Group: Bioinformatics - with tag models [73 articles] Export

Recent papers posted by members of the Bioinformatics group with tag models

	In vivo analysis of the model tyrosine aminotransferase gene reveals multiple sequential steps in glucocorticoid receptor action. [My Copy] Oncogene, Vol. 20, No. 24. (2001), pp. 3028-38. by T. Grange, L. Cappabianca, M. Flavin, H. Sassi, H. Thomassin posted to genome-chromatin tyrosine transaminasegeneticsmetabolism trans-activation support research receptors non-us models humans govt glucocorticoidphysiology genetics chromatingeneticsmetabolism biological animals by sameetmehta to the group Bioinformatics on 2007-01-31 02:57:49 as along with 1 group ProkaryoteInterestGroup
	Methyl-CpG binding protein MBD1 couples histone H3 methylation at lysine 9 by SETDB1 to DNA replication and chromatin assembly. [My Copy] Mol Cell, Vol. 15, No. 4. (2004), pp. 595-605. by S. A. Sarraf, I. Stancheva posted to macromolecular lysinemetabolism islands interferingmetabolism humans histonesmetabolism hela govt genetics gene factors dna-binding dna disassembly cpg chromatin cells carrier biological assembly and genome-chromatin two-hybrid transcription techniques system support substances small silencing s rna research replication regions proteinsmetabolism proteinsgeneticsmetabolism proteinsgenetics protein promoter phase non-us models methyltransferasesmetabolism methylation by sameetmehta to the group Bioinformatics on 2007-01-31 02:57:48 as along with 1 group ProkaryoteInterestGroup
	Cooperative interactions between epigenetic modifications and their function in the regulation of chromosome architecture. [My Copy] Bioessays, Vol. 25, No. 8. (2003), pp. 792-7. by F. Weissmann, F. Lyko posted to genome-chromatin support research non-us models methylation humans govt genetic epigenesis dna chromosomesgenetics animals by sameetmehta to the group Bioinformatics on 2007-01-31 02:57:46 as along with 1 group ProkaryoteInterestGroup
	The marks, mechanisms and memory of epigenetic states in mammals. [My Copy] Biochem J, Vol. 356, No. Pt 1. (2001), pp. 1-10. by V. K. Rakyan, J. Preis, H. D. Morgan, E. Whitelaw posted to methylation mammalsgenetics intercellular imprinting govt genomic genetic gene expression dosage dna compensation chromatinmetabolism animals and genome-chromatin support signaling research repressor regulation proteins peptides non-us models mice by sameetmehta to the group Bioinformatics on 2007-01-31 02:57:44 as along with 1 group ProkaryoteInterestGroup
	Solution structure of the SWIRM domain of human histone demethylase LSD1. [My Copy] Structure, Vol. 14, No. 3. (2006), pp. 457-68. by N. Tochio, T. Umehara, S. Koshiba, et al.M. Inoue, T. Yabuki, M. Aoki, E. Seki, S. Watanabe, Y. Tomo, M. Hanada, M. Ikari, M. Sato, T. Terada, T. Nagase, O. Ohara, M. Shirouzu, A. Tanaka, T. Kigawa, S. Yokoyama posted to specificity sequence research proteins protein oxidoreductases non-us n-demethylatingchemistrygenetics motifs molecular models histonesanalysismetabolism helix-turn-helix govt factorsanalysischemistry factors dna-binding disassembly data conformation chromatin assembly and amino acid genome-chromatin transcription time tertiary support substrate structure by sameetmehta to the group Bioinformatics on 2007-01-31 02:57:41 as along with 1 group ProkaryoteInterestGroup
	ATP-dependent chromatin remodeling and DNA double-strand break repair. [My Copy] Cell Cycle, Vol. 4, No. 8. (2005), pp. 1011-4. by H. van Attikum, S. M. Gasser posted to adenosine genome-chromatin triphosphatechemistry transcription support saccharomyces research repair recombination proteinschemistry phosphorylation nucleosomeschemistrymetabolism non-us models histoneschemistry govt genetic factorschemistry dnachemistry dna-binding dna disassembly damage chromatinchemistry chromatin cerevisiae biological assembly arabidopsismetabolism and by sameetmehta to the group Bioinformatics on 2007-01-31 02:57:17 as along with 1 group ProkaryoteInterestGroup
