Group: iSEEM - with tag assembly [12 articles] Export

Recent papers posted by members of the iSEEM group with tag assembly

	Increasing the coverage of a metapopulation consensus genome by iterative read mapping and assembly [My Copy] Bioinformatics, Vol. 25, No. 21. (1 November 2009), pp. 2878-2881. by Bas E. Dutilh, Martijn A. Huynen, Marc Strous posted to assembly metagenomics methods population tiling by sharpton to the group iSEEM on 2009-07-03 23:29:03 as along with 7 people dakelley druvus kinestetika ThomasDOtto jasontsai skembel jmeppley
	A consistency-based consensus algorithm for de novo and reference-guided sequence assembly of short reads [My Copy] Bioinformatics, Vol. 25, No. 9. (1 May 2009), pp. 1118-1124. by Tobias Rausch, Sergey Koren, Gennady Denisov, et al.David Weese, Anne-Katrin Emde, Andreas Doring, Knut Reinert posted to assembly sequencing by djkt to the group iSEEM on 2009-04-24 22:53:27 as along with 19 people and 1 group jfr azazello hzoltan cthachuk GustavoLacerda jasontsai n00c nuin dakelley skembel Thaverkamp reyez TRHvidsten hpaces APRegier pengchy natstreet druvus darian Bioinformatics
	De novo fragment assembly with short mate-paired reads: Does the read length matter? [My Copy] Genome Research, Vol. 19, 336. by Mark J. Chaisson, Dumitru Brinza, Pavel A. Pevzner posted to assembly sequencing by djkt to the group iSEEM on 2009-02-10 00:36:23 as
	Species Synchrony and Its Drivers: Neutral and Nonneutral Community Dynamics in Fluctuating Environments [My Copy] American Naturalist (2008) by Michel Loreau, Claire de Mazancourt posted to assembly community neutral by jlgreen to the group iSEEM on 2008-08-04 20:15:48 as along with 1 person and 1 group anphony Green Lab
	Less lineages more trait variation: phylogenetically clustered plant communities are functionally more diverse [My Copy] Ecology Letters, Vol. 11, No. 8. (August 2008), pp. 809-819. by Prinzing, Andreas, Reiffers, et al. Reineke, Braakhekke, G. Wim, Hennekens, M. Stephan, Tackenberg, Oliver, Ozinga, A. Wim, Schaminee, H. J. Joop, Van Groenendael, M. Jan posted to assembly community diversity functional phylogenetics by jlgreen to the group iSEEM on 2008-08-04 20:03:09 as along with 1 person and 1 group anphony Green Lab
	The evolutionary ecology of metacommunities. [My Copy] Trends in ecology & evolution (Personal edition), Vol. 23, No. 6. (June 2008), pp. 311-317. by M. C. Urban, M. A. Leibold, P. Amarasekare, et al.L. De Meester, R. Gomulkiewicz, M. E. Hochberg, C. A. Klausmeier, N. Loeuille, C. de Mazancourt, J. Norberg, J. H. Pantel, S. Y. Strauss, M. Vellend, M. J. Wade posted to assembly community metacommunity review by jlgreen to the group iSEEM on 2008-08-04 19:54:56 as along with 4 people and 1 group maren anphony skumagai djkt Green Lab
	COMMUNITY ASSEMBLY IN THE PRESENCE OF DISTURBANCE: A MICROCOSM EXPERIMENT [My Copy] Ecology (2008) by Shivani N. Patel posted to assembly community by jlgreen to the group iSEEM on 2008-08-04 19:36:57 as along with 2 people and 1 group anphony danutter Green Lab
	PHYLOGENY, NICHES, AND RELATIVE ABUNDANCE IN NATURAL COMMUNITIES [My Copy] by Colleen K. Kelly, Michael G. Bowler, Oliver Pybus, Paul H. Harvey posted to assembly community neutral niche phylogenetics theory by jlgreen to the group iSEEM on 2008-07-27 23:24:45 as along with 1 group Green Lab
	Ecology: Return of the niche [My Copy] Nature, Vol. 454, No. 7200. (02 July 2008), pp. 39-41. by Mathew A. Leibold posted to assembly neutral niche by jlgreen to the group iSEEM on 2008-07-27 23:12:26 as along with 3 people and 2 groups anphony JLMC danutter Ecology Green Lab
	Use of simulated data sets to evaluate the fidelity of metagenomic processing methods. [My Copy] Nature methods, Vol. 4, No. 6. (29 June 2007), pp. 495-500. by Konstantinos Mavromatis, Natalia Ivanova, Kerrie Barry, et al.Harris Shapiro, Eugene Goltsman, Alice C. McHardy, Isidore Rigoutsos, Asaf Salamov, Frank Korzeniewski, Miriam Land, Alla Lapidus, Igor Grigoriev, Paul Richardson, Philip Hugenholtz, Nikos C. Kyrpides posted to assembly binning metagenomic methods otu ploscb08 simulation by jlgreen to the group iSEEM on 2008-07-25 23:27:12 as along with 17 people and 4 groups dutilh dakelley taylor73 sriesenfeld Thaverkamp skembel druvus Yanno oamg jmeppley bluto azazello GustavoLacerda carlk alexl mjetten djkt Glimcher_Lab Bioinformatics microbiology_nijmegen Green Lab
	The Human Microbiome Project [My Copy] Nature, Vol. 449, pp. 804-810. by Peter J. Turnbaugh, Ruth E. Ley, Micah Hamady, Claire M. Fraser-Liggett, Rob Knight, Jeffrey I. Gordon posted to assembly biogeography diversity microbiome ploscb08 review by jlgreen to the group iSEEM on 2008-07-25 21:05:09 as along with 1 person and 1 group djkt Green Lab
	Biogeography and Ecological Setting of Indian Ocean Hydrothermal Vents [My Copy] Science, Vol. 294, No. 5543. (26 October 2001), pp. 818-823. by C. L. Van Dover, S. E. Humphris, D. Fornari, et al.C. M. Cavanaugh, R. Collier, S. K. Goffredi, J. Hashimoto, M. D. Lilley, A. L. Reysenbach, T. M. Shank, K. L. Von Damm, A. Banta, R. M. Gallant, D. Gotz, D. Green, J. Hall, T. L. Harmer, L. A. Hurtado, P. Johnson, Z. P. Mckiness, C. Meredith, E. Olson, I. L. Pan, M. Turnipseed, Y. Won, Young, R. C. Vrijenhoek posted to 16s assembly biogeography by jlgreen to the group iSEEM on 2008-07-25 20:25:17 as along with 1 group Green Lab

