Group: Bioinformatics - with tag genome [126 articles] Export

Recent papers posted by members of the Bioinformatics group with tag genome

	Genome-wide analysis of antisense transcription with Affymetrix exon array [My Copy] BMC Genomics, Vol. 9, No. 1. (22 January 2008), 27. by Xijin Ge, Wendy Rubinstein, Yong C. Jung, Qingfa Wu posted to affymetrix analysis antisense array exon genome transcription wide by dswan to the group Bioinformatics on 2009-08-11 11:11:26 as
	GeneRegionScan: a Bioconductor package for probe-level analysis of specific, small regions of the genome. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 15. (1 August 2009), pp. 1978-1979. by Lasse Folkersen, Diego Diez, Craig E. Wheelock, et al.Jesper Z. Haeggström, Susumu Goto, Per Eriksson, Anders Gabrielsen posted to analysis application bioconductor genome level package probe regions small specific by dswan to the group Bioinformatics on 2009-07-21 10:29:15 as along with 2 people shikin guhjy
	Genome-wide allele- and strand-specific expression profiling. [My Copy] Molecular systems biology, Vol. 5 (16 June 2009) by Julien Gagneur, Himanshu Sinha, Fabiana Perocchi, Richard Bourgon, Wolfgang Huber, Lars M. Steinmetz posted to allele antisense expression genome profiling specific strand wide by dswan to the group Bioinformatics on 2009-07-10 10:19:45 as along with 5 people sebastien_vigneau natstreet guhjy leliavski fenghezi
	rtracklayer: an R package for interfacing with genome browsers. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 14. (15 July 2009), pp. 1841-1842. by Michael Lawrence, Robert Gentleman, Vincent Carey posted to application bioconductor browser genome interface r by dswan to the group Bioinformatics on 2009-07-06 11:37:35 as along with 16 people and 2 groups daveGerrard iris42 guhjy aprasad cisevol shikin inesdesantiago daforerog ppgardne natstreet nuin brianb kshameer neils chrisamiller druvus BergmanLab Journal picks
	The Gene Ontology's Reference Genome Project: A Unified Framework for Functional Annotation across Species [My Copy] PLoS Comput Biol, Vol. 5, No. 7. (3 July 2009), e1000431. by The Reference Genome Group of the Gene Ontology Consortium posted to across annnotation framework functional gene genome ontology project reference species unified by dswan to the group Bioinformatics on 2009-07-06 11:30:47 as along with 20 people and 1 group Zephyrus bertelsen rdiaz ptrobajo fgibson NickFurnham guhjy VGreiff cabbagesofdoom Keywan druvus natstreet gjuggler biomcgary polivares tfuji kiekyon TRHvidsten djkt daforerog Journal picks
	A database of phylogenetically atypical genes in archaeal and bacterial genomes, identified using the DarkHorse algorithm. [My Copy] BMC bioinformatics, Vol. 9 (07 October 2008), 419. by Sheila Podell, Terry Gaasterland, Eric E. Allen posted to bacteria bioinformatics database genome horizontal-gene-transfer method software by Thaverkamp to the group Bioinformatics on 2009-04-27 15:25:59 as along with 2 people cgaugain barriot
	Mutation Patterns in the Human Genome: More Variable Than Expected [My Copy] PLoS Biol, Vol. 7, No. 2. (3 February 2009), e1000028. by Laurent Duret posted to genome review by barry to the group Bioinformatics on 2009-02-24 21:55:56 as along with 7 people and 1 group Garamonfok rdiaz leelarcombe idoerg aprasad djkt gjuggler structural_bioinformatics