	Polycomb group complexes self-regulate imprinting of the Polycomb group gene MEDEA in Arabidopsis. [My Copy] Curr Biol, Vol. 16, No. 5. (2006), pp. 486-92. by P. E. Jullien, A. Katz, M. Oliva, N. Ohad, F. Berger posted to genome-chromatin us support silencing seedsgeneticsmetabolism research repressor regulation proteinsmetabolismphysiology proteinsgeneticsmetabolism protein processing post-translational plant non-us non-phs models methylation imprinting immunoprecipitation histonesmetabolism govt genomic genetic gene expression disassembly development chromatin assembly arabidopsisembryologygeneticsgrowth arabidopsis and by sameetmehta to the group Bioinformatics on 2007-01-31 02:57:11 as along with 1 group ProkaryoteInterestGroup
	A non-EST-based method for exon-skipping prediction [My Copy] Genome Res, Vol. 14, No. 8. (Aug 2004), pp. 1617-1623. by R. Sorek, R. Shemesh, Y. Cohen, O. Basechess, G. Ast, R. Shamir posted to 0500 20040924 acid alternative animals biologymethods comparative computational databases exons expressed genetic genome human humans introns messengergenetics mice models nucleic rna sequence splicing study tags by kaspermunch to the group Bioinformatics on 2006-11-02 10:09:02 as
	How prevalent is functional alternative splicing in the human genome? [My Copy] Trends Genet, Vol. 20, No. 2. (Feb 2004), pp. 68-71. by R. Sorek, R. Shamir, G. Ast posted to 0500 20040310 alternative comparative evolution exons expressed genetic genome human humans introns models molecular rna sequence sites splice splicinggenetics study tags by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:53 as
	Alternative splicing of conserved exons is frequently species-specific in human and mouse [My Copy] Trends Genet, Vol. 21, No. 2. (Feb 2005), pp. 73-77. by Q. Pan, M. A. Bakowski, Q. Morris, et al.W. Zhang, B. J. Frey, T. R. Hughes, B. J. Blencowe posted to 0900 20050409 alternative animals exons expressed genetic genome govt humans mice models non-us protein research sequence software species specificity splicing structure support tags tertiary by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:53 as
	Stochastic models inspired by hybridization theory for short oligonucleotide arrays [My Copy] J Comput Biol, Vol. 12, No. 6. (Jul 2005), pp. 882-893. by Z. Wu, R. A. Irizarry posted to 0900 20051019 acid algorithms analysismethods and array comparative data expression gene genetic hybridization interpretation messengergenetics models nucleic of oligonucleotide processes profilingmethods reproducibility results rna sensitivity sequence specificity statistical stochastic study by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:52 as
	Dark matter in the genome: evidence of widespread transcription detected by microarray tiling experiments [My Copy] Trends Genet, Vol. 21, No. 2. (Feb 2005), pp. 93-102. by J. M. Johnson, S. Edwards, D. Shoemaker, E. E. Schadt posted to 0900 20050409 22 analysismethods animals antisensechemistry array biology chromosomes complementarymetabolism computational dna exons genetic genome human humans introns isoforms messengerchemistrymetabolism models oligonucleotide oligonucleotides pair protein rna sequence software statistics transcription by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:50 as
	Human subtelomeres are hot spots of interchromosomal recombination and segmental duplication [My Copy] Nature, Vol. 437, No. 7055. (Sep 2005), pp. 94-100. by E. V. Linardopoulou, E. M. Williams, Y. Fan, C. Friedman, J. M. Young, B. J. Trask posted to 0900 20050913 acid animals base biology breakagegenetics chromosome chromosomes computational dna duplication extramural factors gene genetic geneticgenetics genome genomics govt homology human humangenetics humans models nih nucleic phs polymorphism primatesgenetics recombination repair research sequence support telomeregenetics time translocation us by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:41 as
	Identification of protein coding regions in genomic DNA [My Copy] J Mol Biol, Vol. 248, No. 1. (Apr 1995), pp. 1-18. by E. E. Snyder, G. D. Stormo posted to 0001 19950421 base biosynthesis comparative composition computer dnachemistrymetabolism exons genes govt humans introns models non-phs of phs protein proteinsgenetics reproducibility research results sequence simulation software statistical study support us by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:36 as
