Group: Bioinformatics - with tag statistical [27 articles] Export

Recent papers posted by members of the Bioinformatics group with tag statistical

	Stochastic models inspired by hybridization theory for short oligonucleotide arrays [My Copy] J Comput Biol, Vol. 12, No. 6. (Jul 2005), pp. 882-893. by Z. Wu, R. A. Irizarry posted to 0900 20051019 acid algorithms analysismethods and array comparative data expression gene genetic hybridization interpretation messengergenetics models nucleic of oligonucleotide processes profilingmethods reproducibility results rna sensitivity sequence specificity statistical stochastic study by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:52 as
	Identification of protein coding regions in genomic DNA [My Copy] J Mol Biol, Vol. 248, No. 1. (Apr 1995), pp. 1-18. by E. E. Snyder, G. D. Stormo posted to 0001 19950421 base biosynthesis comparative composition computer dnachemistrymetabolism exons genes govt humans introns models non-phs of phs protein proteinsgenetics reproducibility research results sequence simulation software statistical study support us by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:36 as
	Patterns of evolutionary constraints in intronic and intergenic DNA of Drosophila [My Copy] Genome Res, Vol. 14, No. 2. (Feb 2004), pp. 273-279. by D. L. Halligan, Eyre A. Walker, P. Andolfatto, P. D. Keightley posted to 0500 20040318 alignmentmethodsstatistics animals carlo comparative conserved data dna drosophila drosophilagenetics evolution frequencygenetics gene intergenicgenetics intronsgenetics melanogastergenetics method models molecular monte numerical sequence sequencegenetics statistical study by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:30 as
	Integrating genomic homology into gene structure prediction [My Copy] Bioinformatics, Vol. 17 Suppl 1 (2001), pp. S140-S148. by I. Korf, P. Flicek, D. Duan, M. R. Brent posted to 1001 20020228 acid algorithms alignmentstatistics and animals base biology comparative computational conserved data dnagenetics evolution genome govt homology human humans mice models molecular non-phs non-us nucleic numerical phs research sensitivity sequence specificity statistical study support us by kaspermunch to the group Bioinformatics on 2006-11-02 10:08:11 as
	EasyGene--a prokaryotic gene finder that ranks ORFs by statistical significance [My Copy] BMC Bioinformatics, Vol. 4, No. 1. (Jun 2003) by T. S. Larsen, A. Krogh posted to non-us numerical 20031206 and bacillus bacterial bacterialgenetics binding biologymethodsstatistics chains coli coligenetics comparative computational data escherichia framesgenetics genes genetic genome govt helicobacter markov models mycobacterium predictive proteinschemistrygenetics pylorigenetics reading research ribosomeschemistrygenetics sensitivity sitesgenetics specificity statistical structural study subtilisgenetics support tests tuberculosisgenetics value 0500 of open by kaspermunch to the group Bioinformatics on 2006-11-02 10:07:59 as
	Hidden Markov models for sequence analysis: extension and analysis of the basic method [My Copy] Comput Appl Biosci, Vol. 12, No. 2. (Apr 1996), pp. 95-107. by R. Hughey, A. Krogh posted to amino factual models 0001 algorithms chains studies alignmentmethodsstatistics evaluation govt homology non-us sequence acid analysismethodsstatistics data domainsgenetics humans markov numerical src statistical support us 19960401 animals base databases non-phs research software by kaspermunch to the group Bioinformatics on 2006-11-02 10:07:09 as
	Gene finding with a hidden Markov model of genome structure and evolution [My Copy] Bioinformatics, Vol. 19, No. 2. (Jan 2003), pp. 219-227. by J. S. Pedersen, J. Hein posted to 0500 20030828 algorithms alignmentmethods analysis animals chains computer dnamethods evolution genetic genome govt homology humans markov mice models molecular non-us phylogeny processes research sequence simulation statistical stochastic support by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:58 as
	Hidden neural networks [My Copy] Neural Comput, Vol. 11, No. 2. (Feb 1999), pp. 541-563. by A. Krogh, S. K. Riis posted to 0001 19990209 chains computer databases functions govt human likelihood markov models networks neural non-us pattern perception recognition speech statistical support by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:38 as
