Group: Bioinformatics - with tag expressed [22 articles] Export

Recent papers posted by members of the Bioinformatics group with tag expressed

	Normalization of boutique two-color microarrays with a high proportion of differentially expressed probes [My Copy] Genome Biology, Vol. 8 (04 January 2007), R2. by Alicia Oshlack, Dianne Emslie, Lynn Corcoran, Gordon K. Smyth posted to 2 boutique colour differential expressed high microarray normalisation probes proportion two by dswan to the group Bioinformatics on 2009-05-15 12:09:57 as along with 2 people jfr GeeSharpMinor
	A non-EST-based method for exon-skipping prediction [My Copy] Genome Res, Vol. 14, No. 8. (Aug 2004), pp. 1617-1623. by R. Sorek, R. Shemesh, Y. Cohen, O. Basechess, G. Ast, R. Shamir posted to 0500 20040924 acid alternative animals biologymethods comparative computational databases exons expressed genetic genome human humans introns messengergenetics mice models nucleic rna sequence splicing study tags by kaspermunch to the group Bioinformatics on 2006-11-02 10:09:02 as
	Genome-wide survey of human alternative pre-mRNA splicing with exon junction microarrays [My Copy] Science, Vol. 302, No. 5653. (Dec 2003), pp. 2141-2144. by J. M. Johnson, J. Castle, Garrett P. Engele, et al.Z. Kan, P. M. Loerch, C. D. Armour, R. Santos, E. E. Schadt, R. Stoughton, D. D. Shoemaker posted to 0500 20040107 alternative amyloid analysis array beta-protein cell chain coa complementary curve data distribution dna exons expressed genome human humans hydrolases hydroxymethylglutaryl isoformsanalysis line molecular monoester oligonucleotide phosphoric polymerase precursoranalysisgenetics precursorsgenetics protein proteinsanalysisgenetics reaction reductasesanalysisgenetics reverse rna roc sequence splicing tags tissue transcriptase by kaspermunch to the group Bioinformatics on 2006-11-02 10:09:00 as
	C. elegans ORFeome version 1.1: experimental verification of the genome annotation and resource for proteome-scale protein expression [My Copy] Nat Genet, Vol. 34, No. 1. (May 2003), pp. 35-41. by J. Reboul, P. Vaglio, J. F. Rual, et al.P. Lamesch, M. Martinez, C. M. Armstrong, S. Li, L. Jacotot, N. Bertin, R. Janky, T. Moore, Hudson, J. L. Hartley, M. A. Brasch, J. Vandenhaute, S. Boulton, G. A. Endress, S. Jenna, E. Chevet, V. Papasotiropoulos, P. P. Tolias, J. Ptacek, M. Snyder, R. Huang, M. R. Chance, H. Lee, Doucette L. Stamm, D. E. Hill, M. Vidal posted to 0500 20030528 alternative animals caenorhabditis cloning complementarygenetics databases dna elegansgenetics exons expressed expression frames gene genes genetic genome genomics govt helminth helminthgenetics humans introns molecular non-us open phs proteinsgenetics proteome proteomics reading research sequence splicing support tags us by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:54 as
	Genome-wide detection of tissue-specific alternative splicing in the human transcriptome [My Copy] Nucleic Acids Res, Vol. 30, No. 17. (Sep 2002), pp. 3754-3766. by Q. Xu, B. Modrek, C. Lee posted to 0400 20021126 acid alternative amino biologystatistics brainmetabolism cdc42 computational data dna-binding expressed expression factorsgenetics female gene geneticgenetics genome govt gtp-binding homology human humans isoformsgenetics library male molecular non-phs numerical profiling protein proteingenetics proteinsgenetics research sequence splicinggenetics support tags transcription us by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:54 as
	ISIS, the intron information system, reveals the high frequency of alternative splicing in the human genome [My Copy] Nat Genet, Vol. 24, No. 4. (Apr 2000), pp. 340-341. by L. Croft, S. Schandorff, F. Clark, K. Burrage, P. Arctander, J. S. Mattick posted to 0900 20000508 alternative biology computational databases exonsgenetics expressed factualtrends frequency gene genome human humans intronsgenetics isoformsgenetics messengergenetics protein rna sequence splicinggenetics tags by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:53 as
