Group: iSEEM - with tag method [27 articles] Export

Recent papers posted by members of the iSEEM group with tag method

	Status of the Microbial Census [My Copy] Microbiol. Mol. Biol. Rev., Vol. 68, No. 4. (1 December 2004), pp. 686-691. by Patrick D. Schloss, Jo Handelsman posted to diversity method ploscb08 rarefaction review by jlgreen to the group iSEEM on 2008-08-08 23:51:10 as along with 3 people anphony mcox Olaf_Ilzins
	Viral population estimation using pyrosequencing. [My Copy] PLoS computational biology, Vol. 4, No. 4. (9 April 2008), e1000074. by Nicholas Eriksson, Lior Pachter, Yumi Mitsuya, et al.Soo-Yon Y. Rhee, Chunlin Wang, Baback Gharizadeh, Mostafa Ronaghi, Robert W. Shafer, Niko Beerenwinkel posted to diversity metagenomic method popgen virus by djkt to the group iSEEM on 2008-07-24 23:16:52 as along with 6 people and 1 group nfparrish ghattem jonilaserson hpaces jmeppley bmaust SIMR bioinformatics
	FastGroupII: A web-based bioinformatics platform for analyses of large 16S rDNA libraries [My Copy] BMC Bioinformatics, Vol. 7, No. 1. (2006) by Yanan Yu, Mya Breitbart, Pat Mcnairnie, Forest Rohwer posted to 16s method ploscb08 webtool by djkt to the group iSEEM on 2008-07-24 23:08:05 as
	Spatial scaling of microbial eukaryote diversity [My Copy] Nature, Vol. 432, No. 7018. (09 December 2004), pp. 747-750. by Jessica L. Green, Andrew J. Holmes, Mark Westoby, et al.Ian Oliver, David Briscoe, Mark Dangerfield, Michael Gillings, Andrew J. Beattie posted to biogeography empirical method ploscb08 by djkt to the group iSEEM on 2008-07-24 19:04:48 as along with 1 person fornstar
	The diversity and biogeography of soil bacterial communities. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 103, No. 3. (17 January 2006), pp. 626-631. by N. Fierer, R. B. Jackson posted to biogeography empirical method ploscb08 by djkt to the group iSEEM on 2008-07-24 19:03:48 as along with 3 people idoerg fornstar skembel
	Larger Islands House More Bacterial Taxa [My Copy] Science, Vol. 308, No. 5730. (24 June 2005), 1884. by Thomas Bell, Duane Ager, Ji-Inn Song, et al.Jonathan A. Newman, Ian P. Thompson, Andrew K. Lilley, Christopher J. van der Gast posted to biogeography empirical method ploscb08 by djkt to the group iSEEM on 2008-07-24 19:02:53 as
	A taxa-area relationship for bacteria [My Copy] Nature, Vol. 432, No. 7018. (09 December 2004), pp. 750-753. by M. Claire Horner-Devine, Melissa Lage, Jennifer B. Hughes, Brendan J. M. Bohannan posted to biogeography method ploscb08 by djkt to the group iSEEM on 2008-07-24 19:01:07 as along with 2 people liucun mcox
	The application of rarefaction techniques to molecular inventories of microbial diversity. [My Copy] Methods Enzymol, Vol. 397 (2005), pp. 292-308. by J. B. Hughes, J. J. Hellmann posted to diversity method ploscb08 by djkt to the group iSEEM on 2008-07-24 19:00:05 as along with 1 person rabu
	Quantitative and Qualitative beta Diversity Measures Lead to Different Insights into Factors That Structure Microbial Communities [My Copy] Appl. Environ. Microbiol., Vol. 73, No. 5. (1 March 2007), pp. 1576-1585. by Catherine A. Lozupone, Micah Hamady, Scott T. Kelley, Rob Knight posted to diversity method ploscb08 by djkt to the group iSEEM on 2008-07-24 18:59:15 as along with 2 people liucun Olaf_Ilzins