	Patterns of evolutionary constraints in intronic and intergenic DNA of Drosophila [My Copy] Genome Res, Vol. 14, No. 2. (Feb 2004), pp. 273-279. by D. L. Halligan, Eyre A. Walker, P. Andolfatto, P. D. Keightley posted to 0500 20040318 alignmentmethodsstatistics animals carlo comparative conserved data dna drosophila drosophilagenetics evolution frequencygenetics gene intergenicgenetics intronsgenetics melanogastergenetics method models molecular monte numerical sequence sequencegenetics statistical study by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:30 as
	Finding genes in DNA with a Hidden Markov Model [My Copy] J Comput Biol, Vol. 4, No. 2. (Sum 1997), pp. 127-141. by J. Henderson, S. Salzberg, K. H. Fasman posted to 0001 19970701 algorithms and animals chains comparative databases dnagenetics exons factual genes genetic govt markov models non-phs of phs reproducibility research results sensitivity software specificity study support us vertebratesgenetics by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:27 as
	Improved microbial gene identification with GLIMMER [My Copy] Nucleic Acids Res, Vol. 27, No. 23. (Dec 1999), pp. 4636-4641. by A. L. Delcher, D. Harmon, S. Kasif, O. White, S. L. Salzberg posted to 0001 19991111 algorithms bacterial chains genes genetic govt markov models non-phs phs research support techniquesstandards us by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:17 as
	GAZE: a generic framework for the integration of gene-prediction data by dynamic programming [My Copy] Genome Res, Vol. 12, No. 9. (Sep 2002), pp. 1418-1427. by K. L. Howe, T. Chothia, R. Durbin posted to 0400 20021031 acid algorithms alignment and animals biologymethodsstatistics caenorhabditis comparative computational data databases elegansgenetics factual forecastingmethods genes genetic genome govt helminthgenetics homology information internet models non-us nucleic numerical probability research retrievalstatistics rna sequence sites software storage structural study support tagged trans-splicinggenetics by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:15 as
	Recent advances in gene structure prediction [My Copy] Curr Opin Struct Biol, Vol. 14, No. 3. (Jun 2004), pp. 264-272. by M. R. Brent, R. Guigo posted to 0900 20041230 acid animals base conformation exons genes genomicstrends govt humans introns models molecular non-phs non-us nucleic phs proteinschemistrygeneticsmetabolism research sequence support us by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:12 as
	Integrating genomic homology into gene structure prediction [My Copy] Bioinformatics, Vol. 17 Suppl 1 (2001), pp. S140-S148. by I. Korf, P. Flicek, D. Duan, M. R. Brent posted to 1001 20020228 acid algorithms alignmentstatistics and animals base biology comparative computational conserved data dnagenetics evolution genome govt homology human humans mice models molecular non-phs non-us nucleic numerical phs research sensitivity sequence specificity statistical study support us by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:11 as
	Begin at the beginning: predicting genes with 5' UTRs [My Copy] Genome Res, Vol. 15, No. 5. (May 2005), pp. 742-747. by R. H. Brown, S. S. Gross, M. R. Brent posted to dna evaluation exonsgenetics extramural genesgenetics genetic genome genomicsmethods govt human humans initiation models molecular nih phs regionsgenetics research sequence 0900 20050610 5 analysis base biologymethods computational data site studies support transcription untranslated us by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:09 as
	EasyGene--a prokaryotic gene finder that ranks ORFs by statistical significance [My Copy] BMC Bioinformatics, Vol. 4, No. 1. (Jun 2003) by T. S. Larsen, A. Krogh posted to non-us numerical 20031206 and bacillus bacterial bacterialgenetics binding biologymethodsstatistics chains coli coligenetics comparative computational data escherichia framesgenetics genes genetic genome govt helicobacter markov models mycobacterium predictive proteinschemistrygenetics pylorigenetics reading research ribosomeschemistrygenetics sensitivity sitesgenetics specificity statistical structural study subtilisgenetics support tests tuberculosisgenetics value 0500 of open by kaspermunch to the group Bioinformatics on 2006-11-02 10:07:59 as