	Human genomes as email attachments [My Copy] Bioinformatics, Vol. 25, No. 2. (15 January 2009), pp. 274-275. by Scott Christley, Yiming Lu, Chen Li, Xiaohui Xie posted to attachment compression email genome human sequence by dswan to the group Bioinformatics on 2009-01-15 16:14:42 as along with 26 people and 2 groups daforerog hzoltan idonaldson kshameer operon guhjy druvus n00c dnewburger djkt mmartin sobolevnrm jfr psique cisevol GeeSharpMinor neils dullhunk siebert hpiwowar nuin cthachuk rschulz treangen renatomilani jmeppley baker-group BergmanLab
	DNAPlotter: circular and linear interactive genome visualization [My Copy] Bioinformatics, Vol. 25, No. 1. (1 January 2009), pp. 119-120. by Tim Carver, Nick Thomson, Alan Bleasby, Matthew Berriman, Julian Parkhill posted to circular dna genome linear visualisation by dswan to the group Bioinformatics on 2009-01-05 11:18:07 as along with 12 people and 1 group kshameer jandot cisevol ewilban1 orzenil barriot guhjy nuin natstreet GustavoLacerda druvus treangen BergmanLab
	Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project [My Copy] Nature, Vol. 447, No. 7146. (14 June 2007), pp. 799-816. posted to encode genome human project by pengchy to the group Bioinformatics on 2008-10-02 02:50:26 as along with 30 people and 3 groups balajis bertelsen gderwin polivares Eroslavochka timflutre raistrick guhjy cmmorel dpollard ilh djkt plofje ramensky joepickrell massivemayhem fishtank Garamonfok jmuhlich bioyang cabbagezs xingxu antonkratz mimulus_99 julianjonker gjuggler drbal maralena ep161302 jasonflannick JLab EisenLab SorgerLab
	A new pheromone trail-based genetic algorithm for comparative genome assembly [My Copy] Nucl. Acids Res., Vol. 36, No. 10. (1 June 2008), pp. 3455-3462. by Fangqing Zhao, Fanggeng Zhao, Tao Li, Donald A. Bryant posted to assembly bioinformatics genome genomics by fqzhao to the group Bioinformatics on 2008-05-07 21:28:04 as along with 1 person azazello
	Organization and Evolution of Primate Centromeric DNA from Whole-Genome Shotgun Sequence Data [My Copy] PLoS Computational Biology, Vol. 3, No. 9. (1 September 2007), e181. by Can Alkan, Mario Ventura, Nicoletta Archidiacono, Mariano Rocchi, Cenk S. Sahinalp, Evan E. Eichler posted to 2007 bioinformatics evolution genome genomics by hpaces to the group Bioinformatics on 2007-11-03 18:38:16 as along with 1 person zwang
	Genome sequence, comparative analysis and haplotype structure of the domestic dog [My Copy] Nature, Vol. 438, No. 7069., pp. 803-819. by Kerstin Lindblad-Toh, Claire M. Wade, Tarjei S. Mikkelsen, et al.Elinor K. Karlsson, David B. Jaffe, Michael Kamal, Michele Clamp, Jean L. Chang, Edward J. Kulbokas, Michael C. Zody, Evan Mauceli, Xiaohui Xie, Matthew Breen, Robert K. Wayne, Elaine A. Ostrander, Chris P. Ponting, Francis Galibert, Douglas R. Smith, Pieter J. Dejong, Ewen Kirkness, Pablo Alvarez, Tara Biagi, William Brockman, Jonathan Butler, Chee-Wye Chin, April Cook, James Cuff, Mark J. Daly, David Decaprio, Sante Gnerre, Manfred Grabherr, Manolis Kellis, Michael Kleber, Carolyne Bardeleben, Leo Goodstadt, Andreas Heger, Christophe Hitte, Lisa Kim, Klaus-Peter Koepfli, Heidi G. Parker, John P. Pollinger, Stephen M. J. Searle, Nathan B. Sutter, Rachael Thomas, Caleb Webber, Eric S. Lander posted to sabetilab genome by neveaire to the group Bioinformatics on 2007-07-11 17:46:20 as along with 8 people and 6 groups taroleo kmegq melissa21 aprasad indigoviolet dchughes mini1000srule djkt Biostatistics Computational-Genomics EisenLab Neuroscience G4ID Genetics-of-Gambling