	An application of statistics to comparative metagenomics. [My Copy] BMC bioinformatics, Vol. 7, No. 1. (20 March 2006) by Beltran Rodriguez-Brito, Forest Rohwer, Robert A. Edwards posted to distance diversity metabolic metagenomic method ploscb08 by djkt to the group iSEEM on 2008-07-24 18:48:40 as along with 7 people taylor73 Thaverkamp jmeppley druvus knaseanka bluto carpi
	The marine viromes of four oceanic regions. [My Copy] PLoS Biol, Vol. 4, No. 11. (November 2006) by F. E. Angly, B. Felts, M. Breitbart, et al.P. Salamon, R. A. Edwards, C. Carlson, A. M. Chan, M. Haynes, S. Kelley, H. Liu, J. M. Mahaffy, J. E. Mueller, J. Nulton, R. Olson, R. Parsons, S. Rayhawk, C. A. Suttle, F. Rohwer posted to distance diversity empirical method ploscb08 virus by djkt to the group iSEEM on 2008-07-24 18:47:14 as along with 7 people hwright anphony azazello balicea bluto xingxu jlgreen
	$My PDF lozupone_06_unifrac.pdf$ UniFrac - An online tool for comparing microbial community diversity in a phylogenetic context [My Copy] BMC Bioinformatics, Vol. 7 (07 August 2006), 371. by Catherine Lozupone, Micah Hamady, Rob Knight posted to diversity method phylogenetics ploscb08 by djkt to the group iSEEM on 2008-07-24 18:45:57 as along with 3 people esyoun skembel mcox
	Phylogenetic Approaches for Describing and Comparing the Diversity of Microbial Communities [My Copy] Appl. Environ. Microbiol., Vol. 68, No. 8. (1 August 2002), pp. 3673-3682. by Andrew P. Martin posted to diversity method phylogenetics ploscb08 by djkt to the group iSEEM on 2008-07-24 18:45:14 as along with 8 people and 1 group hwright sharpton skembel sriesenfeld jmeppley Thaverkamp mcox Olaf_Ilzins Microbial-Ecology
	Testing for Differentiation of Microbial Communities Using Phylogenetic Methods: Accounting for Uncertainty of Phylogenetic Inference and Character State Mapping [My Copy] Microbial Ecology, Vol. 52, No. 3. (October 2006), pp. 408-417. by Jones, Ryan, Martin, Andrew posted to diversity method phylogenetics ploscb08 by djkt to the group iSEEM on 2008-07-24 18:44:28 as along with 1 person skembel
	Introducing TreeClimber, a test to compare microbial community structures. [My Copy] Applied and environmental microbiology, Vol. 72, No. 4. (April 2006), pp. 2379-2384. by P. D. Schloss, J. Handelsman posted to diversity method phylogenetics ploscb08 by djkt to the group iSEEM on 2008-07-24 18:42:36 as along with 2 people esyoun mcox
	Quantitative comparisons of 16S rRNA gene sequence libraries from environmental samples. [My Copy] Applied and environmental microbiology, Vol. 67, No. 9. (September 2001), pp. 4374-4376. by D. R. Singleton, M. A. Furlong, S. L. Rathbun, W. B. Whitman posted to 16s diversity ecology method ploscb08 by djkt to the group iSEEM on 2008-07-24 18:41:42 as along with 1 person mcox
	Integration of Microbial Ecology and Statistics: a Test To Compare Gene Libraries [My Copy] Appl. Environ. Microbiol., Vol. 70, No. 9. (1 September 2004), pp. 5485-5492. by Patrick D. Schloss, Bret R. Larget, Jo Handelsman posted to 16s diversity ecology method ploscb08 by djkt to the group iSEEM on 2008-07-24 18:39:53 as along with 2 people jmeppley mcox
	Introducing SONS, a tool for operational taxonomic unit-based comparisons of microbial community memberships and structures. [My Copy] Applied and environmental microbiology, Vol. 72, No. 10. (October 2006), pp. 6773-6779. by P. D. Schloss, J. Handelsman posted to 16s diversity metagenomic method phylogenetics ploscb08 by djkt to the group iSEEM on 2008-07-24 18:30:20 as along with 1 person sconlan
