dyn gene_switch journal by joseph_x_zhou to the group bioNetwork_sysBio on 2008-12-30 21:12:13 as along with 1 person balicea
	Neutrality and Robustness in Evo-Devo: Emergence of Lateral Inhibition [My Copy] PLoS Comput Biol, Vol. 4, No. 11. (21 November 2008), e1000226. by Andreea Munteanu, Ricard V. Solé posted to gene_netwok gene_network_dyn journal by joseph_x_zhou to the group bioNetwork_sysBio on 2008-12-30 21:02:19 as along with 3 people and 2 groups bayesian dlobo bpcusack Evolutionary Dynamics Math Bio GEB
	Gene networks: how to put the function in genomics [My Copy] Trends in Biotechnology, Vol. 20, No. 11. (01 November 2002), pp. 467-472. by P. Brazhnik, A. Delafuente, P. Mendes posted to gene_regulation_network journal review sys_bio by joseph_x_zhou to the group bioNetwork_sysBio on 2008-12-24 19:27:10 as along with 1 person antonkratz
	Mathematical Modeling of Gene Networks [My Copy] Neuron, Vol. 26, No. 3. (June 2000), pp. 567-580. by P. Smolen posted to gene_netwok journal math_model by joseph_x_zhou to the group bioNetwork_sysBio on 2008-12-03 09:20:19 as along with 1 person antonkratz
	A fast, robust and tunable synthetic gene oscillator. [My Copy] Nature (29 October 2008) by Jesse Stricker, Scott Cookson, Matthew R R. Bennett, William H H. Mather, Lev S S. Tsimring, Jeff Hasty posted to gene_regulation_network journal oscillation synthesis_bio by joseph_x_zhou to the group bioNetwork_sysBio on 2008-11-28 16:53:05 as along with 12 people and 2 groups sbottani jasonpark1 austin margaritis lflorez stasaki stringertheory allysonlister yxue jbhiatt grahamc dbikard BP205 SynBioSys
	Qualitative network models and genome-wide expression data define carbon/nitrogen-responsive molecular machines in Arabidopsis [My Copy] Genome Biology, Vol. 8 (11 January 2007), R7. by Rodrigo A. Gutierrez, Laurence Lejay, Alexis Dean, Francesca Chiaromonte, Dennis E. Shasha, Gloria M. Coruzzi posted to gene_netwok journal qualitative_network by joseph_x_zhou to the group bioNetwork_sysBio on 2008-11-20 20:26:31 as along with 3 people kengg xwbcn natstreet
	Using a quantitative blueprint to reprogram the dynamics of the flagella gene network. [My Copy] Cell, Vol. 117, No. 6. (11 June 2004), pp. 713-720. by S. Kalir, U. Alon posted to cell_reprogram gene_netwok journal by joseph_x_zhou to the group bioNetwork_sysBio on 2008-11-20 19:33:30 as along with 3 people and 1 group dbikard comb adria TNT
	Metabolic gene regulation in a dynamically changing environment [My Copy] Nature, Vol. 454, No. 7208. (30 July 2008), pp. 1119-1122. by Matthew R. Bennett, Wyming L. Pang, Natalie A. Ostroff, et al.Bridget L. Baumgartner, Sujata Nayak, Lev S. Tsimring, Jeff Hasty posted to gene_regulation_network journal metabolic by joseph_x_zhou to the group bioNetwork_sysBio on 2008-11-18 20:34:39 as along with 10 people abhishek_tiwari boko4ikameto mmcclean guhjy emptyhb erel10 caseybrown bayesian klo margaritis

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