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Group: streptomyces - library [173 articles]

Recent papers posted by members of the streptomyces group
  • Metabolomic biomarkers: search, discovery and validation.
    Expert Rev Mol Diagn, Vol. 7, No. 4. (July 2007), pp. 329-333.
    by DB Kell
    posted to metabolomics by dbk to the group streptomyces on 2007-07-23 13:58:38 as ** along with 1 person and 1 group alanrw dbk-lab
  • Folksonomy as a Complex Network
    (23 Sep 2005)
    by Kaikai Shen, Lide Wu
  • Stimulus Specificity of Gene Expression Programs Determined by Temporal Control of IKK Activity
    Science, Vol. 309, No. 5742. (16 September 2005), pp. 1857-1861.
    by Shannon L Werner, Derren Barken, Alexander Hoffmann
    posted to nfkb by kell to the group streptomyces on 2005-09-16 17:12:32 as ** along with 1 person rklancer
  • On the Formation of Networks and Groups
    (2001)
    by B Dutta, M Jackson
    edited by B Dutta, M Jackson
  • Network dynamics and cell physiology.
    Nat Rev Mol Cell Biol, Vol. 2, No. 12. (December 2001), pp. 908-916.
    by JJ Tyson, K Chen, B Novak
  • Principles behind the multifarious control of signal transduction. ERK phosphorylation and kinase/phosphatase control.
    FEBS J, Vol. 272, No. 1. (January 2005), pp. 244-258.
    posted to network westerhoff by dbk to the group streptomyces on 2005-03-04 10:54:05 as ** along with 2 people and 1 group mrm knightjar dbk-lab
  • Open source software for the analysis of microarray data.
    Biotechniques, Vol. Suppl (March 2003), pp. 45-51.
  • Combining biological networks to predict genetic interactions.
    Proc Natl Acad Sci U S A, Vol. 101, No. 44. (2 November 2004), pp. 15682-15687.
    by SL Wong, LV Zhang, AH Tong, Z Li, DS Goldberg, OD King, G Lesage, M Vidal, B Andrews, H Bussey, C Boone, FP Roth
  • Emergence of complex dynamics in a simple model of signaling networks.
    Proc Natl Acad Sci U S A, Vol. 101, No. 44. (2 November 2004), pp. 15551-15555.
    posted to networks by dbk to the group streptomyces on 2005-02-27 22:51:19 as **** along with 1 person and 1 group camster dbk-lab
  • Functional cartography of complex metabolic networks
    Nature, Vol. 433, No. 7028. (24 February 2005), pp. 895-900.
    by Roger Guimera, LAN Luis
  • Inferring dynamic architecture of cellular networks using time series of gene expression, protein and metabolite data.
    Bioinformatics, Vol. 20, No. 12. (12 August 2004), pp. 1877-1886.
    posted to networks by dbk to the group streptomyces on 2005-02-19 16:12:39 as **** along with 4 people and 2 groups camster mrm wnpx smgomez dbk-lab GomezLab
  • Self-similarity of complex networks
    Nature, Vol. 433, No. 7024. (27 January 2005), pp. 392-395.
    by Chaoming Song, Shlomo Havlin, Hernan A Makse
  • What makes biochemical networks tick?
    Eur J Biochem, Vol. 271, No. 19. (October 2004), pp. 3877-3887.
    posted to sysbio by dbk to the group streptomyces on 2005-01-29 16:57:09 as ** along with 5 people and 1 group camster rklancer rmj001 mrm wnpx dbk-lab
  • Emergence of scaling in random networks
    (21 October 1999)
    by Albert-Laszlo Barabasi, Reka Albert
  • Fast iterative gene clustering based on information theoretic criteria for selecting the cluster structure.
    J Comput Biol, Vol. 11, No. 4. (2004), pp. 660-682.
    posted to clustering by dbk to the group streptomyces on 2004-12-28 10:11:42 along with 1 group dbk-lab
  • Biological robustness.
