Group: Bioinformatics - with tag introns [27 articles] Export

Recent papers posted by members of the Bioinformatics group with tag introns

	A non-EST-based method for exon-skipping prediction [My Copy] Genome Res, Vol. 14, No. 8. (Aug 2004), pp. 1617-1623. by R. Sorek, R. Shemesh, Y. Cohen, O. Basechess, G. Ast, R. Shamir posted to 0500 20040924 acid alternative animals biologymethods comparative computational databases exons expressed genetic genome human humans introns messengergenetics mice models nucleic rna sequence splicing study tags by kaspermunch to the group Bioinformatics on 2006-11-02 10:09:02 as
	Computational analysis of full-length mouse cDNAs compared with human genome sequences [My Copy] Mamm Genome, Vol. 12, No. 9. (Sep 2001), pp. 673-677. by S. Kondo, A. Shinagawa, T. Saito, et al.H. Kiyosawa, I. Yamanaka, K. Aizawa, S. Fukuda, A. Hara, M. Itoh, J. Kawai, K. Shibata, Y. Hayashizaki posted to 1001 20020105 acid algorithms analysis animals biologymethods comparative complementarygenetics computational data databases dna dnamethods exons factual genome govt homology human humans introns mice molecular non-us nucleic research sequence study support by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:59 as
	C. elegans ORFeome version 1.1: experimental verification of the genome annotation and resource for proteome-scale protein expression [My Copy] Nat Genet, Vol. 34, No. 1. (May 2003), pp. 35-41. by J. Reboul, P. Vaglio, J. F. Rual, et al.P. Lamesch, M. Martinez, C. M. Armstrong, S. Li, L. Jacotot, N. Bertin, R. Janky, T. Moore, Hudson, J. L. Hartley, M. A. Brasch, J. Vandenhaute, S. Boulton, G. A. Endress, S. Jenna, E. Chevet, V. Papasotiropoulos, P. P. Tolias, J. Ptacek, M. Snyder, R. Huang, M. R. Chance, H. Lee, Doucette L. Stamm, D. E. Hill, M. Vidal posted to 0500 20030528 alternative animals caenorhabditis cloning complementarygenetics databases dna elegansgenetics exons expressed expression frames gene genes genetic genome genomics govt helminth helminthgenetics humans introns molecular non-us open phs proteinsgenetics proteome proteomics reading research sequence splicing support tags us by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:54 as
	How prevalent is functional alternative splicing in the human genome? [My Copy] Trends Genet, Vol. 20, No. 2. (Feb 2004), pp. 68-71. by R. Sorek, R. Shamir, G. Ast posted to 0500 20040310 alternative comparative evolution exons expressed genetic genome human humans introns models molecular rna sequence sites splice splicinggenetics study tags by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:53 as
	The transcriptional activity of human Chromosome 22 [My Copy] Genes Dev, Vol. 17, No. 4. (Feb 2003), pp. 529-540. by J. L. Rinn, G. Euskirchen, P. Bertone, et al.R. Martone, N. M. Luscombe, S. Hartman, P. M. Harrison, F. K. Nelson, P. Miller, M. Gerstein, S. Weissman, M. Snyder posted to 0500 20030328 22 a acid amino analysis animals array chromosomes conserved data databases female genetic govt human humans internet introns mice molecular non-us oligonucleotide pair phs placentaphysiology poly research sequence support transcription us by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:51 as
	Dark matter in the genome: evidence of widespread transcription detected by microarray tiling experiments [My Copy] Trends Genet, Vol. 21, No. 2. (Feb 2005), pp. 93-102. by J. M. Johnson, S. Edwards, D. Shoemaker, E. E. Schadt posted to 0900 20050409 22 analysismethods animals antisensechemistry array biology chromosomes complementarymetabolism computational dna exons genetic genome human humans introns isoforms messengerchemistrymetabolism models oligonucleotide oligonucleotides pair protein rna sequence software statistics transcription by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:50 as
