Group: Bioinformatics - with tag 0500 [40 articles] Export

Recent papers posted by members of the Bioinformatics group with tag 0500

	A non-EST-based method for exon-skipping prediction [My Copy] Genome Res, Vol. 14, No. 8. (Aug 2004), pp. 1617-1623. by R. Sorek, R. Shemesh, Y. Cohen, O. Basechess, G. Ast, R. Shamir posted to 0500 20040924 acid alternative animals biologymethods comparative computational databases exons expressed genetic genome human humans introns messengergenetics mice models nucleic rna sequence splicing study tags by kaspermunch to the group Bioinformatics on 2006-11-02 10:09:02 as
	Genome-wide survey of human alternative pre-mRNA splicing with exon junction microarrays [My Copy] Science, Vol. 302, No. 5653. (Dec 2003), pp. 2141-2144. by J. M. Johnson, J. Castle, Garrett P. Engele, et al.Z. Kan, P. M. Loerch, C. D. Armour, R. Santos, E. E. Schadt, R. Stoughton, D. D. Shoemaker posted to 0500 20040107 alternative amyloid analysis array beta-protein cell chain coa complementary curve data distribution dna exons expressed genome human humans hydrolases hydroxymethylglutaryl isoformsanalysis line molecular monoester oligonucleotide phosphoric polymerase precursoranalysisgenetics precursorsgenetics protein proteinsanalysisgenetics reaction reductasesanalysisgenetics reverse rna roc sequence splicing tags tissue transcriptase by kaspermunch to the group Bioinformatics on 2006-11-02 10:09:00 as
	Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice [My Copy] Science, Vol. 301, No. 5631. (Jul 2003), pp. 376-379. by S. Kikuchi, K. Satoh, T. Nagata, et al.N. Kawagashira, K. Doi, N. Kishimoto, J. Yazaki, M. Ishikawa, H. Yamada, H. Ooka, I. Hotta, K. Kojima, T. Namiki, E. Ohneda, W. Yahagi, K. Suzuki, C. J. Li, K. Ohtsuki, T. Shishiki, Y. Otomo, K. Murakami, Y. Iida, S. Sugano, T. Fujimura, Y. Suzuki, Y. Tsunoda, T. Kurosaki, T. Kodama, H. Masuda, M. Kobayashi, Q. Xie, M. Lu, R. Narikawa, A. Sugiyama, K. Mizuno, S. Yokomizo, J. Niikura, R. Ikeda, J. Ishibiki, M. Kawamata, A. Yoshimura, J. Miura, T. Kusumegi, M. Oka, R. Ryu, M. Ueda, K. Matsubara, J. Kawai, P. Carninci, J. Adachi, K. Aizawa, T. Arakawa, S. Fukuda, A. Hara, W. Hashizume, N. Hayatsu, K. Imotani, Y. Ishii, M. Itoh, I. Kagawa, S. Kondo, H. Konno, A. Miyazaki, N. Osato, Y. Ota, R. Saito, D. Sasaki, K. Sato, K. Shibata, A. Shinagawa, T. Shiraki, M. Yoshino, Y. Hayashizaki, A. Yasunishi posted to 0500 20030802 acid alternative amino analysis antisensegenetics biology cloning complementary computational data databases dna factorschemistrygenetics frames genes genetic genome govt homology molecular non-us nucleic open oryza plant protein proteinschemistrygeneticsphysiology reading research rna sativagenetics sequence splicing structure support tertiary transcription by kaspermunch to the group Bioinformatics on 2006-11-02 10:09:00 as
	Impact of alternative initiation, splicing, and termination on the diversity of the mRNA transcripts encoded by the mouse transcriptome [My Copy] Genome Res, Vol. 13, No. 6B. (Jun 2003), pp. 1290-1300. by M. Zavolan, S. Kondo, C. Schonbach, et al.J. Adachi, D. A. Hume, Y. Hayashizaki, T. Gaasterland posted to 0500 20030812 alternative analysis animals biologymethodsstatistics cluster comparative computational data databases exonsgenetics genes geneticgenetics geneticsgeneticsphysiology geneticstatistics genome govt initiation messengergeneticsphysiology mice non-phs non-us numerical phs polypyrimidine proteingenetics proteomegenetics research rna sitephysiology sitesgenetics splice splicinggenetics splicinggeneticsphysiology structuralgeneticsphysiology study support tract-binding transcription us variation by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:59 as