	Why Are There Still Over 1000 Uncharacterized Yeast Genes? [My Copy] Genetics, Vol. 176, No. 1. (1 May 2007), pp. 7-14. by Lourdes Pena-Castillo, Timothy R. Hughes posted to yeast genome by neveaire to the group Bioinformatics on 2007-06-08 09:30:05 as along with 4 people and 6 groups dbensasson dchughes cjeans biomcgary Biostatistics Computational-Genomics Neuroscience G4ID Genetics-of-Gambling Marcotte_Lab
	Gene targeting in plants: fingers on the move. [My Copy] Trends Plant Sci, Vol. 11, No. 4. (2006), pp. 159-61. by S. Kumar, G. C. Allen, W. F. Thompson posted to genome-chromatin zinc us targetingmethods support research repair recombination plantsgenetics plant non-us non-phs govt genome genetic gene fingersphysiology endodeoxyribonucleaseschemistrymetabolism dna disassembly chromatin assembly and by sameetmehta to the group Bioinformatics on 2007-01-31 02:57:43 as along with 1 group ProkaryoteInterestGroup
	Transition nuclear proteins are required for normal chromatin condensation and functional sperm development. [My Copy] Genesis, Vol. 38, No. 4. (2004), pp. 200-13. by M. Zhao, C. R. Shirley, S. Hayashi, et al.L. Marcon, B. Mohapatra, R. Suganuma, R. R. Behringer, G. Boissonneault, R. Yanagimachi, M. L. Meistrich posted to genome fluorescence disassembly developmentmetabolismpathology chromosomal chromatingeneticsmetabolism chromatin assembly animals and agingphysiology genome-chromatin us support spermatozoacytologygrowth spermatogenesis research proteins protaminesmetabolism phs non-us non-histonedeficiencygeneticsmetabolism mutationgenetics microscopy mice malegeneticspathology male knockout infertility histonesmetabolism govt by sameetmehta to the group Bioinformatics on 2007-01-31 02:57:29 as along with 1 group ProkaryoteInterestGroup
	Chromatin remodeling and the maintenance of genome integrity. [My Copy] Biochim Biophys Acta, Vol. 1677, No. 1-3. (2004), pp. 158-64. by S. Allard, J. Y. Masson, J. Cote posted to genome-chromatin variation u1 triphosphatemetabolism support substances small rna-binding ribonucleoprotein research repairgenetics proteins nucleargeneticsmetabolism non-us macromolecular humans histonesgeneticsmetabolism histone govt genome genetics drosophila dna disassembly chromatin assembly animals and adenosine acetyltransferasesgeneticsmetabolism acetyltransferases by sameetmehta to the group Bioinformatics on 2007-01-31 02:57:12 as along with 1 group ProkaryoteInterestGroup
	Gene identification in novel eukaryotic genomes by self-training algorithm [My Copy] Nucleic Acids Res, Vol. 33, No. 20. (2005), pp. 6494-6506. by A. Lomsadze, Ter V. Hovhannisyan, Y. O. Chernoff, M. Borodovsky posted to 0900 20051220 algorithms animals chains comparative exons extramural genes genome genomicsmethods markov nih of phylogeny reproducibility research results study support by kaspermunch to the group Bioinformatics on 2006-11-02 10:09:02 as
	A non-EST-based method for exon-skipping prediction [My Copy] Genome Res, Vol. 14, No. 8. (Aug 2004), pp. 1617-1623. by R. Sorek, R. Shemesh, Y. Cohen, O. Basechess, G. Ast, R. Shamir posted to 0500 20040924 acid alternative animals biologymethods comparative computational databases exons expressed genetic genome human humans introns messengergenetics mice models nucleic rna sequence splicing study tags by kaspermunch to the group Bioinformatics on 2006-11-02 10:09:02 as