	Solving the riddle of the bright mismatches: labeling and effective binding in oligonucleotide arrays [My Copy] Phys Rev E Stat Nonlin Soft Matter Phys, Vol. 68, No. 1 Pt 1. (Jul 2003) by F. Naef, M. O. Magnasco posted to 0500 20040527 analysismethods array base biophysics biotinylation data human messengermetabolism models molecular oligonucleotide rna rnachemistry sequence statistical by kaspermunch to the group Bioinformatics on 2006-11-02 10:06:32 as
	Statistical Analysis of Crossover Interference Using the Chi-Square Model [My Copy] Genetics, Vol. 139, No. 2., 1045. by Zhao posted to genetics statistical by neveaire to the group Bioinformatics on 2006-07-13 20:33:17 as along with 3 groups Biostatistics Computational-Genomics Neuroscience
	Radiation in the Cape flora and the phylogeny of peacock irises Moraea (Iridaceae) based on four plastid DNA regions. [My Copy] Mol Phylogenet Evol, Vol. 25, No. 2. (Nov 2002), pp. 341-60. by Peter Goldblatt, Vincent Savolainen, Obie Porteous, et al.Ivan Sostaric, Martyn Powell, Gail Reeves, John C. Manning, Timothy G. Barraclough, Mark W. Chase posted to 414315 acid allocation analysis angiosperms animals bacterial banks basilicum bayes biodiversity biological birds calibration carboxylase chain classification codon comparative cooperation data databases demography diterpenes dna ecosystem energy environment european evolution factors financial flavonoids fossils functions fungal genes genetic genetics genome geography govt hybridization insects intergenic international interpretation introns iridaceae lamiaceae likelihood linear mitochondrial models molecular non-phs non-us nucleic ocimum of phylogeny plant plants plastids pollen polymerase proteins random rays reaction regression reproducibility research results ribosomal ribulose-bisphosphate sequence solar spacer specimen states statistical study support temperature theorem time tobacco transpiration ultraviolet union united us variation bibtex-import by kehan to the group Bioinformatics on 2006-07-13 16:23:36 as along with 2 groups biodiversity_conservation GrassBase
	Resolution of a supertree/supermatrix paradox. [My Copy] Syst Biol, Vol. 51, No. 4. (Aug 2002), pp. 652-64. by John Gatesy, Conrad Matthee, Rob Desalle, Cheryl Hayashi posted to 14530139 algorithms alignment alligators analysis and angiosperms animals array artiodactyla b base bayes behavior biodiversity birds birth body calibration caloric carnivora chiroptera classification cluster comparative computer constitution crocodiles cytochrome data design dna ecology evolution factors feathers feeding fossils functions genetic genetics govt graphics group hibernation interface interpretation likelihood longevity meta-analysis mitochondrial models molecular mutational nesting non-phs non-us oligonucleotide paleontology pedigree phylogeny population rate re reproduction research restriction search sequence simulation snakes software species specificity statistical statistics study support theorem theoretical time us user-computer variation vertebrates bibtex-import by kehan to the group Bioinformatics on 2006-07-13 16:23:36 as along with 2 groups biodiversity_conservation GrassBase
	Inconsistencies in arguments for the supertree approach: supermatrices versus supertrees of Crocodylia. [My Copy] Syst Biol, Vol. 53, No. 2. (Apr 2004), pp. 342-55. by John Gatesy, Richard H. Baker, Cheryl Hayashi posted to 15205059 alligators and animals classification comparative crocodiles data design interpretation meta-analysis phylogeny research statistical study bibtex-import by kehan to the group Bioinformatics on 2006-07-13 16:23:36 as along with 2 groups biodiversity_conservation GrassBase
	Hidden likelihood support in genomic data: can forty-five wrongs make a right? [My Copy] Syst Biol, Vol. 54, No. 3. (Jun 2005), pp. 483-92. by John Gatesy, Richard H. Baker posted to 16012113 animals artiodactyla biology classification comparative computational data dolphins evolution extramural female functions fungal genetic genome govt interpretation likelihood male models nih non-phs non-us phs phylogeny research saccharomyces species specificity statistical study support us whales bibtex-import by kehan to the group Bioinformatics on 2006-07-13 16:23:36 as along with 2 groups biodiversity_conservation GrassBase
