Group: iSEEM - with tag otu [17 articles] Export

Recent papers posted by members of the iSEEM group with tag otu

	Prokaryotic Genomes and Diversity in Surface Ocean Waters: Interrogating the Global Ocean Sampling Metagenome [My Copy] Appl. Environ. Microbiol., Vol. 75, No. 7. (1 April 2009), pp. 2221-2229. by Erin J. Biers, Shulei Sun, Erinn C. Howard posted to otu metagenomics gos 16s by skembel to the group iSEEM on 2009-11-18 22:17:14 as along with 2 people Thaverkamp EKotlarska
	Community-wide analysis of microbial genome sequence signatures [My Copy] Genome Biology, Vol. 10, No. 8. (2009), R85. by Gregory J. Dick, Anders F. Andersson, Brett J. Baker, et al.Sheri L. Simmons, Brian C. Thomas, A. Pepper Yelton, Jillian F. Banfield posted to otu microbes metagenomics community by djkt to the group iSEEM on 2009-09-02 23:52:48 as along with 8 people and 1 group ajsferreira dakelley druvus bdessailly skembel jonilaserson neils barriot Orengo Group Journal Picks
	Phymm and PhymmBL: metagenomic phylogenetic classification with interpolated Markov models [My Copy] Nature Methods, Vol. 6, No. 9. (02 August 2009), pp. 673-676. by Arthur Brady, Steven L. Salzberg posted to otu metagenomics imm classification binning by sharpton to the group iSEEM on 2009-08-25 22:59:51 as along with 8 people and 3 groups idoerg azazello robertrentzsch dakelley skembel Thaverkamp jbhiatt stajich Orengo Group Journal Picks Journal picks Mycology
	Accurate determination of microbial diversity from 454 pyrosequencing data. [My Copy] Nature methods, Vol. 6, No. 9. (09 September 2009), pp. 639-641. by Christopher Quince, Anders Lanzén, Thomas P. Curtis, et al.Russell J. Davenport, Neil Hall, Ian M. Head, L. Fiona Read, William T. Sloan posted to otu diversity 454 by skembel to the group iSEEM on 2009-08-21 22:29:55 as along with 7 people and 1 group halinat kinestetika jgill jonilaserson druvus orzenil danmaclean Bioinformatics
	SOrt-ITEMS: Sequence orthology based approach for improved taxonomic estimation of metagenomic sequences [My Copy] Bioinformatics, Vol. 25, No. 14. (15 July 2009), pp. 1722-1730. by M. Monzoorul Haque, Tarini S. Ghosh, Dinakar Komanduri, Sharmila S. Mande posted to binning metagenomics otu phylogenetics by djkt to the group iSEEM on 2009-07-02 19:02:47 as along with 5 people dakelley sharpton sriesenfeld guhjy operon
	Microbial community profiling for human microbiome projects: Tools, techniques, and challenges [My Copy] Genome Research, Vol. 19, No. 7. (21 July 2009), pp. 1141-1152. by Micah Hamady, Rob Knight posted to 16s clustering human methods microbiome otu review by djkt to the group iSEEM on 2009-07-01 22:03:21 as along with 6 people and 1 group jbhiatt dakelley skembel sharpton ppgardne neils Journal picks
	The convergence of carbohydrate active gene repertoires in human gut microbes [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 39. (30 September 2008), pp. 15076-15081. by Catherine A. Lozupone, Micah Hamady, Brandi L. Cantarel, et al.Pedro M. Coutinho, Bernard Henrissat, Jeffrey I. Gordon, Rob Knight posted to human metabolic metagenomics microbes microbiome otu by djkt to the group iSEEM on 2009-04-22 19:27:33 as along with 5 people cmzmasek sharpton Thaverkamp skembel sg45653
	Exploring Microbial Diversity and Taxonomy Using SSU rRNA Hypervariable Tag Sequencing [My Copy] PLoS Genet, Vol. 4, No. 11. (21 November 2008), e1000255. by Susan M. Huse, Les Dethlefsen, Julie A. Huber, David M. Welch, David A. Relman, Mitchell L. Sogin posted to 16s metagenomics otu phylogenetics sequencing by djkt to the group iSEEM on 2008-11-22 01:24:16 as along with 4 people and 1 group Huub_odc azazello sconlan skembel microbiology_nijmegen