	Genome-wide survey of human alternative pre-mRNA splicing with exon junction microarrays [My Copy] Science, Vol. 302, No. 5653. (Dec 2003), pp. 2141-2144. by J. M. Johnson, J. Castle, Garrett P. Engele, et al.Z. Kan, P. M. Loerch, C. D. Armour, R. Santos, E. E. Schadt, R. Stoughton, D. D. Shoemaker posted to 0500 20040107 alternative amyloid analysis array beta-protein cell chain coa complementary curve data distribution dna exons expressed genome human humans hydrolases hydroxymethylglutaryl isoformsanalysis line molecular monoester oligonucleotide phosphoric polymerase precursoranalysisgenetics precursorsgenetics protein proteinsanalysisgenetics reaction reductasesanalysisgenetics reverse rna roc sequence splicing tags tissue transcriptase by kaspermunch to the group Bioinformatics on 2006-11-02 10:09:00 as
	Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice [My Copy] Science, Vol. 301, No. 5631. (Jul 2003), pp. 376-379. by S. Kikuchi, K. Satoh, T. Nagata, et al.N. Kawagashira, K. Doi, N. Kishimoto, J. Yazaki, M. Ishikawa, H. Yamada, H. Ooka, I. Hotta, K. Kojima, T. Namiki, E. Ohneda, W. Yahagi, K. Suzuki, C. J. Li, K. Ohtsuki, T. Shishiki, Y. Otomo, K. Murakami, Y. Iida, S. Sugano, T. Fujimura, Y. Suzuki, Y. Tsunoda, T. Kurosaki, T. Kodama, H. Masuda, M. Kobayashi, Q. Xie, M. Lu, R. Narikawa, A. Sugiyama, K. Mizuno, S. Yokomizo, J. Niikura, R. Ikeda, J. Ishibiki, M. Kawamata, A. Yoshimura, J. Miura, T. Kusumegi, M. Oka, R. Ryu, M. Ueda, K. Matsubara, J. Kawai, P. Carninci, J. Adachi, K. Aizawa, T. Arakawa, S. Fukuda, A. Hara, W. Hashizume, N. Hayatsu, K. Imotani, Y. Ishii, M. Itoh, I. Kagawa, S. Kondo, H. Konno, A. Miyazaki, N. Osato, Y. Ota, R. Saito, D. Sasaki, K. Sato, K. Shibata, A. Shinagawa, T. Shiraki, M. Yoshino, Y. Hayashizaki, A. Yasunishi posted to 0500 20030802 acid alternative amino analysis antisensegenetics biology cloning complementary computational data databases dna factorschemistrygenetics frames genes genetic genome govt homology molecular non-us nucleic open oryza plant protein proteinschemistrygeneticsphysiology reading research rna sativagenetics sequence splicing structure support tertiary transcription by kaspermunch to the group Bioinformatics on 2006-11-02 10:09:00 as
	Genome-wide analysis of alternative pre-mRNA splicing in Arabidopsis thaliana based on full-length cDNA sequences [My Copy] Nucleic Acids Res, Vol. 32, No. 17. (2004), pp. 5096-5103. by K. Iida, M. Seki, T. Sakurai, et al.M. Satou, K. Akiyama, T. Toyoda, A. Konagaya, K. Shinozaki posted to 0900 20041013 alternative arabidopsisgeneticsgrowth base chromosome cold complementarychemistry developmentmetabolism dna genome govt mapping messengermetabolism non-us plant plantmetabolism precursorsmetabolism research rna sequence splicing support by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:59 as
	Impact of alternative initiation, splicing, and termination on the diversity of the mRNA transcripts encoded by the mouse transcriptome [My Copy] Genome Res, Vol. 13, No. 6B. (Jun 2003), pp. 1290-1300. by M. Zavolan, S. Kondo, C. Schonbach, et al.J. Adachi, D. A. Hume, Y. Hayashizaki, T. Gaasterland posted to 0500 20030812 alternative analysis animals biologymethodsstatistics cluster comparative computational data databases exonsgenetics genes geneticgenetics geneticsgeneticsphysiology geneticstatistics genome govt initiation messengergeneticsphysiology mice non-phs non-us numerical phs polypyrimidine proteingenetics proteomegenetics research rna sitephysiology sitesgenetics splice splicinggenetics splicinggeneticsphysiology structuralgeneticsphysiology study support tract-binding transcription us variation by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:59 as
