Group: Bioinformatics - with tag exons [29 articles] Export

Recent papers posted by members of the Bioinformatics group with tag exons

	Identification of SATB2 as the cleft palate gene on 2q32-q33. [My Copy] Hum Mol Genet, Vol. 12, No. 19. (2003), pp. 2491-501. by D. R. Fitzpatrick, I. M. Carr, L. Mclaren, et al.J. P. Leek, P. Wightman, K. Williamson, P. Gautier, N. Mcgill, C. Hayward, H. Firth, A. F. Markham, J. A. Fantes, D. T. Bonthron posted to genome-chromatin weight translocation transcription tertiary support study structure situ sequence research regulation reading proteins protein physical phylogeny palategenetics palatecytology pair open non-us motifs molecular mice mapping in hybridization humans human homology govt genetic genes gene frames fluorescence expression exons drosophila disassemblygenetics developmental data cultured comparative cleft chromosomes chromosome chromatin cells base assembly animals and amino acid 2 by sameetmehta to the group Bioinformatics on 2007-01-31 02:57:18 as along with 1 group ProkaryoteInterestGroup
	Gene identification in novel eukaryotic genomes by self-training algorithm [My Copy] Nucleic Acids Res, Vol. 33, No. 20. (2005), pp. 6494-6506. by A. Lomsadze, Ter V. Hovhannisyan, Y. O. Chernoff, M. Borodovsky posted to 0900 20051220 algorithms animals chains comparative exons extramural genes genome genomicsmethods markov nih of phylogeny reproducibility research results study support by kaspermunch to the group Bioinformatics on 2006-11-02 10:09:02 as
	A non-EST-based method for exon-skipping prediction [My Copy] Genome Res, Vol. 14, No. 8. (Aug 2004), pp. 1617-1623. by R. Sorek, R. Shemesh, Y. Cohen, O. Basechess, G. Ast, R. Shamir posted to 0500 20040924 acid alternative animals biologymethods comparative computational databases exons expressed genetic genome human humans introns messengergenetics mice models nucleic rna sequence splicing study tags by kaspermunch to the group Bioinformatics on 2006-11-02 10:09:02 as
	Genome-wide survey of human alternative pre-mRNA splicing with exon junction microarrays [My Copy] Science, Vol. 302, No. 5653. (Dec 2003), pp. 2141-2144. by J. M. Johnson, J. Castle, Garrett P. Engele, et al.Z. Kan, P. M. Loerch, C. D. Armour, R. Santos, E. E. Schadt, R. Stoughton, D. D. Shoemaker posted to 0500 20040107 alternative amyloid analysis array beta-protein cell chain coa complementary curve data distribution dna exons expressed genome human humans hydrolases hydroxymethylglutaryl isoformsanalysis line molecular monoester oligonucleotide phosphoric polymerase precursoranalysisgenetics precursorsgenetics protein proteinsanalysisgenetics reaction reductasesanalysisgenetics reverse rna roc sequence splicing tags tissue transcriptase by kaspermunch to the group Bioinformatics on 2006-11-02 10:09:00 as
	Computational analysis of full-length mouse cDNAs compared with human genome sequences [My Copy] Mamm Genome, Vol. 12, No. 9. (Sep 2001), pp. 673-677. by S. Kondo, A. Shinagawa, T. Saito, et al.H. Kiyosawa, I. Yamanaka, K. Aizawa, S. Fukuda, A. Hara, M. Itoh, J. Kawai, K. Shibata, Y. Hayashizaki posted to 1001 20020105 acid algorithms analysis animals biologymethods comparative complementarygenetics computational data databases dna dnamethods exons factual genome govt homology human humans introns mice molecular non-us nucleic research sequence study support by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:59 as
	C. elegans ORFeome version 1.1: experimental verification of the genome annotation and resource for proteome-scale protein expression [My Copy] Nat Genet, Vol. 34, No. 1. (May 2003), pp. 35-41. by J. Reboul, P. Vaglio, J. F. Rual, et al.P. Lamesch, M. Martinez, C. M. Armstrong, S. Li, L. Jacotot, N. Bertin, R. Janky, T. Moore, Hudson, J. L. Hartley, M. A. Brasch, J. Vandenhaute, S. Boulton, G. A. Endress, S. Jenna, E. Chevet, V. Papasotiropoulos, P. P. Tolias, J. Ptacek, M. Snyder, R. Huang, M. R. Chance, H. Lee, Doucette L. Stamm, D. E. Hill, M. Vidal posted to 0500 20030528 alternative animals caenorhabditis cloning complementarygenetics databases dna elegansgenetics exons expressed expression frames gene genes genetic genome genomics govt helminth helminthgenetics humans introns molecular non-us open phs proteinsgenetics proteome proteomics reading research sequence splicing support tags us by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:54 as
	How prevalent is functional alternative splicing in the human genome? [My Copy] Trends Genet, Vol. 20, No. 2. (Feb 2004), pp. 68-71. by R. Sorek, R. Shamir, G. Ast posted to 0500 20040310 alternative comparative evolution exons expressed genetic genome human humans introns models molecular rna sequence sites splice splicinggenetics study tags by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:53 as