	mlstdbNet - distributed multi-locus sequence typing (MLST) databases [My Copy] BMC Bioinformatics, Vol. 5, No. 1. (1 July 2004), 86. by Keith Jolley, Man S. Chan, Martin Maiden posted to database mlst otu by djkt to the group iSEEM on 2008-10-23 22:05:34 as along with 1 person katholt
	Nucleotide sequence-based typing of bacteria and the impact of automation. [My Copy] BioEssays : news and reviews in molecular, cellular and developmental biology, Vol. 24, No. 9. (September 2002), pp. 858-862. by S. C. Clarke posted to database mlst otu by djkt to the group iSEEM on 2008-10-23 22:04:12 as
	Database-driven multi locus sequence typing (MLST) of bacterial pathogens. [My Copy] Bioinformatics (Oxford, England), Vol. 17, No. 11. (November 2001), pp. 1077-1083. by M. S. Chan, M. C. Maiden, B. G. Spratt posted to database mlst otu phylogenetics by djkt to the group iSEEM on 2008-10-23 22:02:44 as
	MEGAN analysis of metagenomic data [My Copy] Genome Research, Vol. 17, No. 3., 377. by Huson posted to diversity otu phylogenetics by djkt to the group iSEEM on 2008-09-17 19:00:57 as
	CompostBin: A DNA composition-based algorithm for binning environmental shotgun reads [My Copy] ArXiv e-prints, Vol. 708 (August 2007) by S. Chatterji, I. Yamazaki, Z. Bai, J. Eisen posted to otu by djkt to the group iSEEM on 2008-09-17 18:57:49 as along with 1 person azazello
	Binning sequences using very sparse labels within a metagenome [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (28 April 2008), 215. by Chon K. Chan, Arthur Hsu, Saman Halgamuge, Sen L. Tang posted to binning metagenomic otu ploscb08 by jlgreen to the group iSEEM on 2008-08-15 04:37:39 as along with 14 people and 2 groups ajsferreira skembel esyoun sriesenfeld jmeppley dakelley Thaverkamp idoerg azazello druvus alexl mjetten werwiesel djkt Bioinformatics microbiology_nijmegen
	Use of simulated data sets to evaluate the fidelity of metagenomic processing methods. [My Copy] Nature methods, Vol. 4, No. 6. (29 June 2007), pp. 495-500. by Konstantinos Mavromatis, Natalia Ivanova, Kerrie Barry, et al.Harris Shapiro, Eugene Goltsman, Alice C. McHardy, Isidore Rigoutsos, Asaf Salamov, Frank Korzeniewski, Miriam Land, Alla Lapidus, Igor Grigoriev, Paul Richardson, Philip Hugenholtz, Nikos C. Kyrpides posted to assembly binning metagenomic methods otu ploscb08 simulation by jlgreen to the group iSEEM on 2008-07-25 23:27:12 as along with 16 people and 4 groups dakelley taylor73 sriesenfeld Thaverkamp skembel druvus Yanno oamg jmeppley bluto azazello GustavoLacerda carlk alexl mjetten djkt Glimcher_Lab Bioinformatics microbiology_nijmegen Green Lab
	Investigations of Oligonucleotide Usage Variance Within and Between Prokaryotes [My Copy] PLoS Comput Biol, Vol. 4, No. 4. (18 April 2008), e1000057. by Jon Bohlin, Eystein Skjerve, David W. Ussery posted to metagenomic otu by djkt to the group iSEEM on 2008-07-24 23:12:46 as along with 3 people and 1 group michaelbarton treangen jlgreen Green Lab
	Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richness. [My Copy] Applied and environmental microbiology, Vol. 71, No. 3. (March 2005), pp. 1501-1506. by P. D. Schloss, J. Handelsman posted to diversity method otu ploscb08 by djkt to the group iSEEM on 2008-07-24 18:21:56 as along with 4 people idoerg melissa_wos mcox sconlan

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metagenomics	7
binning	5
16s	4
database	3
diversity	3
metagenomic	3
mlst	3
phylogenetics	3
ploscb08	3
454	2
classification	2
clustering	2
human	2
imm	2
methods	2
microbes	2
microbiome	2
algorithm	1
assembly	1
bacteria	1
community	1
gos	1
metabolic	1
method	1
phylogeny	1
review	1
sequencing	1
simulation	1
species	1

Group: iSEEM - with tag otu [17 articles] Export

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