	Global identification of human transcribed sequences with genome tiling arrays [My Copy] Science, Vol. 306, No. 5705. (Dec 2004), pp. 2242-2246. by P. Bertone, V. Stolc, T. E. Royce, et al.J. S. Rozowsky, A. E. Urban, X. Zhu, J. L. Rinn, W. Tongprasit, M. Samanta, S. Weissman, M. Gerstein, M. Snyder posted to 0900 20050120 acid analysismethods animals array base biology chain complementary computational conserved cpg databases dna exons genetic genome govt homology human humans hybridization intergenic introns islands messengergenetics mice nucleic of oligonucleotide phs polymerase probes proteinschemistrygenetics reaction reproducibility research results reverse rna sequence support transcriptase transcription us by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:47 as
	Identification of protein coding regions in genomic DNA [My Copy] J Mol Biol, Vol. 248, No. 1. (Apr 1995), pp. 1-18. by E. E. Snyder, G. D. Stormo posted to 0001 19950421 base biosynthesis comparative composition computer dnachemistrymetabolism exons genes govt humans introns models non-phs of phs protein proteinsgenetics reproducibility research results sequence simulation software statistical study support us by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:36 as
	Predictive identification of exonic splicing enhancers in human genes [My Copy] Science, Vol. 297, No. 5583. (Aug 2002), pp. 1007-1013. by W. G. Fairbrother, R. F. Yeh, P. A. Sharp, C. B. Burge posted to 1001 20020829 acid analysis biology complementary computational consensus databases dna exons genes genome govt human humans hypoxanthine introns mutation non-us nucleic oligonucleotidesgenetics phosphoribosyltransferasegenetics phs point regulatory research rna sequence sequences splicing support us by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:23 as
	GlimmerM, Exonomy and Unveil: three ab initio eukaryotic genefinders [My Copy] Nucleic Acids Res, Vol. 31, No. 13. (Jul 2003), pp. 3601-3604. by W. H. Majoros, M. Pertea, C. Antonescu, S. L. Salzberg posted to 0500 20030819 analysis arabidopsisgenetics cells chains dnamethods eukaryotic exons genes govt internet introns markov non-phs phs plant research sequence software support us by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:21 as
	Closing in on the C. elegans ORFeome by cloning TWINSCAN predictions [My Copy] Genome Res, Vol. 15, No. 4. (Apr 2005), pp. 577-582. by C. Wei, P. Lamesch, M. Arumugam, et al.J. Rosenberg, P. Hu, M. Vidal, M. R. Brent posted to 0900 20050505 and animals biologymethods caenorhabditis cloning comparative computational databases elegansgenetics framesgenetics genes genetic genome genomics govt helminthgenetics introns molecularmethods non-phs open phs reading research sensitivity specificity study support us by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:13 as
	Recent advances in gene structure prediction [My Copy] Curr Opin Struct Biol, Vol. 14, No. 3. (Jun 2004), pp. 264-272. by M. R. Brent, R. Guigo posted to 0900 20041230 acid animals base conformation exons genes genomicstrends govt humans introns models molecular non-phs non-us nucleic phs proteinschemistrygeneticsmetabolism research sequence support us by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:12 as
	A gene expression map for the euchromatic genome of Drosophila melanogaster [My Copy] Science, Vol. 306, No. 5696. (Oct 2004), pp. 655-660. by V. Stolc, Z. Gauhar, C. Mason, et al.G. Halasz, M. F. van Batenburg, S. A. Rifkin, S. Hua, T. Herreman, W. Tongprasit, P. E. Barbano, H. J. Bussemaker, K. P. White posted to 0900 20041216 algorithms analysis animals array biology computational cycle development dna drosophila drosophilagenetics evolution exons expression female gene genes genetic genome govt insect intergenic introns life male melanogastergeneticsgrowth molecular non-phs non-us oligonucleotide phs probes profiling proteinsgeneticsphysiology research rna sequence splicing stages support synteny transcription us by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:04 as