    Nat Rev Genet, Vol. 5, No. 11. (November 2004), pp. 826-837.
    by H Kitano
  • Network motifs in integrated cellular networks of transcription-regulation and protein-protein interaction.
    Proc Natl Acad Sci U S A, Vol. 101, No. 16. (20 April 2004), pp. 5934-5939.
  • Genetic networks with canalyzing Boolean rules are always stable.
    Proc Natl Acad Sci U S A (30 November 2004)
    by Stuart Kauffman, Carsten Peterson, Björn Samuelsson, Carl Troein
  • A proposed framework for the description of plant metabolomics experiments and their results
    Nature Biotechnology, Vol. 22, No. 12. (06 December 2004), 1601.
    by Helen Jenkins, Nigel Hardy, Manfred Beckmann, John Draper, Aileen R Smith, Janet Taylor, Oliver Fiehn, Royston Goodacre, Raoul J Bino, Robert Hall, Joachim Kopka, Geoffrey A Lane, Markus M Lange, Jang R Liu, Pedro Mendes, Basil J Nikolau, Stephen G Oliver, Norman W Paton, Sue Rhee, Ute Roessner-Tunali, Kazuki Saito, Jørn Smedsgaard, Lloyd W Sumner, Trevor Wang, Sean Walsh, Eve S Wurtele, Douglas B Kell
  • Network biology: understanding the cell's functional organization.
    Nat Rev Genet, Vol. 5, No. 2. (February 2004), pp. 101-113.
    by AL Barabási, ZN Oltvai
  • Machine Learning of Functional Class from Phenotype Data
    (2002)
    by A Clare, R King
    posted to ml by dbk to the group streptomyces on 2004-12-02 01:39:56 along with 2 people and 1 group irenas LeightonP dbk-lab
  • An efficient search algorithm to find the elementary circuits of a graph
    Commun. ACM, Vol. 13, No. 12. (December 1970), pp. 722-726.
    by James C Tiernan
  • PCR-targeted Streptomyces gene replacement identifies a protein domain needed for biosynthesis of the sesquiterpene soil odor geosmin.
    Proc Natl Acad Sci U S A, Vol. 100, No. 4. (18 February 2003), pp. 1541-1546.
    by B Gust, GL Challis, K Fowler, T Kieser, KF Chater
    posted to microbiology pcr-targeting streptomyces by bertoltgust to the group streptomyces on 2004-12-01 12:23:07
  • Streptomyces genetics: a genomic perspective
    Critical Reviews In Biotechnology, Vol. 23, No. 1. (2003), pp. 1-27.
    by Ashish Paradkar, Axel Trefzer, Rekha Chakraburtty, Diane Stassi
    posted to genomics streptomyces by claire2327 to the group streptomyces on 2004-12-01 10:30:48
  • The paralogous pairs of genes involved in clavulanic acid and clavam metabolite biosynthesis are differently regulated in Streptomyces clavuligerus
    Journal Of Bacteriology, Vol. 186, No. 18. (September 2004), pp. 6286-6297.
    by Kapil Tahlan, Cecilia Anders, Susan E Jensen
    posted to acid clavulanic clavuligerus streptomyces by claire2327 to the group streptomyces on 2004-12-01 10:27:58
  • Metabolic flux analysis for calcium dependent antibiotic (CDA) production in Streptomyces coelicolor
    Metabolic Engineering, Vol. 6, No. 4. (October 2004), pp. 313-325.
    by H Bum, Colin P Smith, Jason Micklefield, Ferda Mavituna
    posted to cda coelicolor mfa streptomyces by claire2327 to the group streptomyces on 2004-12-01 10:26:39
  • Use of genome-scale microbial models for metabolic engineering
    Current Opinion in Biotechnology, Vol. 15, No. 1. (February 2004), pp. 64-69.