	Performance of flip supertree construction with a heuristic algorithm. [My Copy] Syst Biol, Vol. 53, No. 2. (Apr 2004), pp. 299-308. by Oliver Eulenstein, Duhong Chen, Gordon J. Burleigh, David F. Baca, Michael J. Sanderson posted to 15205054 algorithms alligators and animals classification comparative computer crocodiles data design govt interpretation meta-analysis non-phs phylogeny research simulation statistical study support us bibtex-import by kehan to the group Bioinformatics on 2006-07-13 16:23:34 as along with 2 groups biodiversity_conservation GrassBase
	Novel versus unsupported clades: assessing the qualitative support for clades in MRP supertrees. [My Copy] Syst Biol, Vol. 52, No. 6. (Dec 2003), pp. 839-48. by Olaf posted to 14668120 algorithms alignment alligators analysis and angiosperms animals array biodiversity calibration carnivora classification cluster comparative computer crocodiles data design dna evolution factors fossils genetic genetics govt graphics interface interpretation meta-analysis models molecular mutational non-phs non-us oligonucleotide pedigree phylogeny population re research search sequence simulation software statistical study support theoretical time us user-computer variation bibtex-import by kehan to the group Bioinformatics on 2006-07-13 16:23:28 as along with 2 groups biodiversity_conservation GrassBase
	Supertree construction in the genomic age. [My Copy] Methods Enzymol, Vol. 395 (2005), pp. 745-57. by Olaf posted to 15865993 animals artiodactyla biology carnivora classification comparative computational computer data databases design dolphins evolution extramural female functions fungal genetic genome genomics govt interpretation likelihood male models nih non-phs non-us phs phylogeny research ruminants saccharomyces simulation species specificity statistical study support us whales bibtex-import by kehan to the group Bioinformatics on 2006-07-13 16:23:28 as along with 2 groups biodiversity_conservation GrassBase
	Assessment of the accuracy of matrix representation with parsimony analysis supertree construction. [My Copy] Syst Biol, Vol. 50, No. 4. (Aug 2001), pp. 565-79. by Bininda O. R. Emonds, M. J. Sanderson posted to 12116654 algorithms alignment alligators analysis and angiosperms animals array artiodactyla b base bayes behavior biodiversity biometry birds birth body calibration caloric carnivora chiroptera classification cluster comparative computer consensus constitution crocodiles cytochrome data decision design dna ecology evolution factors feathers feeding fossils functions genetic genetics govt graphics group hibernation interface interpretation likelihood longevity meta-analysis mitochondrial models molecular multivariate mutational nesting non-phs non-us oligonucleotide paleontology pedigree phylogeny population rate re reproduction research restriction search sequence simulation snakes software species specificity statistical statistics study support theorem theoretical time trees us user-computer variation vertebrates bibtex-import by kehan to the group Bioinformatics on 2006-07-13 16:23:27 as along with 2 groups biodiversity_conservation GrassBase
	A phylogenomic approach to bacterial phylogeny: evidence of a core of genes sharing a common history. [My Copy] Genome Res., Vol. 12, No. 7. (Jul 2002), pp. 1080-90. by Vincent Daubin, Manolo Gouy, Guy Perrière posted to 12097345 acid algorithms alignment alligators analysis and angiosperms animals array artiodactyla b bacterial base bayes behavior biodiversity biology biometry birds birth body calibration caloric carnivora chiroptera classification cluster comparative computational computer consensus constitution crocodiles cytochrome data decision design dna ecology evolution factors feathers feeding fossils functions genes genetic genetics genome govt graphics group hibernation homology interface interpretation likelihood longevity meta-analysis mitochondrial models molecular multivariate mutational nesting non-phs non-us nucleic oligonucleotide paleontology pedigree phylogeny population rate re reproduction research restriction search sequence simulation snakes software species specificity statistical statistics structural study support theorem theoretical time trees us user-computer variation vertebrates bibtex-import by kehan to the group Bioinformatics on 2006-07-13 16:23:23 as along with 2 groups biodiversity_conservation GrassBase