	A generalized hidden Markov model for the recognition of human genes in DNA [My Copy] Proc Int Conf Intell Syst Mol Biol, Vol. 4 (1996), pp. 134-142. by D. Kulp, D. Haussler, M. G. Reese, F. H. Eeckman posted to 0001 19960101 chains chromosomes deletion dnachemistry exons genetic govt humanchemistry humans introns markov models non-phs research sequence software support us by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:55 as
	Exon recognition in vertebrate splicing [My Copy] J Biol Chem, Vol. 270, No. 6. (Feb 1995), pp. 2411-2414. by S. M. Berget posted to 0001 19950210 animals elements enhancer exons genetics introns rna splicing vertebratesgenetics by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:54 as
	Prediction of complete gene structures in human genomic DNA [My Copy] J Mol Biol, Vol. 268, No. 1. (Apr 1997), pp. 78-94. by C. Burge, S. Karlin posted to 0001 19970425 analysis animals chains comparative data dna exons genes genetic genetics genome govt human introns markov models molecular non-phs phs probability promoter proteinsgenetics regions rna sequence software splicing study support us vertebratesgenetics by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:51 as
	AUGUSTUS: a web server for gene finding in eukaryotes [My Copy] Nucleic Acids Res, Vol. 32, No. Web Server issue. (Jul 2004), pp. W309-W312. by M. Stanke, R. Steinkamp, S. Waack, B. Morgenstern posted to 0500 20040821 animals chains drosophila genes genome genomics human interface internet introns markov melanogastergenetics software user-computer by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:46 as
	Evolution of alternative splicing: deletions, insertions and origin of functional parts of proteins from intron sequences [My Copy] Trends Genet, Vol. 19, No. 3. (Mar 2003), pp. 115-119. by F. A. Kondrashov, E. V. Koonin posted to 0500 20030605 acid alternative amino animals conserved data evolution genetic homology human introns isoformschemistrygenetics models molecular protein proteinschemistry sequence splicinggenetics structure tertiary by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:43 as
	Influence of intron length on alternative splicing of CD44 [My Copy] Mol Cell Biol, Vol. 18, No. 10. (Oct 1998), pp. 5930-5941. by M. V. Bell, A. E. Cowper, M. P. Lefranc, J. I. Bell, G. R. Screaton posted to 0001 19980919 alternative animals antigens cd44genetics cells cos exons govt human introns mice non-us purines splicing support by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:42 as
	Ultraconserved elements in the human genome [My Copy] Science, Vol. 304, No. 5675. (May 2004), pp. 1321-1325. by G. Bejerano, M. Pheasant, I. Makunin, et al.S. Stephen, W. J. Kent, J. S. Mattick, D. Haussler posted to 0500 20040616 acid alternative animals base biology chickensgenetics computational conformation conserved data dna dogsgenetics evolution exons expression gene genes genome govt human intergenic introns micegenetics molecular mutation non-us nucleic phs ratsgenetics regulation rnachemistrygeneticsmetabolism sequence splicing structural support takifugugenetics us by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:35 as
	Analysis and recognition of 5' UTR intron splice sites in human pre-mRNA [My Copy] Nucleic Acids Res, Vol. 32, No. 3. (2004), pp. 1131-1142. by E. Eden, S. Brunak posted to 0500 20040513 5 analysis computer data exons genetic govt human introns molecular networks neural non-us nucleotidesanalysis precursorschemistrymetabolism regionschemistrymetabolism rna rnamethods sequence sites splice support translation untranslated by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:34 as