	Evaluation of gene prediction software using a genomic data set: application to Arabidopsis thaliana sequences [My Copy] Bioinformatics, Vol. 15, No. 11. (Nov 1999), pp. 887-899. by N. Pavy, S. Rombauts, P. Dehais, et al.C. Mathe, D. V. Ramana, P. Leroy, P. Rouze posted to alternative contig dnamethods exonsgenetics sequence splicinggenetics study 20000608 computational evaluation reproducibility software studies support comparative mappingmethods 0900 arabidopsisgenetics genetic govt of protein research results validation analysis biologymethods databases factual genome models non-us plant by kaspermunch to the group Bioinformatics on 2006-11-02 10:07:26 as
	Hidden Markov models for sequence analysis: extension and analysis of the basic method [My Copy] Comput Appl Biosci, Vol. 12, No. 2. (Apr 1996), pp. 95-107. by R. Hughey, A. Krogh posted to amino factual models 0001 algorithms chains studies alignmentmethodsstatistics evaluation govt homology non-us sequence acid analysismethodsstatistics data domainsgenetics humans markov numerical src statistical support us 19960401 animals base databases non-phs research software by kaspermunch to the group Bioinformatics on 2006-11-02 10:07:09 as
	Comparative ab initio prediction of gene structures using pair HMMs [My Copy] Bioinformatics, Vol. 18, No. 10. (Oct 2002), pp. 1309-1318. by I. M. Meyer, R. Durbin posted to databases software specificity alignmentmethods chains mice sequence 0500 algorithms comparative exonsgenetics expression genetic models regulation analysis animals markov proteomicsmethods research study 20030506 acid and dnamethods gene govt humans non-us nucleic of reproducibility results sensitivity support by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:59 as
	Gene finding with a hidden Markov model of genome structure and evolution [My Copy] Bioinformatics, Vol. 19, No. 2. (Jan 2003), pp. 219-227. by J. S. Pedersen, J. Hein posted to 0500 20030828 algorithms alignmentmethods analysis animals chains computer dnamethods evolution genetic genome govt homology humans markov mice models molecular non-us phylogeny processes research sequence simulation statistical stochastic support by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:58 as
	Increase of functional diversity by alternative splicing [My Copy] Trends Genet, Vol. 19, No. 3. (Mar 2003), pp. 124-128. by E. V. Kriventseva, I. Koch, R. Apweiler, et al.M. Vingron, P. Bork, M. S. Gelfand, S. Sunyaev posted to 0500 20030605 acid acidsmetabolism alternative amino animals biology computational databases genetics humans isoformsanalysischemistry ligands models molecular protein selection sequence splicing structure tertiary by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:56 as
	How did alternative splicing evolve? [My Copy] Nat Rev Genet, Vol. 5, No. 10. (Oct 2004), pp. 773-782. by G. Ast posted to 0900 20041222 alternative base evolution genetic govt intronsgenetics messengergenetics models molecular non-us pairinggenetics research rna sitesgenetics splice splicinggenetics support by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:55 as
	A branch point consensus from Arabidopsis found by non-circular analysis allows for better prediction of acceptor sites [My Copy] Nucleic Acids Res, Vol. 25, No. 15. (Aug 1997), pp. 3159-3163. by N. Tolstrup, P. Rouze, S. Brunak posted to 0001 19970801 arabidopsisgenetics binding consensus dna genetic govt models non-us plant research sequence sites support by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:55 as
	A generalized hidden Markov model for the recognition of human genes in DNA [My Copy] Proc Int Conf Intell Syst Mol Biol, Vol. 4 (1996), pp. 134-142. by D. Kulp, D. Haussler, M. G. Reese, F. H. Eeckman posted to 0001 19960101 chains chromosomes deletion dnachemistry exons genetic govt humanchemistry humans introns markov models non-phs research sequence software support us by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:55 as
	Genie--gene finding in Drosophila melanogaster [My Copy] Genome Res, Vol. 10, No. 4. (Apr 2000), pp. 529-538. by M. G. Reese, D. Kulp, H. Tammana, D. Haussler posted to 0900 20000617 analysis animals biologymethods chains comparative computational databases dnamethods drosophila expressed factual genes genetic geneticsgenetics govt insectgenetics markov melanogastergenetics models non-phs phs promoter regions sequence software structural study support tags us by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:52 as