	Computational analysis of full-length mouse cDNAs compared with human genome sequences [My Copy] Mamm Genome, Vol. 12, No. 9. (Sep 2001), pp. 673-677. by S. Kondo, A. Shinagawa, T. Saito, et al.H. Kiyosawa, I. Yamanaka, K. Aizawa, S. Fukuda, A. Hara, M. Itoh, J. Kawai, K. Shibata, Y. Hayashizaki posted to 1001 20020105 acid algorithms analysis animals biologymethods comparative complementarygenetics computational data databases dna dnamethods exons factual genome govt homology human humans introns mice molecular non-us nucleic research sequence study support by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:59 as
	Integrative annotation of 21,037 human genes validated by full-length cDNA clones [My Copy] PLoS Biol, Vol. 2, No. 6. (Jun 2004) by T. Imanishi, T. Itoh, Y. Suzuki, et al.C. O'Donovan, S. Fukuchi, K. O. Koyanagi, R. A. Barrero, T. Tamura, Yamaguchi Y. Kabata, M. Tanino, K. Yura, S. Miyazaki, K. Ikeo, K. Homma, A. Kasprzyk, T. Nishikawa, M. Hirakawa, Thierry J. Mieg, Thierry D. Mieg, J. Ashurst, L. Jia, M. Nakao, M. A. Thomas, N. Mulder, Y. Karavidopoulou, L. Jin, S. Kim, T. Yasuda, B. Lenhard, E. Eveno, Y. Suzuki, C. Yamasaki, J. Takeda, C. Gough, P. Hilton, Y. Fujii, H. Sakai, S. Tanaka, C. Amid, M. Bellgard, Bonaldo F. Mde, H. Bono, S. K. Bromberg, A. J. Brookes, E. Bruford, P. Carninci, C. Chelala, C. Couillault, S. J. de Souza, M. A. Debily, M. D. Devignes, I. Dubchak, T. Endo, A. Estreicher, E. Eyras, Fukami K. Kobayashi, G. R. Gopinath, E. Graudens, Y. Hahn, M. Han, Z. G. Han, K. Hanada, H. Hanaoka, E. Harada, K. Hashimoto, U. Hinz, M. Hirai, T. Hishiki, I. Hopkinson, S. Imbeaud, H. Inoko, A. Kanapin, Y. Kaneko, T. Kasukawa, J. Kelso, P. Kersey, R. Kikuno, K. Kimura, B. Korn, V. Kuryshev, I. Makalowska, T. Makino, S. Mano, Mariage R. Samson, J. Mashima, H. Matsuda, H. W. Mewes, S. Minoshima, K. Nagai, H. Nagasaki, N. Nagata, R. Nigam, O. Ogasawara, O. Ohara, M. Ohtsubo, N. Okada, T. Okido, S. Oota, M. Ota, T. Ota, T. Otsuki, Piatier D. Tonneau, A. Poustka, S. X. Ren, N. Saitou, K. Sakai, S. Sakamoto, R. Sakate, I. Schupp, F. Servant, S. Sherry, R. Shiba, N. Shimizu, M. Shimoyama, A. J. Simpson, B. Soares, C. Steward, M. Suwa, M. Suzuki, A. Takahashi, G. Tamiya, H. Tanaka, T. Taylor, J. D. Terwilliger, P. Unneberg, V. Veeramachaneni, S. Watanabe, L. Wilming, N. Yasuda, H. S. Yoo, M. Stodolsky, W. Makalowski, M. Go, K. Nakai, T. Takagi, M. Kanehisa, Y. Sakaki, J. Quackenbush, Y. Okazaki, Y. Hayashizaki, W. Hide, R. Chakraborty, K. Nishikawa, H. Sugawara, Y. Tateno, Z. Chen, M. Oishi, P. Tonellato, R. Apweiler, K. Okubo, L. Wagner, S. Wiemann, R. L. Strausberg, T. Isogai, C. Auffray, N. Nomura, T. Gojobori, S. Sugano posted to 0900 20050208 alternative biologymethods complementarygenetics computational databases dna framesgenetics genesgeneticsphysiology genetic genome govt human humans internet microsatellite non-phs non-us nucleotide open phs polymorphism protein reading repeatsgenetics research single splicinggenetics structure support tertiary us by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:58 as