	Computational comparative analyses of alternative splicing regulation using full-length cDNA of various eukaryotes [My Copy] RNA, Vol. 10, No. 7. (Jul 2004), pp. 1005-1018. by H. Itoh, T. Washio, M. Tomita posted to 0500 20040824 acid alternative animals base complementarygenetics conserved data dna drosophila evolution exonsgenetics govt humans intronsgenetics melanogastergenetics mice molecular non-us nucleic oryza regulatory research sativagenetics sequence sequences species specificity splicinggenetics support by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:57 as
	C. elegans ORFeome version 1.1: experimental verification of the genome annotation and resource for proteome-scale protein expression [My Copy] Nat Genet, Vol. 34, No. 1. (May 2003), pp. 35-41. by J. Reboul, P. Vaglio, J. F. Rual, et al.P. Lamesch, M. Martinez, C. M. Armstrong, S. Li, L. Jacotot, N. Bertin, R. Janky, T. Moore, Hudson, J. L. Hartley, M. A. Brasch, J. Vandenhaute, S. Boulton, G. A. Endress, S. Jenna, E. Chevet, V. Papasotiropoulos, P. P. Tolias, J. Ptacek, M. Snyder, R. Huang, M. R. Chance, H. Lee, Doucette L. Stamm, D. E. Hill, M. Vidal posted to 0500 20030528 alternative animals caenorhabditis cloning complementarygenetics databases dna elegansgenetics exons expressed expression frames gene genes genetic genome genomics govt helminth helminthgenetics humans introns molecular non-us open phs proteinsgenetics proteome proteomics reading research sequence splicing support tags us by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:54 as
	How prevalent is functional alternative splicing in the human genome? [My Copy] Trends Genet, Vol. 20, No. 2. (Feb 2004), pp. 68-71. by R. Sorek, R. Shamir, G. Ast posted to 0500 20040310 alternative comparative evolution exons expressed genetic genome human humans introns models molecular rna sequence sites splice splicinggenetics study tags by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:53 as
	The transcriptional activity of human Chromosome 22 [My Copy] Genes Dev, Vol. 17, No. 4. (Feb 2003), pp. 529-540. by J. L. Rinn, G. Euskirchen, P. Bertone, et al.R. Martone, N. M. Luscombe, S. Hartman, P. M. Harrison, F. K. Nelson, P. Miller, M. Gerstein, S. Weissman, M. Snyder posted to 0500 20030328 22 a acid amino analysis animals array chromosomes conserved data databases female genetic govt human humans internet introns mice molecular non-us oligonucleotide pair phs placentaphysiology poly research sequence support transcription us by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:51 as
	Complete sequencing and characterization of 21,243 full-length human cDNAs [My Copy] Nat Genet, Vol. 36, No. 1. (Jan 2004), pp. 40-45. by T. Ota, Y. Suzuki, T. Nishikawa, et al.T. Otsuki, T. Sugiyama, R. Irie, A. Wakamatsu, K. Hayashi, H. Sato, K. Nagai, K. Kimura, H. Makita, M. Sekine, M. Obayashi, T. Nishi, T. Shibahara, T. Tanaka, S. Ishii, J. Yamamoto, K. Saito, Y. Kawai, Y. Isono, Y. Nakamura, K. Nagahari, K. Murakami, T. Yasuda, T. Iwayanagi, M. Wagatsuma, A. Shiratori, H. Sudo, T. Hosoiri, Y. Kaku, H. Kodaira, H. Kondo, M. Sugawara, M. Takahashi, K. Kanda, T. Yokoi, T. Furuya, E. Kikkawa, Y. Omura, K. Abe, K. Kamihara, N. Katsuta, K. Sato, M. Tanikawa, M. Yamazaki, K. Ninomiya, T. Ishibashi, H. Yamashita, K. Murakawa, K. Fujimori, H. Tanai, M. Kimata, M. Watanabe, S. Hiraoka, Y. Chiba, S. Ishida, Y. Ono, S. Takiguchi, S. Watanabe, M. Yosida, T. Hotuta, J. Kusano, K. Kanehori, Takahashi