Group: Bioinformatics - with tag arabidopsis [19 articles] Export

Recent papers posted by members of the Bioinformatics group with tag arabidopsis

	The chromatin remodelling complex FACT associates with actively transcribed regions of the Arabidopsis genome. [My Copy] Plant J, Vol. 40, No. 5. (2004), pp. 660-71. by M. Duroux, A. Houben, K. Ruzicka, J. Friml, K. D. Grasser posted to genome-chromatin transcription support research regulation proteinsmetabolism plant nucleusmetabolism non-us interphasephysiology govt genetic gene factorsmetabolism expression differentiation chromatinmetabolism cell arabidopsiscytologygeneticsmetabolism arabidopsis by sameetmehta to the group Bioinformatics on 2007-01-31 02:57:42 as along with 1 group ProkaryoteInterestGroup
	Role of transposable elements in heterochromatin and epigenetic control. [My Copy] Nature, Vol. 430, No. 6998. (2004), pp. 471-6. by Z. Lippman, A. V. Gendrel, M. Black, et al.M. W. Vaughn, N. Dedhia, W. R. Mccombie, K. Lavine, V. Mittal, B. May, K. D. Kasschau, J. C. Carrington, R. W. Doerge, V. Colot, R. Martienssen posted to sequencesgenetics sequence rna research repeat regulation proteinsgeneticsmetabolism proteinsgenetics plantgenetics plant phs oligonucleotide non-us non-phs methylation interferinggeneticsmetabolism imprinting homeodomain heterochromatingenetics govt genomic geneticgenetics gene factorsgeneticsmetabolism expression epigenesis elementsgenetics dna-binding dna cytosine-5--methyltransferasemetabolism cluster chromosomes array arabidopsisgenetics arabidopsis analysis genome-chromatin us transposable transcription tandem support small by sameetmehta to the group Bioinformatics on 2007-01-31 02:57:31 as along with 1 group ProkaryoteInterestGroup
	Maternal control of seed development. [My Copy] Semin Cell Dev Biol, Vol. 12, No. 5. (2001), pp. 381-6. by A. M. Chaudhury, F. Berger posted to genome-chromatin transcription silencingphysiology seedsembryologygeneticsphysiology regulation proteinsgeneticsphysiology proteins plant methylation imprintinggeneticsphysiology germ genomic gene fertilizationgeneticsphysiology factorsgeneticsphysiology expression dna developmentalgeneticsphysiology cellsphysiology arabidopsis by sameetmehta to the group Bioinformatics on 2007-01-31 02:57:31 as along with 1 group ProkaryoteInterestGroup
	Polycomb group complexes self-regulate imprinting of the Polycomb group gene MEDEA in Arabidopsis. [My Copy] Curr Biol, Vol. 16, No. 5. (2006), pp. 486-92. by P. E. Jullien, A. Katz, M. Oliva, N. Ohad, F. Berger posted to genome-chromatin us support silencing seedsgeneticsmetabolism research repressor regulation proteinsmetabolismphysiology proteinsgeneticsmetabolism protein processing post-translational plant non-us non-phs models methylation imprinting immunoprecipitation histonesmetabolism govt genomic genetic gene expression disassembly development chromatin assembly arabidopsisembryologygeneticsgrowth arabidopsis and by sameetmehta to the group Bioinformatics on 2007-01-31 02:57:11 as along with 1 group ProkaryoteInterestGroup
	Two TIR:NB:LRR genes are required to specify resistance to Peronospora parasitica isolate Cala2 in Arabidopsis. [My Copy] Plant J, Vol. 38, No. 6. (June 2004), pp. 898-909. by E. Sinapidou, K. Williams, L. Nott, et al.S. Bahkt, M. Tör, I. Crute, P. Bittner-Eddy, J. Beynon posted to arabidopsis gene plant r_gene resistance rga by bsmagic to the group Bioinformatics on 2006-11-27 14:23:42 as along with 1 person and 1 group saru bioinplant
	Genome-Wide Analysis of NBS-LRR-Encoding Genes in Arabidopsis [My Copy] Plant Cell, Vol. 15, No. 4. (1 April 2003), pp. 809-834. by Blake C. Meyers, Alexander Kozik, Alyssa Griego, Hanhui Kuang, Richard W. Michelmore posted to arabidopsis gene plant r_gene resistance rga by bsmagic to the group Bioinformatics on 2006-11-27 14:23:26 as along with 2 people and 1 group saru talponer bioinplant