	Genome-wide assembly and analysis of alternative transcripts in mouse [My Copy] Genome Res, Vol. 15, No. 5. (May 2005), pp. 748-754. by A. A. Sharov, D. B. Dudekula, M. S. Ko posted to 0900 20050610 algorithms alternative analysis animals base biologymethods comparative computational data databases dna genesgenetics genetic genome micegenetics molecular sequence splicinggenetics study by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:57 as
	C. elegans ORFeome version 1.1: experimental verification of the genome annotation and resource for proteome-scale protein expression [My Copy] Nat Genet, Vol. 34, No. 1. (May 2003), pp. 35-41. by J. Reboul, P. Vaglio, J. F. Rual, et al.P. Lamesch, M. Martinez, C. M. Armstrong, S. Li, L. Jacotot, N. Bertin, R. Janky, T. Moore, Hudson, J. L. Hartley, M. A. Brasch, J. Vandenhaute, S. Boulton, G. A. Endress, S. Jenna, E. Chevet, V. Papasotiropoulos, P. P. Tolias, J. Ptacek, M. Snyder, R. Huang, M. R. Chance, H. Lee, Doucette L. Stamm, D. E. Hill, M. Vidal posted to 0500 20030528 alternative animals caenorhabditis cloning complementarygenetics databases dna elegansgenetics exons expressed expression frames gene genes genetic genome genomics govt helminth helminthgenetics humans introns molecular non-us open phs proteinsgenetics proteome proteomics reading research sequence splicing support tags us by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:54 as
	Genome-wide detection of tissue-specific alternative splicing in the human transcriptome [My Copy] Nucleic Acids Res, Vol. 30, No. 17. (Sep 2002), pp. 3754-3766. by Q. Xu, B. Modrek, C. Lee posted to 0400 20021126 acid alternative amino biologystatistics brainmetabolism cdc42 computational data dna-binding expressed expression factorsgenetics female gene geneticgenetics genome govt gtp-binding homology human humans isoformsgenetics library male molecular non-phs numerical profiling protein proteingenetics proteinsgenetics research sequence splicinggenetics support tags transcription us by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:54 as
	ISIS, the intron information system, reveals the high frequency of alternative splicing in the human genome [My Copy] Nat Genet, Vol. 24, No. 4. (Apr 2000), pp. 340-341. by L. Croft, S. Schandorff, F. Clark, K. Burrage, P. Arctander, J. S. Mattick posted to 0900 20000508 alternative biology computational databases exonsgenetics expressed factualtrends frequency gene genome human humans intronsgenetics isoformsgenetics messengergenetics protein rna sequence splicinggenetics tags by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:53 as
	Gene structure prediction and alternative splicing analysis using genomically aligned ESTs [My Copy] Genome Res, Vol. 11, No. 5. (May 2001), pp. 889-900. by Z. Kan, E. C. Rouchka, W. R. Gish, D. J. States posted to 1001 20010629 alignmentinstrumentationmethods alternative biologyinstrumentationmethods comparative computational expressed genes genetic genome govt human humans messengermetabolism non-phs phs research rna sequence software splicinggenetics structuralgenetics study support tags transcription us validation by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:53 as
	In silico screening for tumour-specific expressed sequences in human genome [My Copy] FEBS Lett, Vol. 508, No. 1. (Nov 2001), pp. 143-148. by A. V. Baranova, A. V. Lobashev, D. V. Ivanov, L. L. Krukovskaya, N. K. Yankovsky, A. P. Kozlov posted to 1001 20020105 databases expressed expression gene genes genetic genome human humans library neoplasm neoplasmsgenetics profilingmethods sequence structural tags by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:53 as