A. Fujii, H. Hara, T. O. Tanase, Y. Nomura, S. Togiya, F. Komai, R. Hara, K. Takeuchi, M. Arita, N. Imose, K. Musashino, H. Yuuki, A. Oshima, N. Sasaki, S. Aotsuka, Y. Yoshikawa, H. Matsunawa, T. Ichihara, N. Shiohata, S. Sano, S. Moriya, H. Momiyama, N. Satoh, S. Takami, Y. Terashima, O. Suzuki, S. Nakagawa, A. Senoh, H. Mizoguchi, Y. Goto, F. Shimizu, H. Wakebe, H. Hishigaki, T. Watanabe, A. Sugiyama, M. Takemoto, B. Kawakami, M. Yamazaki, K. Watanabe, A. Kumagai, S. Itakura, Y. Fukuzumi, Y. Fujimori, M. Komiyama, H. Tashiro, A. Tanigami, T. Fujiwara, T. Ono, K. Yamada, Y. Fujii, K. Ozaki, M. Hirao, Y. Ohmori, A. Kawabata, T. Hikiji, N. Kobatake, H. Inagaki, Y. Ikema, S. Okamoto, R. Okitani, T. Kawakami, S. Noguchi, T. Itoh, K. Shigeta, T. Senba, K. Matsumura, Y. Nakajima, T. Mizuno, M. Morinaga, M. Sasaki, T. Togashi, M. Oyama, H. Hata, M. Watanabe, T. Komatsu, Mizushima J. Sugano, T. Satoh, Y. Shirai, Y. Takahashi, K. Nakagawa, K. Okumura, T. Nagase, N. Nomura, H. Kikuchi, Y. Masuho, R. Yamashita, K. Nakai, T. Yada, Y. Nakamura, O. Ohara, T. Isogai, S. Sugano posted to 0500 20 20040203 21-22 analysis and biology chromosomes comparative complementary computational dna frames govt human humans messenger non-us open pair reading research rna sequence study support y by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:50 as
	Empirical analysis of transcriptional activity in the Arabidopsis genome [My Copy] Science, Vol. 302, No. 5646. (Oct 2003), pp. 842-846. by K. Yamada, J. Lim, J. M. Dale, et al.H. Chen, P. Shinn, C. J. Palm, A. M. Southwick, H. C. Wu, C. Kim, M. Nguyen, P. Pham, R. Cheuk, Karlin G. Newmann, S. X. Liu, B. Lam, H. Sakano, T. Wu, G. Yu, M. Miranda, H. L. Quach, M. Tripp, C. H. Chang, J. M. Lee, M. Toriumi, M. M. Chan, C. C. Tang, C. S. Onodera, J. M. Deng, K. Akiyama, Y. Ansari, T. Arakawa, J. Banh, F. Banno, L. Bowser, S. Brooks, P. Carninci, Q. Chao, N. Choy, A. Enju, A. D. Goldsmith, M. Gurjal, N. F. Hansen, Y. Hayashizaki, Johnson C. Hopson, V. W. Hsuan, K. Iida, M. Karnes, S. Khan, E. Koesema, J. Ishida, P. X. Jiang, T. Jones, J. Kawai, A. Kamiya, C. Meyers, M. Nakajima, M. Narusaka, M. Seki, T. Sakurai, M. Satou, R. Tamse, M. Vaysberg, E. K. Wallender, C. Wong, Y. Yamamura, S. Yuan, K. Shinozaki, R. W. Davis, A. Theologis, J. R. Ecker posted to 0500 20031210 acid analysis arabidopsisgenetics array biology chain chromosome chromosomes cloning complementarygenetics computational dna expressed expression frames gene genes genetic genome genomics govt hybridization intergenic mapping messengergenetics molecular non-phs non-us nucleic oligonucleotide open plant plantgenetics polymerase profiling reaction reading research reverse rna sequence support tags transcriptase transcription us by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:49 as
	Novel RNAs identified from an in-depth analysis of the transcriptome of human chromosomes 21 and 22 [My Copy] Genome Res, Vol. 14, No. 3. (Mar 2004), pp. 331-342. by D. Kampa, J. Cheng, P. Kapranov, et al.M. Yamanaka, S. Brubaker, S. Cawley, J. Drenkow, A. Piccolboni, S. Bekiranov, G. Helt, H. Tammana, T. R. Gingeras posted to 0500 20040318 21genetics 22genetics analysismethods array cell cellschemistrymetabolism chromosome chromosomes data dna expression gene genes geneticgenetics govt human humans jurkat line mappingmethods messengergenetics molecular neoplasmgenetics non-us oligonucleotide pair phs probesgenetics profilingmethods research rna rnagenetics sequence structural structuralgenetics support transcription tumor us by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:48 as