	Alternative splicing of conserved exons is frequently species-specific in human and mouse [My Copy] Trends Genet, Vol. 21, No. 2. (Feb 2005), pp. 73-77. by Q. Pan, M. A. Bakowski, Q. Morris, et al.W. Zhang, B. J. Frey, T. R. Hughes, B. J. Blencowe posted to 0900 20050409 alternative animals exons expressed genetic genome govt humans mice models non-us protein research sequence software species specificity splicing structure support tags tertiary by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:53 as
	Dark matter in the genome: evidence of widespread transcription detected by microarray tiling experiments [My Copy] Trends Genet, Vol. 21, No. 2. (Feb 2005), pp. 93-102. by J. M. Johnson, S. Edwards, D. Shoemaker, E. E. Schadt posted to 0900 20050409 22 analysismethods animals antisensechemistry array biology chromosomes complementarymetabolism computational dna exons genetic genome human humans introns isoforms messengerchemistrymetabolism models oligonucleotide oligonucleotides pair protein rna sequence software statistics transcription by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:50 as
	Global identification of human transcribed sequences with genome tiling arrays [My Copy] Science, Vol. 306, No. 5705. (Dec 2004), pp. 2242-2246. by P. Bertone, V. Stolc, T. E. Royce, et al.J. S. Rozowsky, A. E. Urban, X. Zhu, J. L. Rinn, W. Tongprasit, M. Samanta, S. Weissman, M. Gerstein, M. Snyder posted to 0900 20050120 acid analysismethods animals array base biology chain complementary computational conserved cpg databases dna exons genetic genome govt homology human humans hybridization intergenic introns islands messengergenetics mice nucleic of oligonucleotide phs polymerase probes proteinschemistrygenetics reaction reproducibility research results reverse rna sequence support transcriptase transcription us by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:47 as
	Experimental annotation of the human genome using microarray technology [My Copy] Nature, Vol. 409, No. 6822. (Feb 2001), pp. 922-927. by D. D. Shoemaker, E. E. Schadt, C. D. Armour, et al.Y. D. He, Garrett P. Engele, P. D. Mcdonagh, P. M. Loerch, A. Leonardson, P. Y. Lum, G. Cavet, L. F. Wu, S. J. Altschuler, S. Edwards, J. King, J. S. Tsang, G. Schimmack, J. M. Schelter, J. Koch, M. Ziman, M. J. Marton, B. Li, P. Cundiff, T. Ward, J. Castle, M. Krolewski, M. R. Meyer, M. Mao, J. Burchard, M. J. Kidd, H. Dai, J. W. Phillips, P. S. Linsley, R. Stoughton, S. Scherer, M. S. Boguski posted to 1001 20010327 22 algorithms alternative analysis array biology cell chromosomes complementary computational dna exons genome human humans line oligonucleotide pair probes project sequence splicing by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:46 as
	EST comparison indicates 38\% of human mRNAs contain possible alternative splice forms [My Copy] FEBS Lett, Vol. 474, No. 1. (May 2000), pp. 83-86. by D. Brett, J. Hanke, G. Lehmann, et al.S. Haase, S. Delbruck, S. Krueger, J. Reich, P. Bork posted to 1915 20000718 alternative comparative databases deletion exons factual gene humans messengerchemistry proteinsgenetics rna software splicing study by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:44 as
	Identification of protein coding regions in genomic DNA [My Copy] J Mol Biol, Vol. 248, No. 1. (Apr 1995), pp. 1-18. by E. E. Snyder, G. D. Stormo posted to 0001 19950421 base biosynthesis comparative composition computer dnachemistrymetabolism exons genes govt humans introns models non-phs of phs protein proteinsgenetics reproducibility research results sequence simulation software statistical study support us by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:36 as
	Finding genes in DNA with a Hidden Markov Model [My Copy] J Comput Biol, Vol. 4, No. 2. (Sum 1997), pp. 127-141. by J. Henderson, S. Salzberg, K. H. Fasman posted to 0001 19970701 algorithms and animals chains comparative databases dnagenetics exons factual genes genetic govt markov models non-phs of phs reproducibility research results sensitivity software specificity study support us vertebratesgenetics by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:27 as
	Identification and analysis of alternative splicing events conserved in human and mouse [My Copy] Proc Natl Acad Sci U S A, Vol. 102, No. 8. (Feb 2005), pp. 2850-2855. by G. W. Yeo, E. Van Nostrand, D. Holste, T. Poggio, C. B. Burge posted to 0900 20050325 alternative animals base conserved evolution exons expressed govt humans mice non-phs non-us phs research sequence splicing support tags us by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:24 as