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sequencing	89
genome	86
software	67
bioinformatics	61
454	57
review	44
structure	40
algorithm	39
solexa	39
genomics	38
short-reads	38
thesis	38
phage	36
next_generation	35
ngs	29
hiv	28
short-read	28
virus	28
capsid	27
alignment	25
theory	25
read	22
illumina	21
evolution	19
self	19
short	19
metagenomics	18
community	17
dna	17
bacteria	16
optical	16
method	15
protein	15
de-novo	14
est	14
focus	14
methods	14
complex	13
ht_sequencing	13
shortread	13
apobec	12
sequence	12
assembler	11
nanoparticles	11
wgs	11
2008	10
kinetics	10
rna	10
srs	10
tool	10
transcriptome	10
tweezers	10
ais	9
fragment	9
mapping	9
targeting	9
experiment	8
haplotype	8
nextgen	8
pressure	8
radiation	8
resequencing	8
shotgun	8
ankg	7
annotation	7
celera	7
de	7
de-bruijn	7
gag	7
novo	7
polymer	7
secretion	7
short-read-assembly	7
subassemblypaper	7
tandem-repeats	7
validation	7
vif	7
399	6
bacterial	6
dna_sequence_data	6
dynamics	6
ecology	6
molecular	6
nextgensequencing	6
parallel	6
pf454-paper	6
pilus	6
post-assembly	6
replication	6
scaffolding	6
trait	6
velvet	6
visualisation	6
arachne	5
fluorescence	5
hcv	5
hts	5
ploscb08	5
recombination	5
virulence	5

Group: iSEEM - with tag assembly [12 articles] Export

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