	The microRNA Registry [My Copy] Nucleic Acids Res, Vol. 32, No. Database issue. (Jan 2004), pp. D109-D111. by Griffiths S. Jones posted to 0500 20040121 acid animals base biology computational conformation databases humans internet micrornaschemistrygenetics nucleic registries sequence by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:39 as
	Patterns of evolutionary constraints in intronic and intergenic DNA of Drosophila [My Copy] Genome Res, Vol. 14, No. 2. (Feb 2004), pp. 273-279. by D. L. Halligan, Eyre A. Walker, P. Andolfatto, P. D. Keightley posted to 0500 20040318 alignmentmethodsstatistics animals carlo comparative conserved data dna drosophila drosophilagenetics evolution frequencygenetics gene intergenicgenetics intronsgenetics melanogastergenetics method models molecular monte numerical sequence sequencegenetics statistical study by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:30 as
	GlimmerM, Exonomy and Unveil: three ab initio eukaryotic genefinders [My Copy] Nucleic Acids Res, Vol. 31, No. 13. (Jul 2003), pp. 3601-3604. by W. H. Majoros, M. Pertea, C. Antonescu, S. L. Salzberg posted to 0500 20030819 analysis arabidopsisgenetics cells chains dnamethods eukaryotic exons genes govt internet introns markov non-phs phs plant research sequence software support us by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:21 as
	SLAM: cross-species gene finding and alignment with a generalized pair hidden Markov model [My Copy] Genome Res, Vol. 13, No. 3. (Mar 2003), pp. 496-502. by M. Alexandersson, S. Cawley, L. Pachter posted to 0500 20030412 alignmentmethodsstatistics animals biologymethodsstatistics chains comparative computational conserved data design dna dnagenetics falciparumgenetics genes govt humans markov mice numerical phs plasmodium protozoangenetics research sequence sequencegenetics software species specificity structural structuralgenetics study support us vivaxgenetics by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:19 as
	Evaluation of gene-finding algorithms by a content-balancing accuracy index [My Copy] J Biomol Struct Dyn, Vol. 19, No. 6. (Jun 2002), pp. 1045-1052. by C. T. Zhang, R. Zhang posted to 0500 20030820 algorithms biology chromosome computational genes govt mapping non-us research support by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:07 as
	Eval: a software package for analysis of genome annotations [My Copy] BMC Bioinformatics, Vol. 4, No. 1. (Oct 2003) by E. Keibler, M. R. Brent posted to 0500 20040724 biologystandardsstatistics comparative computational computer data genome govt graphicsstandardsstatistics non-phs numerical phs research softwareclassification study support us by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:02 as
	EasyGene--a prokaryotic gene finder that ranks ORFs by statistical significance [My Copy] BMC Bioinformatics, Vol. 4, No. 1. (Jun 2003) by T. S. Larsen, A. Krogh posted to non-us numerical 20031206 and bacillus bacterial bacterialgenetics binding biologymethodsstatistics chains coli coligenetics comparative computational data escherichia framesgenetics genes genetic genome govt helicobacter markov models mycobacterium predictive proteinschemistrygenetics pylorigenetics reading research ribosomeschemistrygenetics sensitivity sitesgenetics specificity statistical structural study subtilisgenetics support tests tuberculosisgenetics value 0500 of open by kaspermunch to the group Bioinformatics on 2006-11-02 10:07:59 as