	Non-coding RNAs: the architects of eukaryotic complexity [My Copy] EMBO Rep, Vol. 2, No. 11. (Nov 2001), pp. 986-991. by J. S. Mattick posted to 1001 20020131 animals cellsmetabolism chromatinmetabolism eukaryotic expression gene genetic genetics genome human introns phenotype rnageneticsmetabolismphysiology trans-activation transcription by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:33 as
	Radiation in the Cape flora and the phylogeny of peacock irises Moraea (Iridaceae) based on four plastid DNA regions. [My Copy] Mol Phylogenet Evol, Vol. 25, No. 2. (Nov 2002), pp. 341-60. by Peter Goldblatt, Vincent Savolainen, Obie Porteous, et al.Ivan Sostaric, Martyn Powell, Gail Reeves, John C. Manning, Timothy G. Barraclough, Mark W. Chase posted to 414315 acid allocation analysis angiosperms animals bacterial banks basilicum bayes biodiversity biological birds calibration carboxylase chain classification codon comparative cooperation data databases demography diterpenes dna ecosystem energy environment european evolution factors financial flavonoids fossils functions fungal genes genetic genetics genome geography govt hybridization insects intergenic international interpretation introns iridaceae lamiaceae likelihood linear mitochondrial models molecular non-phs non-us nucleic ocimum of phylogeny plant plants plastids pollen polymerase proteins random rays reaction regression reproducibility research results ribosomal ribulose-bisphosphate sequence solar spacer specimen states statistical study support temperature theorem time tobacco transpiration ultraviolet union united us variation bibtex-import by kehan to the group Bioinformatics on 2006-07-13 16:23:36 as along with 2 groups biodiversity_conservation GrassBase
	Darwin's abominable mystery: Insights from a supertree of the angiosperms. [My Copy] Proc. Natl. Acad. Sci. U. S. A., Vol. 101, No. 7. (Feb 2004), pp. 1904-9. by Jonathan T. Davies, Timothy G. Barraclough, Mark W. Chase, Pamela S. Soltis, Douglas E. Soltis, Vincent Savolainen posted to 14766971 acid analysis angiosperms animals banks basilicum bayes biodiversity biological calibration codon comparative data databases demography diterpenes dna energy environment evolution factors flavonoids fossils genetic genome geography govt intergenic introns lamiaceae linear mitochondrial models molecular non-phs non-us nucleic ocimum of phylogeny plant plastids pollen rays regression reproducibility research results sequence solar specimen study support temperature theorem time transpiration ultraviolet us bibtex-import by kehan to the group Bioinformatics on 2006-07-13 16:23:24 as along with 2 groups biodiversity_conservation GrassBase
	Clann: investigating phylogenetic information through supertree analyses. [My Copy] Bioinformatics, Vol. 21, No. 3. (Feb 2005), pp. 390-2. by C. J. Creevey, J. O. Mcinerney posted to 15374874 acid algorithms analysis animal animals artiodactyla bacteria bacterial biological biology carnivora classification climate cluster comparative computational computer computing data databases decision design dna dolphins drosophila environment evolution extramural female functions fungal fungi gene genetic genome genomics geography govt groups horizontal hybridization interpretation introns likelihood male mathematical models molecular nih non-phs non-us nucleic of pedigree phs phylogeny pinus plant plants population proteins regression reproduction research ribosomal roots ruminants saccharomyces seeds simulation software species specificity statistical study support transfer trees us variance whales bibtex-import by kehan to the group Bioinformatics on 2006-07-13 16:23:22 as along with 2 groups biodiversity_conservation GrassBase