	Prediction of complete gene structures in human genomic DNA [My Copy] J Mol Biol, Vol. 268, No. 1. (Apr 1997), pp. 78-94. by C. Burge, S. Karlin posted to 0001 19970425 analysis animals chains comparative data dna exons genes genetic genetics genome govt human introns markov models molecular non-phs phs probability promoter proteinsgenetics regions rna sequence software splicing study support us vertebratesgenetics by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:51 as
	GeneMark.hmm: new solutions for gene finding [My Copy] Nucleic Acids Res, Vol. 26, No. 4. (Feb 1998), pp. 1107-1115. by A. V. Lukashin, M. Borodovsky posted to 0001 19980321 algorithms bacterial bacterialgenetics base chains coligenetics comparative databases dna escherichia evaluation factual genes genetic genome govt markov models phs sequence software studies study support us by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:51 as
	Heuristic approach to deriving models for gene finding [My Copy] Nucleic Acids Res, Vol. 27, No. 19. (Oct 1999), pp. 3911-3920. by J. Besemer, M. Borodovsky posted to 0001 19990911 1genetics bacterial cells chains codon eukaryotic evolution genes genetic genome govt hiv-1genetics human internet markov models molecular non-us phs support t-lymphotropic us viral virus by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:51 as
	Evaluation of gene-finding programs on mammalian sequences [My Copy] Genome Res, Vol. 11, No. 5. (May 2001), pp. 817-832. by S. Rogic, A. K. Mackworth, F. B. Ouellette posted to 1001 20010629 analysis animals base comparative composition cytosineanalysis dnamethods exonsgenetics functions genes genetic govt guanineanalysis human likelihood models non-us phylogeny sequence software species specificity structural study support by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:49 as
	PyEvolve: a toolkit for statistical modelling of molecular evolution [My Copy] BMC Bioinformatics, Vol. 5, No. 1. (Jan 2004) by A. Butterfield, V. Vedagiri, E. Lang, et al.C. Lawrence, M. J. Wakefield, A. Isaev, G. A. Huttley posted to 1000 20040621 animals benchmarkingstatistics comparative data design evolution functions genetic gorilla gorillagenetics govt human likelihood mice models molecular mutagenesisgenetics non-us numerical pan rats software softwarestatistics study support troglodytesgenetics by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:45 as
	Evolution of alternative splicing: deletions, insertions and origin of functional parts of proteins from intron sequences [My Copy] Trends Genet, Vol. 19, No. 3. (Mar 2003), pp. 115-119. by F. A. Kondrashov, E. V. Koonin posted to 0500 20030605 acid alternative amino animals conserved data evolution genetic homology human introns isoformschemistrygenetics models molecular protein proteinschemistry sequence splicinggenetics structure tertiary by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:43 as
	Two methods for improving performance of an HMM and their application for gene finding [My Copy] Proc Int Conf Intell Syst Mol Biol, Vol. 5 (1997), pp. 179-186. by A. Krogh posted to 0001 19971010 algorithms base chains comparative data databases dnagenetics evaluation factual functions genes genetic govt human likelihood markov models molecular non-us sequence studies study support by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:40 as
	Hidden neural networks [My Copy] Neural Comput, Vol. 11, No. 2. (Feb 1999), pp. 541-563. by A. Krogh, S. K. Riis posted to 0001 19990209 chains computer databases functions govt human likelihood markov models networks neural non-us pattern perception recognition speech statistical support by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:38 as
	Analysis of the role of Caenorhabditis elegans GC-AG introns in regulated splicing [My Copy] Nucleic Acids Res, Vol. 30, No. 15. (Aug 2002), pp. 3360-3367. by T. Farrer, A. B. Roller, W. J. Kent, A. M. Zahler posted to 1001 20020820 alternative animals base caenorhabditis conserved elegansgenetics genes genetic govt helminth helminthchemistrymetabolism intronsphysiology models phs rna sequence splicing support us by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:37 as