	Gene structure prediction and alternative splicing analysis using genomically aligned ESTs [My Copy] Genome Res, Vol. 11, No. 5. (May 2001), pp. 889-900. by Z. Kan, E. C. Rouchka, W. R. Gish, D. J. States posted to 1001 20010629 alignmentinstrumentationmethods alternative biologyinstrumentationmethods comparative computational expressed genes genetic genome govt human humans messengermetabolism non-phs phs research rna sequence software splicinggenetics structuralgenetics study support tags transcription us validation by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:53 as
	In silico screening for tumour-specific expressed sequences in human genome [My Copy] FEBS Lett, Vol. 508, No. 1. (Nov 2001), pp. 143-148. by A. V. Baranova, A. V. Lobashev, D. V. Ivanov, L. L. Krukovskaya, N. K. Yankovsky, A. P. Kozlov posted to 1001 20020105 databases expressed expression gene genes genetic genome human humans library neoplasm neoplasmsgenetics profilingmethods sequence structural tags by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:53 as
	Frequent alternative splicing of human genes [My Copy] Genome Res, Vol. 9, No. 12. (Dec 1999), pp. 1288-1293. by A. A. Mironov, J. W. Fickett, M. S. Gelfand posted to 0001 19991230 5 alignment alternative base contig data databases exonsgenetics expressed factual govt humans intronsgenetics isoformsgenetics mappingmethods molecular non-phs non-us protein regionsgenetics research sequence sequencegenetics splicing support tags untranslated us by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:53 as
	How prevalent is functional alternative splicing in the human genome? [My Copy] Trends Genet, Vol. 20, No. 2. (Feb 2004), pp. 68-71. by R. Sorek, R. Shamir, G. Ast posted to 0500 20040310 alternative comparative evolution exons expressed genetic genome human humans introns models molecular rna sequence sites splice splicinggenetics study tags by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:53 as
	Alternative splicing and genome complexity [My Copy] Nat Genet, Vol. 30, No. 1. (Jan 2002), pp. 29-30. by D. Brett, H. Pospisil, J. Valcarcel, J. Reich, P. Bork posted to 1001 20020205 alternative animals cattle expressed geneticsgenetics genome humans messengergenetics mice rats rna sequence splicing tags variation by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:53 as
	Alternative splicing of conserved exons is frequently species-specific in human and mouse [My Copy] Trends Genet, Vol. 21, No. 2. (Feb 2005), pp. 73-77. by Q. Pan, M. A. Bakowski, Q. Morris, et al.W. Zhang, B. J. Frey, T. R. Hughes, B. J. Blencowe posted to 0900 20050409 alternative animals exons expressed genetic genome govt humans mice models non-us protein research sequence software species specificity splicing structure support tags tertiary by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:53 as
	Empirical analysis of transcriptional activity in the Arabidopsis genome [My Copy] Science, Vol. 302, No. 5646. (Oct 2003), pp. 842-846. by K. Yamada, J. Lim, J. M. Dale, et al.H. Chen, P. Shinn, C. J. Palm, A. M. Southwick, H. C. Wu, C. Kim, M. Nguyen, P. Pham, R. Cheuk, Karlin G. Newmann, S. X. Liu, B. Lam, H. Sakano, T. Wu, G. Yu, M. Miranda, H. L. Quach, M. Tripp, C. H. Chang, J. M. Lee, M. Toriumi, M. M. Chan, C. C. Tang, C. S. Onodera, J. M. Deng, K. Akiyama, Y. Ansari, T. Arakawa, J. Banh, F. Banno, L. Bowser, S. Brooks, P. Carninci, Q. Chao, N. Choy, A. Enju, A. D. Goldsmith, M. Gurjal, N. F. Hansen, Y. Hayashizaki, Johnson C. Hopson, V. W. Hsuan, K. Iida, M. Karnes, S. Khan, E. Koesema, J. Ishida, P. X. Jiang, T. Jones, J. Kawai, A. Kamiya, C. Meyers, M. Nakajima, M. Narusaka, M. Seki, T. Sakurai, M. Satou, R. Tamse, M. Vaysberg, E. K. Wallender, C. Wong, Y. Yamamura, S. Yuan, K. Shinozaki, R. W. Davis, A. Theologis, J. R. Ecker posted to 0500 20031210 acid analysis arabidopsisgenetics array biology chain chromosome chromosomes cloning complementarygenetics computational dna expressed expression frames gene genes genetic genome genomics govt hybridization intergenic mapping messengergenetics molecular non-phs non-us nucleic oligonucleotide open plant plantgenetics polymerase profiling reaction reading research reverse rna sequence support tags transcriptase transcription us by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:49 as
	Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs [My Copy] Nature, Vol. 420, No. 6915. (Dec 2002), pp. 563-573. by Y. Okazaki, M. Furuno, T. Kasukawa, et al.J. Adachi, H. Bono, S. Kondo, I. Nikaido, N. Osato, R. Saito, H. Suzuki, I. Yamanaka, H. Kiyosawa, K. Yagi, Y. Tomaru, Y. Hasegawa, A. Nogami, C. Schonbach, T. Gojobori, R. Baldarelli, D. P. Hill, C. Bult, D. A. Hume, J. Quackenbush, L. M. Schriml, A. Kanapin, H. Matsuda, S. Batalov, K. W. Beisel, J. A. Blake, D. Bradt, V. Brusic, C. Chothia, L. E. Corbani, S. Cousins, E. Dalla, T. A. Dragani, C. F. Fletcher, A. Forrest, K. S. Frazer, T. Gaasterland, M. Gariboldi, C. Gissi, A. Godzik, J. Gough, S. Grimmond, S. Gustincich, N. Hirokawa, I. J. Jackson, E. D. Jarvis, A. Kanai, H. Kawaji, Y. Kawasawa, R. M. Kedzierski, B. L. King, A. Konagaya, I. V. Kurochkin, Y. Lee, B. Lenhard, P. A. Lyons, D. R. Maglott, L. Maltais, L. Marchionni, L. Mckenzie, H. Miki, T. Nagashima, K. Numata, T. Okido, W. J. Pavan, G. Pertea, G. Pesole, N. Petrovsky, R. Pillai, J. U. Pontius, D. Qi, S. Ramachandran, T. Ravasi, J. C. Reed, D. J. Reed, J. Reid, B. Z. Ring, M. Ringwald, A. Sandelin, C. Schneider, C. A. Semple, M. Setou, K. Shimada, R. Sultana, Y. Takenaka, M. S. Taylor, R. D. Teasdale, M. Tomita, R. Verardo, L. Wagner, C. Wahlestedt, Y. Wang, Y. Watanabe, C. Wells, L. G. Wilming, Wynshaw A. Boris, M. Yanagisawa, I. Yang, L. Yang, Z. Yuan, M. Zavolan, Y. Zhu, A. Zimmer, P. Carninci, N. Hayatsu, Hirozane T. Kishikawa, H. Konno, M. Nakamura, N. Sakazume, K. Sato, T. Shiraki, K. Waki, J. Kawai, K. Aizawa, T. Arakawa, S. Fukuda, A. Hara, W. Hashizume, K. Imotani, Y. Ishii, M. Itoh, I. Kagawa, A. Miyazaki, K. Sakai, D. Sasaki, K. Shibata, A. Shinagawa, A. Yasunishi, M. Yoshino, R. Waterston, E. S. Lander, J. Rogers, E. Birney, Y. Hayashizaki posted to 0400 20021228 acid alternative amino animals antisensegenetics chromosome chromosomes cloning complementarygenetics databases dna expressed genesgenetics genetic geneticgenetics genomicsmethods govt humans initiation mammaliangenetics mapping membrane messengeranalysisgenetics micegenetics molecular motifs non-us physical protein proteinsgenetics proteomechemistrygenetics research rna sequence site splicinggenetics structure support tags tertiary transcription untranslatedanalysisgenetics by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:45 as
	Identification and analysis of alternative splicing events conserved in human and mouse [My Copy] Proc Natl Acad Sci U S A, Vol. 102, No. 8. (Feb 2005), pp. 2850-2855. by G. W. Yeo, E. Van Nostrand, D. Holste, T. Poggio, C. B. Burge posted to 0900 20050325 alternative animals base conserved evolution exons expressed govt humans mice non-phs non-us phs research sequence splicing support tags us by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:24 as
	The Ensembl automatic gene annotation system [My Copy] Genome Res, Vol. 14, No. 5. (May 2004), pp. 942-950. by V. Curwen, E. Eyras, T. D. Andrews, et al.L. Clarke, E. Mongin, S. M. Searle, M. Clamp posted to 0500 biologymethods computational helminth helminthgenetics helminthphysiology mice structural support tandem tests 20040818 acid dnagenetics dosage human proteinsgenetics pseudogenesgenetics sequence tags untranslated us value animals anophelesgenetics caenorhabditisgenetics comparative genome homology insect insectphysiology non-us predictive rats regionsgenetics repeat sequencesgenetics amino dna gene govt of phs software study alignmentmethods automation expressed genes humans research structuralphysiology by kaspermunch to the group Bioinformatics on 2006-11-02 10:07:49 as