	The Arabidopsis thaliana TIR-NB-LRR R-protein, RPP1A; protein localization and constitutive activation of defence by truncated alleles in tobacco and Arabidopsis [My Copy] The Plant Journal, Vol. 47, No. 6. (September 2006), pp. 829-840. by Michael Weaver, L., Swiderski, et al.R. Michal, Li, Yan, Jones, D. G. Jonathan posted to arabidopsis gene plant r_gene resistance rga by bsmagic to the group Bioinformatics on 2006-11-27 14:23:00 as along with 1 person and 1 group saru bioinplant
	A genome-wide survey of R gene polymorphisms in Arabidopsis. [My Copy] Plant Cell, Vol. 18, No. 8. (August 2006), pp. 1803-1818. by E. G. Bakker, C. Toomajian, M. Kreitman, J. Bergelson posted to arabidopsis gene plant polymorphisms r_gene resistance rga by bsmagic to the group Bioinformatics on 2006-11-27 14:15:13 as along with 2 people and 1 group maren saru bioinplant
	Host-Parasite Coevolutionary Conflict Between Arabidopsis and Downy Mildew [My Copy] Science, Vol. 306, No. 5703. (2004), pp. 1957-1960. by R. L. Allen, Bittner P. D. Eddy, Grenville L. J. Briggs, et al.J. C. Meitz, A. P. Rehmany, L. E. Rose, J. L. Beynon posted to arabidopsis coevolution wole by kehan to the group Bioinformatics on 2006-09-18 16:08:57 as along with 2 groups biodiversity_conservation GrassBase
	Comparative Genomics of Brassica oleracea and Arabidopsis thaliana Reveal Gene Loss, Fragmentation, and Dispersal after Polyploidy [My Copy] Plant Cell, Vol. 18, No. 6. (1 June 2006), pp. 1348-1359. by Christopher D. Town, Foo Cheung, Rama Maiti, et al.Jonathan Crabtree, Brian J. Haas, Jennifer R. Wortman, Erin E. Hine, Ryan Althoff, Tamara S. Arbogast, Luke J. Tallon, Marielle Vigouroux, Martin Trick, Ian Bancroft posted to arabidopsis brassica comparative dispersal evolution fragmentation gene genomics loss polyploidy by bsmagic to the group Bioinformatics on 2006-07-28 05:37:37 as along with 2 people and 1 group mtruksa echinotrix bioinplant
	The granule-bound starch synthase (GBSSI) gene in the Rosaceae: multiple loci and phylogenetic utility. [My Copy] Mol Phylogenet Evol, Vol. 17, No. 3. (Dec 2000), pp. 388-400. by R. C. Evans, L. A. Alice, C. S. Campbell, E. A. Kellogg, T. A. Dickinson posted to 11133193 alignment analysis angiosperms animals arabidopsis base bayes behavior biology blotting cerevisiae chain chromosome classification cloning comparative composition computational conserved crosses cytoplasmic data developmental dna dna-binding dosage duplicate duplication evolution expression feeding flowers functions fungal gene genes genetic genetics genome genotype govt granules leaves likelihood loci mapping models molecular mutagenesis mutation non-phs non-us of phenotype phylogeny physiology plant plants poaceae polymerase polymorphism polyploidy primers proteins pseudogenes quantitative reaction regulation research ribosomal roots rubiaceae saccharomyces sequence setaria shoots southern spacer species specificity starch study support synteny synthase theorem trait us variance variation bibtex-import by kehan to the group Bioinformatics on 2006-07-13 16:23:34 as along with 2 groups biodiversity_conservation GrassBase
	Molecular phylogenetics of Poaceae: an expanded analysis of rbcL sequence data. [My Copy] Mol Phylogenet Evol, Vol. 5, No. 2. (Apr 1996), pp. 352-8. by M. R. Duvall, B. R. Morton posted to 8728393 acid acids africa alignment amino analysis animals arabidopsis base caenorhabditis carboxylase cattle chain climate coli comparative components d-aspartate-l-isoaspartate data dna drosophila dynamics elegans environment escherichia evolution factors genetic genome geography gluten govt humans mays melanogaster methyltransferase methyltransferases mice molecular non-phs non-us phs phylogeny plant plants poaceae polymerase polymorphism population primers protein rats reaction research ribosomal ribulose-bisphosphate sequence south starch study support synthase time triticum us weight zea bibtex-import by kehan to the group Bioinformatics on 2006-07-13 16:23:26 as along with 2 groups biodiversity_conservation GrassBase