	Solving the riddle of the bright mismatches: labeling and effective binding in oligonucleotide arrays [My Copy] Phys Rev E Stat Nonlin Soft Matter Phys, Vol. 68, No. 1 Pt 1. (Jul 2003) by F. Naef, M. O. Magnasco posted to 0500 20040527 analysismethods array base biophysics biotinylation data human messengermetabolism models molecular oligonucleotide rna rnachemistry sequence statistical by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:32 as
	Ordered partitioning reveals extended splice-site consensus information [My Copy] Genome Res, Vol. 14, No. 1. (Jan 2004), pp. 67-78. by M. Weir, M. Rice posted to 0500 20040221 animals base biologymethods chromosome computational consensus databases drosophila genetic genome govt mapping melanogastergenetics mismatchgenetics models non-us pair rna sequencegenetics sitesgenetics splice support by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:31 as
	Pre-mRNA secondary structure prediction aids splice site prediction [My Copy] Pac Symp Biocomput (2002), pp. 223-234. by D. J. Patterson, K. Yasuhara, W. L. Ruzzo posted to 0400 20021003 acid analysis computer conformation exons functions genetic govt likelihood messengerchemistrygenetics models non-phs nucleic of precursorschemistry reproducibility results rna sequence simulation software splicing support us by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:20 as
	Radiation in the Cape flora and the phylogeny of peacock irises Moraea (Iridaceae) based on four plastid DNA regions. [My Copy] Mol Phylogenet Evol, Vol. 25, No. 2. (Nov 2002), pp. 341-60. by Peter Goldblatt, Vincent Savolainen, Obie Porteous, et al.Ivan Sostaric, Martyn Powell, Gail Reeves, John C. Manning, Timothy G. Barraclough, Mark W. Chase posted to 414315 acid allocation analysis angiosperms animals bacterial banks basilicum bayes biodiversity biological birds calibration carboxylase chain classification codon comparative cooperation data databases demography diterpenes dna ecosystem energy environment european evolution factors financial flavonoids fossils functions fungal genes genetic genetics genome geography govt hybridization insects intergenic international interpretation introns iridaceae lamiaceae likelihood linear mitochondrial models molecular non-phs non-us nucleic ocimum of phylogeny plant plants plastids pollen polymerase proteins random rays reaction regression reproducibility research results ribosomal ribulose-bisphosphate sequence solar spacer specimen states statistical study support temperature theorem time tobacco transpiration ultraviolet union united us variation bibtex-import by kehan to the group Bioinformatics on 2006-07-13 16:23:36 as along with 2 groups biodiversity_conservation GrassBase
	Resolution of a supertree/supermatrix paradox. [My Copy] Syst Biol, Vol. 51, No. 4. (Aug 2002), pp. 652-64. by John Gatesy, Conrad Matthee, Rob Desalle, Cheryl Hayashi posted to 14530139 algorithms alignment alligators analysis and angiosperms animals array artiodactyla b base bayes behavior biodiversity birds birth body calibration caloric carnivora chiroptera classification cluster comparative computer constitution crocodiles cytochrome data design dna ecology evolution factors feathers feeding fossils functions genetic genetics govt graphics group hibernation interface interpretation likelihood longevity meta-analysis mitochondrial models molecular mutational nesting non-phs non-us oligonucleotide paleontology pedigree phylogeny population rate re reproduction research restriction search sequence simulation snakes software species specificity statistical statistics study support theorem theoretical time us user-computer variation vertebrates bibtex-import by kehan to the group Bioinformatics on 2006-07-13 16:23:36 as along with 2 groups biodiversity_conservation GrassBase