	Predictive identification of exonic splicing enhancers in human genes [My Copy] Science, Vol. 297, No. 5583. (Aug 2002), pp. 1007-1013. by W. G. Fairbrother, R. F. Yeh, P. A. Sharp, C. B. Burge posted to 1001 20020829 acid analysis biology complementary computational consensus databases dna exons genes genome govt human humans hypoxanthine introns mutation non-us nucleic oligonucleotidesgenetics phosphoribosyltransferasegenetics phs point regulatory research rna sequence sequences splicing support us by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:23 as
	GlimmerM, Exonomy and Unveil: three ab initio eukaryotic genefinders [My Copy] Nucleic Acids Res, Vol. 31, No. 13. (Jul 2003), pp. 3601-3604. by W. H. Majoros, M. Pertea, C. Antonescu, S. L. Salzberg posted to 0500 20030819 analysis arabidopsisgenetics cells chains dnamethods eukaryotic exons genes govt internet introns markov non-phs phs plant research sequence software support us by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:21 as
	Recent advances in gene structure prediction [My Copy] Curr Opin Struct Biol, Vol. 14, No. 3. (Jun 2004), pp. 264-272. by M. R. Brent, R. Guigo posted to 0900 20041230 acid animals base conformation exons genes genomicstrends govt humans introns models molecular non-phs non-us nucleic phs proteinschemistrygeneticsmetabolism research sequence support us by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:12 as
	Identification of protein coding regions in the human genome by quadratic discriminant analysis [My Copy] Proc Natl Acad Sci U S A, Vol. 94, No. 2. (Jan 1997), pp. 565-568. by M. Q. Zhang posted to 0001 19970121 analysis base data dnamethods exons genes genome govt human humans molecular multivariate phs project proteinsgenetics research sequence software structural support us by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:08 as
	A gene expression map for the euchromatic genome of Drosophila melanogaster [My Copy] Science, Vol. 306, No. 5696. (Oct 2004), pp. 655-660. by V. Stolc, Z. Gauhar, C. Mason, et al.G. Halasz, M. F. van Batenburg, S. A. Rifkin, S. Hua, T. Herreman, W. Tongprasit, P. E. Barbano, H. J. Bussemaker, K. P. White posted to 0900 20041216 algorithms analysis animals array biology computational cycle development dna drosophila drosophilagenetics evolution exons expression female gene genes genetic genome govt insect intergenic introns life male melanogastergeneticsgrowth molecular non-phs non-us oligonucleotide phs probes profiling proteinsgeneticsphysiology research rna sequence splicing stages support synteny transcription us by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:04 as
	A generalized hidden Markov model for the recognition of human genes in DNA [My Copy] Proc Int Conf Intell Syst Mol Biol, Vol. 4 (1996), pp. 134-142. by D. Kulp, D. Haussler, M. G. Reese, F. H. Eeckman posted to 0001 19960101 chains chromosomes deletion dnachemistry exons genetic govt humanchemistry humans introns markov models non-phs research sequence software support us by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:55 as
	Exon recognition in vertebrate splicing [My Copy] J Biol Chem, Vol. 270, No. 6. (Feb 1995), pp. 2411-2414. by S. M. Berget posted to 0001 19950210 animals elements enhancer exons genetics introns rna splicing vertebratesgenetics by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:54 as
	Computational identification of promoters and first exons in the human genome [My Copy] Nat Genet, Vol. 29, No. 4. (Dec 2001), pp. 412-417. by R. V. Davuluri, I. Grosse, M. Q. Zhang posted to 1001 20020105 21 22 chromosomes cpg exons genetics genome govt human islands non-us pair phs promoter regions support us by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:53 as
	Prediction of complete gene structures in human genomic DNA [My Copy] J Mol Biol, Vol. 268, No. 1. (Apr 1997), pp. 78-94. by C. Burge, S. Karlin posted to 0001 19970425 analysis animals chains comparative data dna exons genes genetic genetics genome govt human introns markov models molecular non-phs phs probability promoter proteinsgenetics regions rna sequence software splicing study support us vertebratesgenetics by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:51 as