	Slipped-strand mispairing in a plastid gene: rpoC2 in grasses (Poaceae). [My Copy] Mol. Biol. Evol., Vol. 11, No. 1. (Jan 1994), pp. 1-8. by M. P. Cummings, L. M. King, E. A. Kellogg posted to 5s 8121278 acid aerobiosis alcohol alignment amino anaerobiosis angiosperms animals arabidopsis base c cell cereals cerevisiae chloroplasts comparative complex conformation cytochrome data dehydrogenase diploidy dna dna-directed electron enzyme evolution expression family fungal fungi gene genes genetic genetics govt group haplotypes homeobox homeodomain homology humans immunoglobulin induction iv kinetics mays models molecular multigene mutation non-phs non-us nucleic nucleus oxygen phs phylogeny plant plants plastids poaceae polymerases polymorphism primers protein proteins region regulation repetitive research ribosomal rna saccharomyces secondary selection sequence sequences species specificity structural structure study support transcription transport triticum us variable variation zea bibtex-import by kehan to the group Bioinformatics on 2006-07-13 16:23:22 as along with 2 groups biodiversity_conservation GrassBase
	Zea systematics: ribosomal ITS evidence. [My Copy] Mol. Biol. Evol., Vol. 13, No. 4. (Apr 1996), pp. 612-22. by E. S. Buckler, T. P. Holtsford posted to 8882504 acid acids africa alignment amino analysis animals arabidopsis base caenorhabditis cattle climate coli comparative components d-aspartate-l-isoaspartate data dna drosophila dynamics elegans environment escherichia evolution factors genetic genome geography gluten govt humans mays melanogaster methyltransferase methyltransferases mice molecular non-phs non-us phs phylogeny plant poaceae polymorphism population protein rats research ribosomal sequence south starch study support synthase time triticum us weight zea bibtex-import by kehan to the group Bioinformatics on 2006-07-13 16:23:15 as along with 2 groups biodiversity_conservation GrassBase
	Phylogenetic relationships and evolution of the KNOTTED class of plant homeodomain proteins. [My Copy] Mol. Biol. Evol., Vol. 16, No. 4. (Apr 1999), pp. 553-63. by G. Bharathan, B. J. Janssen, E. A. Kellogg, N. Sinha posted to trait us variance variation bibtex-import synthase 10331280 acid alignment amino analysis angiosperms animals arabidopsis base bayes behavior biology blotting cerevisiae chain chromosome classification cloning comparative composition computational conserved crosses cytoplasmic data developmental dna dna-binding dosage duplicate duplication evolution expression feeding flowers functions fungal gene genes genetic genetics genome genotype govt granules homeobox homeodomain homology leaves likelihood loci mapping models molecular mutagenesis mutation non-phs non-us of phenotype phylogeny physiology plant plants poaceae polymerase polymorphism polyploidy primers proteins pseudogenes quantitative reaction regulation research ribosomal roots rubiaceae saccharomyces sequence setaria shoots southern spacer species specificity starch study support synteny theorem by kehan to the group Bioinformatics on 2006-07-13 16:23:11 as along with 2 groups biodiversity_conservation GrassBase
	Do Plants Have a One-Way Ticket to Genomic Obesity? [My Copy] Plant Cell, Vol. 9, No. 9. (Sep 1997), pp. 1509-1514. by J. L. Bennetzen, E. A. Kellogg posted to 12237393 analysis arabidopsis base bayes cerevisiae chain chromosome comparative composition conserved crosses data developmental dna duplicate duplication evolution expression flowers functions fungal gene genes genetic genome genotype govt leaves likelihood loci mapping models molecular mutagenesis mutation non-phs non-us of phenotype phylogeny physiology plant plants poaceae polymerase polymorphism polyploidy primers pseudogenes quantitative reaction regulation research ribosomal rubiaceae saccharomyces sequence setaria spacer species specificity study support synteny theorem trait us variance bibtex-import by kehan to the group Bioinformatics on 2006-07-13 16:23:08 as along with 2 groups biodiversity_conservation GrassBase