	Hidden likelihood support in genomic data: can forty-five wrongs make a right? [My Copy] Syst Biol, Vol. 54, No. 3. (Jun 2005), pp. 483-92. by John Gatesy, Richard H. Baker posted to 16012113 animals artiodactyla biology classification comparative computational data dolphins evolution extramural female functions fungal genetic genome govt interpretation likelihood male models nih non-phs non-us phs phylogeny research saccharomyces species specificity statistical study support us whales bibtex-import by kehan to the group Bioinformatics on 2006-07-13 16:23:36 as along with 2 groups biodiversity_conservation GrassBase
	The granule-bound starch synthase (GBSSI) gene in the Rosaceae: multiple loci and phylogenetic utility. [My Copy] Mol Phylogenet Evol, Vol. 17, No. 3. (Dec 2000), pp. 388-400. by R. C. Evans, L. A. Alice, C. S. Campbell, E. A. Kellogg, T. A. Dickinson posted to 11133193 alignment analysis angiosperms animals arabidopsis base bayes behavior biology blotting cerevisiae chain chromosome classification cloning comparative composition computational conserved crosses cytoplasmic data developmental dna dna-binding dosage duplicate duplication evolution expression feeding flowers functions fungal gene genes genetic genetics genome genotype govt granules leaves likelihood loci mapping models molecular mutagenesis mutation non-phs non-us of phenotype phylogeny physiology plant plants poaceae polymerase polymorphism polyploidy primers proteins pseudogenes quantitative reaction regulation research ribosomal roots rubiaceae saccharomyces sequence setaria shoots southern spacer species specificity starch study support synteny synthase theorem trait us variance variation bibtex-import by kehan to the group Bioinformatics on 2006-07-13 16:23:34 as along with 2 groups biodiversity_conservation GrassBase
	Novel versus unsupported clades: assessing the qualitative support for clades in MRP supertrees. [My Copy] Syst Biol, Vol. 52, No. 6. (Dec 2003), pp. 839-48. by Olaf posted to 14668120 algorithms alignment alligators analysis and angiosperms animals array biodiversity calibration carnivora classification cluster comparative computer crocodiles data design dna evolution factors fossils genetic genetics govt graphics interface interpretation meta-analysis models molecular mutational non-phs non-us oligonucleotide pedigree phylogeny population re research search sequence simulation software statistical study support theoretical time us user-computer variation bibtex-import by kehan to the group Bioinformatics on 2006-07-13 16:23:28 as along with 2 groups biodiversity_conservation GrassBase
	Supertree construction in the genomic age. [My Copy] Methods Enzymol, Vol. 395 (2005), pp. 745-57. by Olaf posted to 15865993 animals artiodactyla biology carnivora classification comparative computational computer data databases design dolphins evolution extramural female functions fungal genetic genome genomics govt interpretation likelihood male models nih non-phs non-us phs phylogeny research ruminants saccharomyces simulation species specificity statistical study support us whales bibtex-import by kehan to the group Bioinformatics on 2006-07-13 16:23:28 as along with 2 groups biodiversity_conservation GrassBase
	Assessment of the accuracy of matrix representation with parsimony analysis supertree construction. [My Copy] Syst Biol, Vol. 50, No. 4. (Aug 2001), pp. 565-79. by Bininda O. R. Emonds, M. J. Sanderson posted to 12116654 algorithms alignment alligators analysis and angiosperms animals array artiodactyla b base bayes behavior biodiversity biometry birds birth body calibration caloric carnivora chiroptera classification cluster comparative computer consensus constitution crocodiles cytochrome data decision design dna ecology evolution factors feathers feeding fossils functions genetic genetics govt graphics group hibernation interface interpretation likelihood longevity meta-analysis mitochondrial models molecular multivariate mutational nesting non-phs non-us oligonucleotide paleontology pedigree phylogeny population rate re reproduction research restriction search sequence simulation snakes software species specificity statistical statistics study support theorem theoretical time trees us user-computer variation vertebrates bibtex-import by kehan to the group Bioinformatics on 2006-07-13 16:23:27 as along with 2 groups biodiversity_conservation GrassBase

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