	Influence of intron length on alternative splicing of CD44 [My Copy] Mol Cell Biol, Vol. 18, No. 10. (Oct 1998), pp. 5930-5941. by M. V. Bell, A. E. Cowper, M. P. Lefranc, J. I. Bell, G. R. Screaton posted to 0001 19980919 alternative animals antigens cd44genetics cells cos exons govt human introns mice non-us purines splicing support by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:42 as
	Ultraconserved elements in the human genome [My Copy] Science, Vol. 304, No. 5675. (May 2004), pp. 1321-1325. by G. Bejerano, M. Pheasant, I. Makunin, et al.S. Stephen, W. J. Kent, J. S. Mattick, D. Haussler posted to 0500 20040616 acid alternative animals base biology chickensgenetics computational conformation conserved data dna dogsgenetics evolution exons expression gene genes genome govt human intergenic introns micegenetics molecular mutation non-us nucleic phs ratsgenetics regulation rnachemistrygeneticsmetabolism sequence splicing structural support takifugugenetics us by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:35 as
	Analysis and recognition of 5' UTR intron splice sites in human pre-mRNA [My Copy] Nucleic Acids Res, Vol. 32, No. 3. (2004), pp. 1131-1142. by E. Eden, S. Brunak posted to 0500 20040513 5 analysis computer data exons genetic govt human introns molecular networks neural non-us nucleotidesanalysis precursorschemistrymetabolism regionschemistrymetabolism rna rnamethods sequence sites splice support translation untranslated by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:34 as
	Large-scale transcriptional activity in chromosomes 21 and 22 [My Copy] Science, Vol. 296, No. 5569. (May 2002), pp. 916-919. by P. Kapranov, S. E. Cawley, J. Drenkow, et al.S. Bekiranov, R. L. Strausberg, S. P. Fodor, T. R. Gingeras posted to 1001 20020531 21genetics 22genetics analysis array biology cell cells chain chromosome chromosomes complementary computational contig cultured cytosolmetabolism digeorge dna exons genetic govt human line mapping messengergeneticsmetabolism non-us nucleusmetabolism oligonucleotide pair phs physical polymerase probes reaction reverse rna sequence support syndromegenetics transcriptase transcription tumor us by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:33 as
	Pre-mRNA secondary structure prediction aids splice site prediction [My Copy] Pac Symp Biocomput (2002), pp. 223-234. by D. J. Patterson, K. Yasuhara, W. L. Ruzzo posted to 0400 20021003 acid analysis computer conformation exons functions genetic govt likelihood messengerchemistrygenetics models non-phs nucleic of precursorschemistry reproducibility results rna sequence simulation software splicing support us by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:20 as

Note: You may cite this page as: http://www.citeulike.org/group/664/tag/exons

article	36
c_elegans	36
caenorhabditis_elegans	36
celegans	36
elegans	36
molecular_sequence_data	36
nematode	36
wormbase	36
base_sequence	32
amino_acid_sequence	26
introns	22
caenorhabditis_genetics	18
cloning_molecular	18
restriction_mapping	18
rna_messenger_genetics	16
caenorhabditis_elegans_genetics	14
helminth_proteins_genetics	14
sequence_homology_nucleic_acid	12
rna_splicing	10
dna_genetics	8
genes_structural	8
helminth_proteins_chemistry	8
mutation	8
sequence_alignment	8
transcription_genetic	8
axons_physiology	6
caenorhabditis_enzymology	6
cloned_genes	6
f11c33	6
gene_expression_regulation	6
macromolecular_systems	6
membrane_proteins_genetics	6
molecular_weight	6
polymerase_chain_reaction	6
protein_kinases_genetics	6
sequence_homology_amino_acid	6
unc-54	6
alleles	4
c30a57	4
caenorhabditis_growth_and_development	4
chromosome_mapping	4
cytosol_enzymology	4
dna	4
dna_insertion_elements	4
dna_sequence	4
enz-protein_kinase	4
gene_expression	4
genes_helminth	4
genes_structural_helminth	4
helminth_proteins_metabolism	4
her-1	4
microtubules_physiology	4
myosin_genetics	4
protein_conformation	4
repetitive_sequences_nucleic_acid	4
rna_messenger_chemistry	4
rna_messenger_metabolism	4
unc-86	4
zk2878	4
alternative_splicing	3
evolution	3
regulation	3
actins_genetics	2
b02734	2
c46f111	2
cell_free_system	2
cell_line	2
chromatography_ion_exchange	2
daf-2	2
development	2
dna_isolation_and_purification	2
dna_single_stranded	2
f10c17	2
f37b42	2
f38b21	2
f54d81	2
f56h11	2
fem-1	2
genetic_vectors	2
helminth_proteins_physiology	2
ifc-2	2
isoenzymes_genetics	2
lev-9	2
mec-10	2
mice	2
muscle_proteins_physiology	2
oligodeoxyribonucleotides	2
plasmids	2
polymorphism_genetics	2
protein_kinases_isolation_and_purification	2
r07e46	2
r09g111	2
rna_precursors_chemistry	2
sdc-1	2
sex_determination	2
sup-9	2
t19c38	2
translation_genetic	2
w10g63	2
x_chromosome	2

Group: Bioinformatics - with tag exons [29 articles] Export

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