	Does a tree-like phylogeny only exist at the tips in the prokaryotes? [My Copy] Proc Biol Sci, Vol. 271, No. 1557. (Dec 2004), pp. 2551-8. by Christopher J. Creevey, David A. Fitzpatrick, Gayle K. Philip, et al.Rhoda J. Kinsella, Mary J. O'Connell, Melissa M. Pentony, Simon A. Travers, Mark Wilkinson, James O. Mcinerney posted to 15615680 animal animals artiodactyla bacteria bacterial biology carnivora classification comparative computational computer data databases design dolphins drosophila evolution extramural female functions fungal fungi gene genetic genome genomics govt groups horizontal interpretation introns likelihood male models molecular nih non-phs non-us phs phylogeny plant plants population proteins research ribosomal ruminants saccharomyces simulation species specificity statistical study support transfer us whales bibtex-import by kehan to the group Bioinformatics on 2006-07-13 16:23:21 as along with 2 groups biodiversity_conservation GrassBase
	Molecular systematics, GISH and the origin of hybrid taxa in Nicotiana (Solanaceae). [My Copy] Ann Bot (Lond), Vol. 92, No. 1. (Jul 2003), pp. 107-27. by Mark W. Chase, Sandra Knapp, Antony V. Cox, et al.James J. Clarkson, Yelena Butsko, Jeffrey Joseph, Vincent Savolainen, Alex S. Parokonny posted to 12824072 acid analysis angiosperms animals banks basilicum bayes biodiversity biological calibration carboxylase chain classification codon comparative cooperation data databases demography diterpenes dna ecosystem energy environment european evolution factors financial flavonoids fossils genetic genetics genome geography govt hybridization intergenic international introns lamiaceae linear mitochondrial models molecular non-phs non-us nucleic ocimum of phylogeny plant plants plastids pollen polymerase proteins rays reaction regression reproducibility research results ribosomal ribulose-bisphosphate sequence solar spacer specimen states study support temperature theorem time tobacco transpiration ultraviolet union united us variation bibtex-import by kehan to the group Bioinformatics on 2006-07-13 16:23:17 as along with 2 groups biodiversity_conservation GrassBase

Note: You may cite this page as: http://www.citeulike.org/group/664/tag/introns

elegans	66
article	64
c_elegans	64
caenorhabditis_elegans	64
celegans	64
molecular_sequence_data	64
nematode	64
wormbase	64
base_sequence	56
amino_acid_sequence	50
caenorhabditis_genetics	38
cloning_molecular	28
evolution	28
restriction_mapping	26
sequence_homology_nucleic_acid	26
exons	22
caenorhabditis_elegans_genetics	20
dna_sequence	20
rna_splicing	20
rna_messenger_genetics	18
cloned_genes	16
transcription_genetic	14
genes_structural	12
sequence_alignment	12
sequence_homology_amino_acid	12
c42d82	10
collagen_genetics	10
genes	10
vit-2	10
mutation	9
chromosome_mapping	8
dna	8
dna_genetics	8
gene_rearrangement	8
genes_reiterated	8
genes_structural_helminth	8
helminth_proteins_chemistry	8
helminth_proteins_genetics	8
introns1	8
k07h86	8
protein_conformation	8
transcription	8
vit-6	8
act-1	6
act-4	6
caenorhabditis_enzymology	6
caenorhabditis_growth_and_development	6
caenorhabditis_physiology	6
collagen	6
f02a96	6
f11c33	6
f35d61	6
fem-1	6
gene_expression	6
gene_expression_regulation	6
genes_helminth	6
globin_genetics	6
glp-1	6
m03f42	6
macromolecular_systems	6
membrane_proteins_genetics	6
molecular_weight	6
polymerase_chain_reaction	6
protein_kinases_genetics	6
regulatory_sequences_nucleic_acid	6
rna_messenger_metabolism	6
rol-6	6
t01b77	6
t04c126	6
unc-54	6
genomics	5
human	5
noncoding	5
c03b1t1	4
c04f61	4
c30a57	4
col-19	4
cytosol_enzymology	4
dna_insertion_elements	4
dna_isolation_and_purification	4
enz-protein_kinase	4
evolutionary	4
expression	4
fem-3	4
gene	4
gene_family	4
globin_chemistry	4
myo-2	4
nematoda_genetics	4
phylogeny	4
recombinant_fusion_proteins_genetics	4
repetitive_sequences_nucleic_acid	4
rna_messenger_analysis	4
sdc-1	4
splicing	4
transformation_genetic	4
trna	4
vit-5	4
zk11931	4
zk2878	4

Group: Bioinformatics - with tag introns [27 articles] Export

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