	ESTGenes: alternative splicing from ESTs in Ensembl [My Copy] Genome Res, Vol. 14, No. 5. (May 2004), pp. 976-987. by E. Eyras, M. Caccamo, V. Curwen, M. Clamp posted to alternative comparative computational rats research animals expressed genetic insect support us caenorhabditis culicidaegenetics elegansgenetics humans mice results structural 0500 20040818 biology caenorhabditisgenetics dna genes govt helminthgenetics non-us phs predictive splicinggenetics value helminth of reproducibility sequence software study tags tests transcription zebrafishgenetics by kaspermunch to the group Bioinformatics on 2006-11-02 10:07:38 as
	Genome-wide detection of alternative splicing in expressed sequences of human genes [My Copy] Nucleic Acids Res, Vol. 29, No. 13. (Jul 2001), pp. 2850-2859. by B. Modrek, A. Resch, C. Grasso, C. Lee posted to 1001 20010803 alignment alternative antigenschemistrygenetics base biology computational consensus conserved databases exonsgenetics expressed familygenetics genesgenetics genome genomics govt hla-d human humans internet intronsgenetics kinasesgenetics messengeranalysisgenetics multigene non-phs non-us nucleotidegenetics of polymorphism protein-serine-threonine reproducibility research results rna sequence sequencegenetics single sitesgenetics splice splicinggenetics support tags us by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:57 as
	A genomic view of alternative splicing [My Copy] Nat Genet, Vol. 30, No. 1. (Jan 2002), pp. 13-19. by B. Modrek, C. Lee posted to 1001 20020205 alternative analysis animals array biology computational dnagenetics expressed false forecasting genetics genomics govt humans isoformsgenetics messengergenetics non-phs oligonucleotide positive protein reactions research rna sequence splicing support tags us variation by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:55 as
	Analysis of canonical and non-canonical splice sites in mammalian genomes [My Copy] Nucleic Acids Res, Vol. 28, No. 21. (Nov 2000), pp. 4364-4375. by M. Burset, I. A. Seledtsov, V. V. Solovyev posted to 1001 20010228 animals base biology computational consensus conserved databases exonsgenetics expressed genome govt humans intronsgenetics non-us of reproducibility research results rna sequence sequencegenetics sitesgenetics software splice splicinggenetics support tags by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:55 as
	Genie--gene finding in Drosophila melanogaster [My Copy] Genome Res, Vol. 10, No. 4. (Apr 2000), pp. 529-538. by M. G. Reese, D. Kulp, H. Tammana, D. Haussler posted to 0900 20000617 analysis animals biologymethods chains comparative computational databases dnamethods drosophila expressed factual genes genetic geneticsgenetics govt insectgenetics markov melanogastergenetics models non-phs phs promoter regions sequence software structural study support tags us by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:52 as
	Human GC-AG alternative intron isoforms with weak donor sites show enhanced consensus at acceptor exon positions [My Copy] Nucleic Acids Res, Vol. 29, No. 12. (Jun 2001), pp. 2581-2593. by T. A. Thanaraj, F. Clark posted to 1001 20010728 alignment alternative base consensus exonsgenetics expressed frequency gene govt human intronsgenetics messengerchemistrygeneticsmetabolism mutationgenetics non-us nuclearchemistrygeneticsmetabolism pairinggenetics precursorschemistrygeneticsmetabolism ribonucleoproteinsmetabolism rna sequence sequencegenetics sitesgenetics small splice spliceosomesmetabolism splicinggenetics support tags by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:37 as

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Group: Bioinformatics - with tag expressed [22 articles] Export

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