	Counting the Uncountable: Statistical Approaches to Estimating Microbial Diversity [My Copy] Appl. Environ. Microbiol., Vol. 67, No. 10. (1 October 2001), pp. 4399-4406. by Jennifer B. Hughes, Jessica J. Hellmann, Taylor H. Ricketts, Brendan J. Bohannan posted to diversity method ploscb08 review by djkt to the group iSEEM on 2008-07-24 18:27:30 as along with 6 people and 1 group jmeppley Stenuite andrewirwin vrich mcox Olaf_Ilzins Biological oceanography
	EzTaxon: a web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences. [My Copy] International journal of systematic and evolutionary microbiology, Vol. 57, No. Pt 10. (October 2007), pp. 2259-2261. by J. Chun, J. H. Lee, Y. Jung, et al.M. Kim, S. Kim, B. K. Kim, Y. W. Lim posted to 16s method ploscb08 webtool by djkt to the group iSEEM on 2008-07-24 18:25:58 as
	Alignment-independent bilinear multivariate modelling (AIBIMM) for global analyses of 16S rRNA gene phylogeny. [My Copy] Int J Syst Evol Microbiol, Vol. 56, No. Pt 7. (July 2006), pp. 1565-1575. by Knut Rudi, Monika Zimonja, Tormod Næs posted to 16s method phylogenetics by djkt to the group iSEEM on 2008-07-24 18:24:33 as along with 1 person Bevan_Weir
	FastGroup: a program to dereplicate libraries of 16S rDNA sequences. [My Copy] BMC bioinformatics, Vol. 2 (2001) by V. Seguritan, F. Rohwer posted to 16s alignment method ploscb08 by djkt to the group iSEEM on 2008-07-24 18:23:05 as
	Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richness. [My Copy] Applied and environmental microbiology, Vol. 71, No. 3. (March 2005), pp. 1501-1506. by P. D. Schloss, J. Handelsman posted to diversity method otu ploscb08 by djkt to the group iSEEM on 2008-07-24 18:21:56 as along with 4 people idoerg melissa_wos mcox sconlan
	NAST: a multiple sequence alignment server for comparative analysis of 16S rRNA genes [My Copy] Nucl. Acids Res., Vol. 34, No. suppl_2. (1 July 2006), pp. W394-399. by T. Z. Desantis, P. Hugenholtz, K. Keller, et al.E. L. Brodie, N. Larsen, Y. M. Piceno, R. Phan, G. L. Andersen posted to 16s alignment method ploscb08 webtool by djkt to the group iSEEM on 2008-07-24 18:20:03 as along with 5 people sim82 esyoun jmeppley nghoffma mcox
	An Automated Phylogenetic Tree-Based Small Subunit rRNA Taxonomy and Alignment Pipeline (STAP) [My Copy] PLoS ONE, Vol. 3, No. 7. (2 July 2008), e2566. by Dongying Wu, Amber Hartman, Naomi Ward, Jonathan A. Eisen posted to 16s alignment method phylogenetics ploscb08 by djkt to the group iSEEM on 2008-07-24 18:14:38 as along with 7 people and 3 groups Katje AaronDarling skembel sriesenfeld druvus vaulot skato_toyaku microbiology_nijmegen Papers recommended by the Roscoff Plankton Group Microbial-Ecology
	Bellerophon: a program to detect chimeric sequences in multiple sequence alignments [My Copy] Bioinformatics, Vol. 20, No. 14. (22 September 2004), pp. 2317-2319. by Thomas Huber, Geoffrey Faulkner, Philip Hugenholtz posted to alignment chimera method by djkt to the group iSEEM on 2008-07-24 18:12:09 as along with 3 people ajsferreira esyoun mcox
	Viral Population Estimation Using Pyrosequencing [My Copy] posted to 16s diversity metagenomic method ploscb08 popgen sequencing virus by djkt to the group iSEEM on 2008-07-24 17:37:55 as

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Group: iSEEM - with tag method [27 articles] Export

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