	How prevalent is functional alternative splicing in the human genome? [My Copy] Trends Genet, Vol. 20, No. 2. (Feb 2004), pp. 68-71. by R. Sorek, R. Shamir, G. Ast posted to 0500 20040310 alternative comparative evolution exons expressed genetic genome human humans introns models molecular rna sequence sites splice splicinggenetics study tags by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:53 as
	Alternative splicing and genome complexity [My Copy] Nat Genet, Vol. 30, No. 1. (Jan 2002), pp. 29-30. by D. Brett, H. Pospisil, J. Valcarcel, J. Reich, P. Bork posted to 1001 20020205 alternative animals cattle expressed geneticsgenetics genome humans messengergenetics mice rats rna sequence splicing tags variation by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:53 as
	Alternative splicing of conserved exons is frequently species-specific in human and mouse [My Copy] Trends Genet, Vol. 21, No. 2. (Feb 2005), pp. 73-77. by Q. Pan, M. A. Bakowski, Q. Morris, et al.W. Zhang, B. J. Frey, T. R. Hughes, B. J. Blencowe posted to 0900 20050409 alternative animals exons expressed genetic genome govt humans mice models non-us protein research sequence software species specificity splicing structure support tags tertiary by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:53 as
	Alternative splicing, the gene concept, and evolution [My Copy] Hist Philos Life Sci, Vol. 26, No. 1. (2004) by S. M. Downes posted to 0900 20050511 alternative animals biology concept evolution formation genes genome human humans molecular philosophy splicinggenetics by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:52 as
	Dark matter in the genome: evidence of widespread transcription detected by microarray tiling experiments [My Copy] Trends Genet, Vol. 21, No. 2. (Feb 2005), pp. 93-102. by J. M. Johnson, S. Edwards, D. Shoemaker, E. E. Schadt posted to 0900 20050409 22 analysismethods animals antisensechemistry array biology chromosomes complementarymetabolism computational dna exons genetic genome human humans introns isoforms messengerchemistrymetabolism models oligonucleotide oligonucleotides pair protein rna sequence software statistics transcription by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:50 as
	Empirical analysis of transcriptional activity in the Arabidopsis genome [My Copy] Science, Vol. 302, No. 5646. (Oct 2003), pp. 842-846. by K. Yamada, J. Lim, J. M. Dale, et al.H. Chen, P. Shinn, C. J. Palm, A. M. Southwick, H. C. Wu, C. Kim, M. Nguyen, P. Pham, R. Cheuk, Karlin G. Newmann, S. X. Liu, B. Lam, H. Sakano, T. Wu, G. Yu, M. Miranda, H. L. Quach, M. Tripp, C. H. Chang, J. M. Lee, M. Toriumi, M. M. Chan, C. C. Tang, C. S. Onodera, J. M. Deng, K. Akiyama, Y. Ansari, T. Arakawa, J. Banh, F. Banno, L. Bowser, S. Brooks, P. Carninci, Q. Chao, N. Choy, A. Enju, A. D. Goldsmith, M. Gurjal, N. F. Hansen, Y. Hayashizaki, Johnson C. Hopson, V. W. Hsuan, K. Iida, M. Karnes, S. Khan, E. Koesema, J. Ishida, P. X. Jiang, T. Jones, J. Kawai, A. Kamiya, C. Meyers, M. Nakajima, M. Narusaka, M. Seki, T. Sakurai, M. Satou, R. Tamse, M. Vaysberg, E. K. Wallender, C. Wong, Y. Yamamura, S. Yuan, K. Shinozaki, R. W. Davis, A. Theologis, J. R. Ecker posted to 0500 20031210 acid analysis arabidopsisgenetics array biology chain chromosome chromosomes cloning complementarygenetics computational dna expressed expression frames gene genes genetic genome genomics govt hybridization intergenic mapping messengergenetics molecular non-phs non-us nucleic oligonucleotide open plant plantgenetics polymerase profiling reaction reading research reverse rna sequence support tags transcriptase transcription us by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:49 as