    by Kiran R Patil, Mats Akesson, Jens Nielsen
  • An information-theoretic definition of similarity
    (1998), pp. 296-304.
    by Dekang Lin
  • A Fast Elitist Non-Dominated Sorting Genetic Algorithm for Multi-Objective Optimization: NSGA-II
    (2000), pp. 849-858.
    by Kalyanmoy Deb, Samir Agrawal, Amrit Pratab, T Meyarivan
    edited by Marc Schoenauer, Kalyanmoy Deb, Günter Rudolph, Xin Yao, Evelyne Lutton, JJ Merelo, Hans-Paul Schwefel
  • Microarrays of small molecules embedded in biodegradable polymers for use in mammalian cell-based screens.
    Proc Natl Acad Sci U S A, Vol. 101, No. 46. (16 November 2004), pp. 16144-16149.
    by SN Bailey, DM Sabatini, BR Stockwell
    posted to screening by dbk to the group streptomyces on 2004-11-30 10:52:32 along with 1 person and 1 group mdimmic dbk-lab
  • A deoxyribozyme-based molecular automaton.
    Nat Biotechnol, Vol. 21, No. 9. (September 2003), pp. 1069-1074.
  • Deoxyribozyme-based half-adder.
    J Am Chem Soc, Vol. 125, No. 22. (4 June 2003), pp. 6673-6676.
    posted to logic motifs networks by dbk to the group streptomyces on 2004-11-30 10:01:13 along with 1 person and 1 group stsaft dbk-lab
  • SMILES, a chemical language and information system. 1. introduction to methodology and encoding rules
    J. Chem. Inf. Comput. Sci., Vol. 28, No. 1. (February 1988), pp. 31-36.
    by David Weininger
    posted to smiles by dbk to the group streptomyces on 2004-11-29 21:24:58 along with 2 people and 1 group camster massivemayhem dbk-lab
  • Emergence of Complex Dynamics in a Simple Model of Signaling Networks
    (19 November 2004)
    by Luis A Amaral, Albert Diaz-Guilera, Andre A Moreira, Ary L Goldberger, Lewis A Lipsitz
  • Is designing mysterious? challenging the dual knowledge thesis
    Design Studies, Vol. 12, No. 3. (July 1991), pp. 124-131.
    by Richard Coyne, Adrian Snodgrass
    posted to design by dbk to the group streptomyces on 2004-11-23 23:48:57 along with 3 people and 1 group rabourn sourada J_Raff dbk-lab
  • Detection of multistability, bifurcations, and hysteresis in a large class of biological positive-feedback systems.
    Proc Natl Acad Sci U S A, Vol. 101, No. 7. (17 February 2004), pp. 1822-1827.
    by D Angeli, JE Ferrell, ED Sontag
    posted to motifs by dbk to the group streptomyces on 2004-11-23 23:46:42 along with 5 people and 1 group rklancer jyuh monod holan jbchang dbk-lab
  • Genomics in target and drug discovery.
    Biochem Soc Trans, Vol. 31, No. 2. (April 2003), pp. 429-432.
  • Approximating the Nondominated Front Using the Pareto Archived Evolution Strategy
    by Joshua DK Knowles, David Corne
    posted to ga by dbk to the group streptomyces on 2004-11-15 07:53:43 along with 1 group dbk-lab
  • AlgoVista
    by Christian Collberg, Stephen GK Kobourov, Suzanne Westbrook
  • Pre-eclampsia and cardiovascular disease: metabolic syndrome of pregnancy?