	The Ensembl automatic gene annotation system [My Copy] Genome Res, Vol. 14, No. 5. (May 2004), pp. 942-950. by V. Curwen, E. Eyras, T. D. Andrews, et al.L. Clarke, E. Mongin, S. M. Searle, M. Clamp posted to 0500 biologymethods computational helminth helminthgenetics helminthphysiology mice structural support tandem tests 20040818 acid dnagenetics dosage human proteinsgenetics pseudogenesgenetics sequence tags untranslated us value animals anophelesgenetics caenorhabditisgenetics comparative genome homology insect insectphysiology non-us predictive rats regionsgenetics repeat sequencesgenetics amino dna gene govt of phs software study alignmentmethods automation expressed genes humans research structuralphysiology by kaspermunch to the group Bioinformatics on 2006-11-02 10:07:49 as
	ESTGenes: alternative splicing from ESTs in Ensembl [My Copy] Genome Res, Vol. 14, No. 5. (May 2004), pp. 976-987. by E. Eyras, M. Caccamo, V. Curwen, M. Clamp posted to alternative comparative computational rats research animals expressed genetic insect support us caenorhabditis culicidaegenetics elegansgenetics humans mice results structural 0500 20040818 biology caenorhabditisgenetics dna genes govt helminthgenetics non-us phs predictive splicinggenetics value helminth of reproducibility sequence software study tags tests transcription zebrafishgenetics by kaspermunch to the group Bioinformatics on 2006-11-02 10:07:38 as
	A comprehensive comparison of comparative RNA structure prediction approaches [My Copy] BMC Bioinformatics, Vol. 5, No. 1. (Sep 2004) by P. P. Gardner, R. Giegerich posted to 0500 20041002 by kaspermunch to the group Bioinformatics on 2006-11-02 10:07:19 as
	Comparative ab initio prediction of gene structures using pair HMMs [My Copy] Bioinformatics, Vol. 18, No. 10. (Oct 2002), pp. 1309-1318. by I. M. Meyer, R. Durbin posted to databases software specificity alignmentmethods chains mice sequence 0500 algorithms comparative exonsgenetics expression genetic models regulation analysis animals markov proteomicsmethods research study 20030506 acid and dnamethods gene govt humans non-us nucleic of reproducibility results sensitivity support by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:59 as
	Gene finding with a hidden Markov model of genome structure and evolution [My Copy] Bioinformatics, Vol. 19, No. 2. (Jan 2003), pp. 219-227. by J. S. Pedersen, J. Hein posted to 0500 20030828 algorithms alignmentmethods analysis animals chains computer dnamethods evolution genetic genome govt homology humans markov mice models molecular non-us phylogeny processes research sequence simulation statistical stochastic support by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:58 as
	TigrScan and GlimmerHMM: two open source ab initio eukaryotic gene-finders [My Copy] Bioinformatics, Vol. 20, No. 16. (Nov 2004), pp. 2878-2879. by W. H. Majoros, M. Pertea, S. L. Salzberg posted to 0500 20040518 by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:56 as
	Increase of functional diversity by alternative splicing [My Copy] Trends Genet, Vol. 19, No. 3. (Mar 2003), pp. 124-128. by E. V. Kriventseva, I. Koch, R. Apweiler, et al.M. Vingron, P. Bork, M. S. Gelfand, S. Sunyaev posted to 0500 20030605 acid acidsmetabolism alternative amino animals biology computational databases genetics humans isoformsanalysischemistry ligands models molecular protein selection sequence splicing structure tertiary by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:56 as
	Fast feature selection using a simple estimation of distribution algorithm: a case study on splice site prediction [My Copy] Bioinformatics, Vol. 19 Suppl 2 (2003), pp. II179-II188. by Y. Saeys, S. Degroeve, D. Aeyels, Y. Van De Peer, P. Rouze posted to 0500 20031010 by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:54 as
