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Group: EisenLab - with tag rate [14 articles]

Recent papers posted by members of the EisenLab group with tag rate
  • Conserved noncoding sequences are selectively constrained and not mutation cold spots
    Nature Genetics, Vol. 38, No. 2. (25 December 2005), pp. 223-227.
    by Jared A Drake, Christine Bird, James Nemesh, Daryl J Thomas, Christopher Newton-Cheh, Alexandre Reymond, Laurent Excoffier, Homa Attar, Stylianos E Antonarakis, Emmanouil T Dermitzakis, Joel N Hirschhorn
    posted to rate non-coding mutation dermitzakis conserved cold-spot by Stew to the group EisenLab on 2007-07-29 22:06:38 as read along with 5 people and 1 group aprasad ccots ashandanj cisevol bpcusack cis-regulatory-evolution
  • Life cycle transcriptome of the malaria mosquito Anopheles gambiae and comparison with the fruitfly Drosophila melanogaster
    PNAS (11 June 2007), 0703988104.
    by Anastasios C Koutsos, Claudia Blass, Stephan Meister, Sabine Schmidt, Robert M Maccallum, Marcelo B Soares, Frank H Collins, Vladimir Benes, Evgeny Zdobnov, Fotis C Kafatos, George K Christophides
    posted to round_robin regulatory_evolution rate insect expression_divergence eisen_journal_club drosophila dan_presented array by dpollard to the group EisenLab on 2007-06-29 05:48:18 as *** along with 2 people cjeans george_g
  • Direct estimation of per nucleotide and genomic deleterious mutation rates in Drosophila
    Nature, Vol. 445, No. 7123. (4 January 2007), pp. 82-85.
    by Cathy Haag-Liautard, Mark Dorris, Xulio Maside, Steven Macaskill, Daniel L Halligan, Brian Charlesworth, Peter D Keightley
    posted to rate mutation fitness drosophila by dpollard to the group EisenLab on 2007-04-02 22:14:32 as *** along with 6 people operon jri stajich ramensky lusk gjuggler
  • Consistent Patterns of Rate Asymmetry and Gene Loss Indicate Widespread Neofunctionalization of Yeast Genes After Whole-Genome Duplication
    Genetics, Vol. 175, No. 3. (1 March 2007), pp. 1341-1350.
    by Kevin P Byrne, Kenneth H Wolfe
    posted to variation turnover rate genome gene duplication by dpollard to the group EisenLab on 2007-03-26 08:01:28 as ** along with 3 people gjuggler echinotrix stajich
  • Assessing the Determinants of Evolutionary Rates in the Presence of Noise.
    Mol Biol Evol (7 March 2007)
    by Joshua B B Plotkin, Hunter B B Fraser
    posted to rate protein evolution by dpollard to the group EisenLab on 2007-03-22 23:50:17 as ** along with 2 people Garamonfok bpcusack
  • Estimating the Neutral Rate of Nucleotide Substitution Using Introns.
    Mol Biol Evol (22 November 2006)
    by Michael M M Hoffman, Ewan Birney
    posted to evolution neutral rate by dpollard to the group EisenLab on 2006-12-01 23:24:04 as ****
  • Position specific variation in the rate of evolution in transcription factor binding sites.
    BMC Evol Biol, Vol. 3, No. 1. (28 August 2003)
    by AM Moses, DY Chiang, M Kellis, ES Lander, MB Eisen
    posted to binding conserved constraint evolution noncoding pattern phylogeny prediction pwm rate selection specific transcription by dpollard to the group EisenLab on 2006-11-07 00:22:07 as read along with 6 people and 1 group briann adepace lusk nklee cisevol emptyhb cis-regulatory-evolution
  • Observations of Amino Acid Gain and Loss During Protein Evolution are Explained by Statistical Bias.
    Mol Biol Evol (11 May 2006)
    by Richard A A Goldstein, David D D Pollock
    posted to acid amino evolution rate by dpollard to the group EisenLab on 2006-06-13 18:55:46 as ** along with 1 person RMGraze
  • Evaluating phylogenetic footprinting for human-rodent comparisons.
    Bioinformatics, Vol. 22, No. 4. (15 February 2006), pp. 430-437.
    by T Sauer, E Shelest, E Wingender
    posted to alignment binding conserved evolution mammal motif rate transcription vertebrate by dpollard to the group EisenLab on 2006-05-01 22:45:46 as **
  • Rates and patterns of chromosomal evolution in Drosophila pseudoobscura and D. miranda.
    Genetics (17 March 2006)
    by Carolina Bartolome, Brian Charlesworth
    posted to drosophila evolution genomic inversion rate by dpollard to the group EisenLab on 2006-04-02 23:03:09 as ** along with 2 people operon jri
  • Strong region-specific heterogeneity in base composition evolution on the Drosophila X chromosome.
    Genetics (17 March 2006)
    by Wen-Ya Y Ko, Shengfu Piao, Hiroshi Akashi
    posted to base composition drosophila evolution gene nonstationary rate reconstruction tree variation by dpollard to the group EisenLab on 2006-03-31 23:50:30 as *****
  • Genes involved in complex adaptive processes tend to have highly conserved upstream regions in mammalian genomes.
    BMC Genomics, Vol. 6 (27 November 2005)
    by S Lee, I Kohane, S Kasif
    posted to conserved development expression gene intergenic noncoding rate by dpollard to the group EisenLab on 2006-03-21 20:26:29 as ** along with 2 people balicea Garamonfok
  • Low Rates of Expression-Profile Divergence in Highly-Expressed Genes and Tissue-Specific Genes During Mammalian Evolution.
    Mol Biol Evol (6 March 2006)
    by Ben-Yang Y Liao, Jianzhi Zhang
    posted to evolution expression gene mammal rate by dpollard to the group EisenLab on 2006-03-21 18:59:02 as *** along with 5 people dragonrez aprasad djkt cjeans emarker
  • PLoS Computational Biology: Differentiating Positive Selection from Acceleration and Relaxation in Human and Chimp
    posted to adaptive evolution gene rate variation by dpollard to the group EisenLab on 2006-03-17 20:59:12 as **
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