	Global identification of human transcribed sequences with genome tiling arrays [My Copy] Science, Vol. 306, No. 5705. (Dec 2004), pp. 2242-2246. by P. Bertone, V. Stolc, T. E. Royce, et al.J. S. Rozowsky, A. E. Urban, X. Zhu, J. L. Rinn, W. Tongprasit, M. Samanta, S. Weissman, M. Gerstein, M. Snyder posted to 0900 20050120 acid analysismethods animals array base biology chain complementary computational conserved cpg databases dna exons genetic genome govt homology human humans hybridization intergenic introns islands messengergenetics mice nucleic of oligonucleotide phs polymerase probes proteinschemistrygenetics reaction reproducibility research results reverse rna sequence support transcriptase transcription us by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:47 as
	Experimental annotation of the human genome using microarray technology [My Copy] Nature, Vol. 409, No. 6822. (Feb 2001), pp. 922-927. by D. D. Shoemaker, E. E. Schadt, C. D. Armour, et al.Y. D. He, Garrett P. Engele, P. D. Mcdonagh, P. M. Loerch, A. Leonardson, P. Y. Lum, G. Cavet, L. F. Wu, S. J. Altschuler, S. Edwards, J. King, J. S. Tsang, G. Schimmack, J. M. Schelter, J. Koch, M. Ziman, M. J. Marton, B. Li, P. Cundiff, T. Ward, J. Castle, M. Krolewski, M. R. Meyer, M. Mao, J. Burchard, M. J. Kidd, H. Dai, J. W. Phillips, P. S. Linsley, R. Stoughton, S. Scherer, M. S. Boguski posted to 1001 20010327 22 algorithms alternative analysis array biology cell chromosomes complementary computational dna exons genome human humans line oligonucleotide pair probes project sequence splicing by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:46 as
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evolution	549
human	300
bioinformatics	192
annotation	179
sequence	178
review	154
bacteria	150
genomics	139
sequencing	136
software	126
gene	118
dna	108
genetics	87
alignment	86
yeast	84
cancer	81
assembly	78
phylogeny	76
transcription	73
database	71
selection	71
variation	71
drosophila	70
expression	68
network	64
chromatin	63
methods	63
protein	63
rna	63
biology	56
browser	55
snp	55
fungi	54
nematode	54
analysis	52
comparative	52
genes	52
wide	51
elegans	49
genome-sequencing	49
celegans	48
c_elegans	45
mouse	44
primates	43
caenorhabditis_elegans	42
microarray	42
prediction	42
wormbase	42
motif	41
phylogenomics	41
duplication	40
association	38
mapping	38
metagenomics	38
promoter	38
histone	37
nucleosome	37
mammals	36
ncrna	36
statistics	36
plant	35
cnv	34
comparative_genomics	34
synteny	34
function	33
article	32
adaptation	31
data-mining	31
454	30
proteome	30
disease	29
methylation	29
transcriptome	29
arabidopsis	28
mutation	28
visualisation	28
algorithms	27
epigenetics	27
next_generation	27
pathogen	27
transposon	27
databases	26
algorithm	25
animals	25
noncoding	25
regulation	25
research	25
virus	25
computational	24
genetic	24
humans	24
interactions	24
regulatory	24
tiling	24
development	23
phenotype	23
polymorphism	23
structure	23
whole	23
conservation	22

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