	Reply. [My Copy] Plant Cell, Vol. 9, No. 11. (Nov 1997), pp. 1901-1902. by J. L. Bennetzen, E. A. Kellogg posted to genetic genome genotype govt leaves likelihood loci mapping models molecular mutagenesis mutation non-phs non-us of phenotype phylogeny physiology plant plants poaceae polymerase 12237351 analysis arabidopsis base bayes cerevisiae chain chromosome comparative composition conserved crosses data developmental dna polymorphism polyploidy primers pseudogenes quantitative reaction regulation research ribosomal rubiaceae saccharomyces sequence setaria spacer species specificity study support synteny theorem trait us variance bibtex-import duplicate duplication evolution expression flowers functions fungal gene genes by kehan to the group Bioinformatics on 2006-07-13 16:23:01 as along with 2 groups biodiversity_conservation GrassBase
	Genome wide analysis of Arabidopsis core promoters. [My Copy] BMC Genomics, Vol. 6, No. 1. (25 February 2005) by C. Molina, E. Grotewold posted to arabidopsis genome promoter by kaspermunch to the group Bioinformatics on 2005-11-17 15:35:37 as along with 6 people megraw wowalz kengg byy debasis dandaman
	Empirical Analysis of Transcriptional Activity in the Arabidopsis Genome [My Copy] Science, Vol. 302, No. 5646. (31 October 2003), pp. 842-846. by Kayoko Yamada, Jun Lim, Joseph M. Dale, et al.Huaming Chen, Paul Shinn, Curtis J. Palm, Audrey M. Southwick, Hank C. Wu, Christopher Kim, Michelle Nguyen, Paul Pham, Rosa Cheuk, George Karlin-Newmann, Shirley X. Liu, Bao Lam, Hitomi Sakano, Troy Wu, Guixia Yu, Molly Miranda, Hong L. Quach, Matthew Tripp, Charlie H. Chang, Jeong M. Lee, Mitsue Toriumi, Marie M. Chan, Carolyn C. Tang, Courtney S. Onodera, Justine M. Deng, Kenji Akiyama, Yasser Ansari, Takahiro Arakawa, Jenny Banh, Fumika Banno, Leah Bowser, Shelise Brooks, Piero Carninci, Qimin Chao, Nathan Choy, Akiko Enju, Andrew D. Goldsmith, Mani Gurjal, Nancy F. Hansen, Yoshihide Hayashizaki, Chanda Johnson-Hopson, Vickie W. Hsuan, Kei Iida, Meagan Karnes, Shehnaz Khan, Eric Koesema, Junko Ishida, Paul X. Jiang, Ted Jones, Jun Kawai, Asako Kamiya, Cristina Meyers, Maiko Nakajima, Mari Narusaka, Motoaki Seki, Tetsuya Sakurai, Masakazu Satou, Racquel Tamse, Maria Vaysberg, Erika K. Wallender, Cecilia Wong, Yuki Yamamura, Shiaulou Yuan, Kazuo Shinozaki, Ronald W. Davis, Athanasios Theologis, Joseph R. Ecker posted to arabidopsis genome tiling transcriptome by kaspermunch to the group Bioinformatics on 2005-11-16 12:48:26 as along with 4 people ThomasDOtto lptolik sdinka xwbcn

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flowering	164
flower	81
tfs	81
mirna	80
trichome	74
plant	73
sam	71
root	56
review	54
circadianclock	53
lfy	51
leaf	43
bioinformatics	40
printed	40
development	38
unread	36
chip	35
rice	35
tf	35
light_sensing	34
identity	33
microarray	33
ft	32
gene	32
evolution	31
circadian_clock	29
kinase	29
network	29
epigenetics	28
genome	28
vernalization	28
rna	27
circadian	26
genome-wide	26
thaliana	25
auxin	24
microrna	24
myb	23
plants	22
stm	22
histone	21
methylation	20
ap1	19
metabolite	19
photoperiod	19
lab	18
stemcell	18
clv	17
embryo	17
phytochrome	17
promoter	16
disease	15
eucariotic_transcription_regulation	15
flavonoid	15
ga	15
transposable_element	15
bhlh	14
database	14
expression	14
genomics	14
knox	14
meiosis	14
transcription	14
ag	13
resistance	13
anther	12
bract	12
chromatin	12
cuc	12
motif	12
r_gene	12
rga	12
fruit	11
gpi	11
hormone	11
patterning	11
prediction	11
prospectus	11
regulation	11
rlk	11
tfl	11
clock	10
comparative_study	10
peptide	10
polyploidy	10
sirna	10
target	10
454	9
boundary	9
co	9
proteomics	9
soc1	9
transcriptome	9
cotyledon	8
methods	8
phylogeny	8
populus	8
signaling	8
stomata	8
tfl1	8

Group: Bioinformatics - with tag arabidopsis [19 articles] Export

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