	Feature selection for splice site prediction: a new method using EDA-based feature ranking [My Copy] BMC Bioinformatics, Vol. 5, No. 1. (May 2004) by Y. Saeys, S. Degroeve, D. Aeyels, P. Rouze, Y. Van de Peer posted to 0500 20040826 adenosinemetabolism algorithms arabidopsisgenetics base biologymethodsstatistics chromosomes comparative compositiongenetics computational data databases genetic guaninemetabolism numerical of plantclassificationgenetics plantgenetics predictive rna sitesgenetics software softwarestatistics splice study tests validation value by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:54 as
	AUGUSTUS: a web server for gene finding in eukaryotes [My Copy] Nucleic Acids Res, Vol. 32, No. Web Server issue. (Jul 2004), pp. W309-W312. by M. Stanke, R. Steinkamp, S. Waack, B. Morgenstern posted to 0500 20040821 animals chains drosophila genes genome genomics human interface internet introns markov melanogastergenetics software user-computer by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:46 as
	Comparative analyses of multi-species sequences from targeted genomic regions [My Copy] Nature, Vol. 424, No. 6950. (Aug 2003), pp. 788-793. by J. W. Thomas, J. W. Touchman, R. W. Blakesley, et al.G. G. Bouffard, Beckstrom S. M. Sternberg, E. H. Margulies, M. Blanchette, A. C. Siepel, P. J. Thomas, J. C. Mcdowell, B. Maskeri, N. F. Hansen, M. S. Schwartz, R. J. Weber, W. J. Kent, D. Karolchik, T. C. Bruen, R. Bevan, D. J. Cutler, S. Schwartz, L. Elnitski, J. R. Idol, A. B. Prasad, Lee S. Q. Lin, V. V. Maduro, T. J. Summers, M. E. Portnoy, N. L. Dietrich, N. Akhter, K. Ayele, B. Benjamin, K. Cariaga, C. P. Brinkley, S. Y. Brooks, S. Granite, X. Guan, J. Gupta, P. Haghighi, S. L. Ho, M. C. Huang, E. Karlins, P. L. Laric, R. Legaspi, M. J. Lim, Q. L. Maduro, C. A. Masiello, S. D. Mastrian, J. C. Mccloskey, R. Pearson, S. Stantripop, E. E. Tiongson, J. T. Tran, C. Tsurgeon, J. L. Vogt, M. A. Walker, K. D. Wetherby, L. S. Wiggins, A. C. Young, L. H. Zhang, K. Osoegawa, B. Zhu, B. Zhao, C. L. Shu, P. J. De Jong, C. E. Lawrence, A. F. Smit, A. Chakravarti, D. Haussler, P. Green, W. Miller, E. D. Green posted to 0500 20030822 7genetics acid alignment animals chromosomes comparative conductance conserved cystic dna elementsgenetics evolution fibrosis genome genomics govt homology human mammalsgenetics molecular mutagenesisgenetics non-us nucleic pair phs phylogeny regulatorgenetics sequence sequencegenetics species specificity study support transmembrane transposable us vertebratesgenetics by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:44 as
	Conserved sequence elements associated with exon skipping [My Copy] Nucleic Acids Res, Vol. 31, No. 7. (Apr 2003), pp. 1974-1983. by E. Miriami, H. Margalit, R. Sperling posted to 0500 20030417 acid alternative animals base binding conserved databases exonsgenetics gc human nucleic rich sequence sequencegenetics sitesgenetics splicinggenetics by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:44 as
	Evolution of alternative splicing: deletions, insertions and origin of functional parts of proteins from intron sequences [My Copy] Trends Genet, Vol. 19, No. 3. (Mar 2003), pp. 115-119. by F. A. Kondrashov, E. V. Koonin posted to 0500 20030605 acid alternative amino animals conserved data evolution genetic homology human introns isoformschemistrygenetics models molecular protein proteinschemistry sequence splicinggenetics structure tertiary by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:43 as