    Atherosclerosis, Vol. 175, No. 2. (August 2004), pp. 189-202.
    by VA Rodie, DJ Freeman, N Sattar, IA Greer
    posted to pe by dbk to the group streptomyces on 2004-11-14 21:06:27 along with 1 group dbk-lab
  • On the current-voltage relationships of energy-transducing membranes: phosphorylating membrane vesicles from Paracoccus denitrificans [proceedings]
    Biochem Soc Trans, Vol. 6, No. 6. (1978), pp. 1292-1295.
    by DB Kell, P John, SJ Ferguson
  • On the current-voltage relationships of energy-transducing membranes: submitochondrial particles [proceedings]
    Biochem Soc Trans, Vol. 6, No. 6. (1978), pp. 1301-1302.
    by MC Sorgato, SJ Ferguson, DB Kell
    posted to chemiosmosis coupling localised pmf by dbk to the group streptomyces on 2004-11-13 19:45:43 along with 1 group dbk-lab
  • Continuous monitoring of the electrical potential across energy-transducing membranes using ion-selective electrodes. Application to submitochondrial particles and chromatophores.
    FEBS Lett, Vol. 86, No. 2. (15 February 1978), pp. 294-298.
    by DB Kell, P John, MC Sorgato, SJ Ferguson
    posted to chemiosmosis methods pmf by dbk to the group streptomyces on 2004-11-13 19:45:24 along with 1 group dbk-lab
  • Measurement by a flow dialysis technique of the steady-state proton-motive force in chromatophores from Rhodospirillum rubrum. Comparison with phosphorylation potential.
    Biochim Biophys Acta, Vol. 502, No. 1. (11 April 1978), pp. 111-126.
    by DB Kell, SJ Ferguson, P John
    posted to chemiosmosis coupling localised pmf by dbk to the group streptomyces on 2004-11-13 19:44:58 along with 1 group dbk-lab
  • The protonmotive force in bovine heart submitochondrial particles. Magnitude, sites of generation and comparison with the phosphorylation potential.
    Biochem J, Vol. 174, No. 1. (15 July 1978), pp. 237-256.
    by MC Sorgato, SJ Ferguson, DB Kell, P John
    posted to chemiosmosis coupling localised pmf by dbk to the group streptomyces on 2004-11-13 19:44:42 along with 1 group dbk-lab
  • The protonmotive force in phosphorylating membrane vesicles from Paracoccus denitrificans. Magnitude, sites of generation and comparison with the phosphorylation potential.
    Biochem J, Vol. 174, No. 1. (15 July 1978), pp. 257-266.
    by DB Kell, P John, SJ Ferguson
    posted to chemiosmosis coupling localised pmf by dbk to the group streptomyces on 2004-11-13 19:44:25 along with 1 group dbk-lab
  • Evidence from 31P nuclear magnetic resonance that polyphosphate synthesis is a slip reaction in Paracoccus denitrificans [proceedings]
    Biochem Soc Trans, Vol. 7, No. 1. (February 1979), pp. 176-179.
    by SJ Ferguson, DG Gadian, DB Kell
  • Comparison of permeant ion uptake and carotenoid band shift as methods for determining the membrane potential in chromatophores from Rhodopseudomonas sphaeroides Ga.
    Biochem J, Vol. 180, No. 1. (15 April 1979), pp. 75-85.
    by SJ Ferguson, OT Jones, DB Kell, MC Sorgato
    posted to chemiosmosis coupling localised pmf polemics by dbk to the group streptomyces on 2004-11-13 19:43:07 along with 1 group dbk-lab
  • On the functional proton current pathway of electron transport phosphorylation. An electrodic view.
    Biochim Biophys Acta, Vol. 549, No. 1. (3 July 1979), pp. 55-99.
    by DB Kell
    posted to chemiosmosis coupling localised pmf polemics by dbk to the group streptomyces on 2004-11-13 19:42:50 along with 1 group dbk-lab
  • Comparative aspects of the energetics of oxidative phosphorylation in bacteria and mitochondria.
    Biochem Soc Trans, Vol. 7, No. 5. (October 1979), pp. 870-874.
    by SJ Ferguson, MC Sorgato, DB Kell, P John
    posted to chemiosmosis coupling localised pmf by dbk to the group streptomyces on 2004-11-13 19:42:26 along with 1 group dbk-lab
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