	The RNAi revolution [My Copy] Nature, Vol. 430, No. 6996. (Jul 2004), pp. 161-164. by C. D. Novina, P. A. Sharp posted to 0500 20040728 animals double-strandedgeneticsmetabolism geneticgenetics interference interferinggeneticsmetabolism micrornasgeneticsmetabolism rna small transcription transgenesgenetics by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:41 as
	HMM sampling and applications to gene finding and alternative splicing [My Copy] Bioinformatics, Vol. 19 Suppl 2 (Oct 2003), pp. II36-II41. by S. L. Cawley, L. Pachter posted to 0500 20031010 by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:39 as
	Gene prediction with a hidden Markov model and a new intron submodel [My Copy] Bioinformatics, Vol. 19 Suppl 2 (Oct 2003), pp. II215-II225. by M. Stanke, S. Waack posted to 0500 20031010 by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:39 as
	Into the heart of darkness: large-scale clustering of human non-coding DNA [My Copy] Bioinformatics, Vol. 20 Suppl 1 (Aug 2004), pp. I40-I48. by G. Bejerano, D. Haussler, M. Blanchette posted to 0500 20040721 by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:36 as
	Ultraconserved elements in the human genome [My Copy] Science, Vol. 304, No. 5675. (May 2004), pp. 1321-1325. by G. Bejerano, M. Pheasant, I. Makunin, et al.S. Stephen, W. J. Kent, J. S. Mattick, D. Haussler posted to 0500 20040616 acid alternative animals base biology chickensgenetics computational conformation conserved data dna dogsgenetics evolution exons expression gene genes genome govt human intergenic introns micegenetics molecular mutation non-us nucleic phs ratsgenetics regulation rnachemistrygeneticsmetabolism sequence splicing structural support takifugugenetics us by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:35 as
	Analysis and recognition of 5' UTR intron splice sites in human pre-mRNA [My Copy] Nucleic Acids Res, Vol. 32, No. 3. (2004), pp. 1131-1142. by E. Eden, S. Brunak posted to 0500 20040513 5 analysis computer data exons genetic govt human introns molecular networks neural non-us nucleotidesanalysis precursorschemistrymetabolism regionschemistrymetabolism rna rnamethods sequence sites splice support translation untranslated by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:34 as
	Solving the riddle of the bright mismatches: labeling and effective binding in oligonucleotide arrays [My Copy] Phys Rev E Stat Nonlin Soft Matter Phys, Vol. 68, No. 1 Pt 1. (Jul 2003) by F. Naef, M. O. Magnasco posted to 0500 20040527 analysismethods array base biophysics biotinylation data human messengermetabolism models molecular oligonucleotide rna rnachemistry sequence statistical by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:32 as
	Ordered partitioning reveals extended splice-site consensus information [My Copy] Genome Res, Vol. 14, No. 1. (Jan 2004), pp. 67-78. by M. Weir, M. Rice posted to 0500 20040221 animals base biologymethods chromosome computational consensus databases drosophila genetic genome govt mapping melanogastergenetics mismatchgenetics models non-us pair rna sequencegenetics sitesgenetics splice support by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:31 as
	Gene finding in novel genomes [My Copy] BMC Bioinformatics, Vol. 5, No. 1. (May 2004) by I. Korf posted to 0500 20040728 animals arabidopsisgenetics biologymethods caenorhabditis computational databases drosophila elegansgenetics genes genetic geneticsgenetics genome govt helminthgenetics insectgenetics melanogastergenetics non-us of phs plant plantgenetics predictive software structural structuralgenetics support tests us value variation by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:28 as

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