	Clann: investigating phylogenetic information through supertree analyses. [My Copy] Bioinformatics, Vol. 21, No. 3. (Feb 2005), pp. 390-2. by C. J. Creevey, J. O. Mcinerney posted to 15374874 acid algorithms analysis animal animals artiodactyla bacteria bacterial biological biology carnivora classification climate cluster comparative computational computer computing data databases decision design dna dolphins drosophila environment evolution extramural female functions fungal fungi gene genetic genome genomics geography govt groups horizontal hybridization interpretation introns likelihood male mathematical models molecular nih non-phs non-us nucleic of pedigree phs phylogeny pinus plant plants population proteins regression reproduction research ribosomal roots ruminants saccharomyces seeds simulation software species specificity statistical study support transfer trees us variance whales bibtex-import by kehan to the group Bioinformatics on 2006-07-13 16:23:22 as along with 2 groups biodiversity_conservation GrassBase
	Does a tree-like phylogeny only exist at the tips in the prokaryotes? [My Copy] Proc Biol Sci, Vol. 271, No. 1557. (Dec 2004), pp. 2551-8. by Christopher J. Creevey, David A. Fitzpatrick, Gayle K. Philip, et al.Rhoda J. Kinsella, Mary J. O'Connell, Melissa M. Pentony, Simon A. Travers, Mark Wilkinson, James O. Mcinerney posted to 15615680 animal animals artiodactyla bacteria bacterial biology carnivora classification comparative computational computer data databases design dolphins drosophila evolution extramural female functions fungal fungi gene genetic genome genomics govt groups horizontal interpretation introns likelihood male models molecular nih non-phs non-us phs phylogeny plant plants population proteins research ribosomal ruminants saccharomyces simulation species specificity statistical study support transfer us whales bibtex-import by kehan to the group Bioinformatics on 2006-07-13 16:23:21 as along with 2 groups biodiversity_conservation GrassBase
	The use and abuse of population viability analysis. [My Copy] Trends Ecol Evol, Vol. 16, No. 5. (May 2001), pp. 219-221. by T. Coulson, G. Mace, E. Hudson, H. Possingham posted to 11301139 and animals anthozoa biodiversity biological biology biomass chain conservation cooperation disasters dynamics ecology ecosystem effect environmental eutrophication fishes florida food govt greenhouse international invertebrates larva marine models monitoring natural non-phs non-us ocean of pacific phs plankton plants policy pollution population public research resources sensitivity specificity states statistical supply support theoretical thoracica united us water bibtex-import by kehan to the group Bioinformatics on 2006-07-13 16:23:21 as along with 2 groups biodiversity_conservation GrassBase
	Rainbow: a toolbox for phylogenetic supertree construction and analysis. [My Copy] Bioinformatics, Vol. 20, No. 16. (Nov 2004), pp. 2872-3. by D. Chen, O. Eulenstein, Fernández D. Baca posted to 15145807 algorithms alignment alligators analysis and animals array classification cluster comparative computer crocodiles data design dna govt graphics interface interpretation meta-analysis mutational non-phs oligonucleotide phylogeny research sequence simulation software statistical study support us user-computer bibtex-import by kehan to the group Bioinformatics on 2006-07-13 16:23:20 as along with 2 groups biodiversity_conservation GrassBase
	A phylogeny of the tinamous (aves: palaeognathiformes) based on integumentary characters. [My Copy] Syst Biol, Vol. 51, No. 6. (Dec 2002), pp. 959-79. by Sara Bertelli, Norberto P. Giannini, Pablo A. Goloboff posted to 12554461 algorithms alignment alligators analysis and angiosperms animals array b base bayes behavior biodiversity birds birth body calibration caloric carnivora chiroptera classification cluster comparative computer constitution crocodiles cytochrome data design dna ecology evolution factors feathers feeding fossils functions genetic genetics govt graphics group hibernation interface interpretation likelihood longevity meta-analysis mitochondrial models molecular mutational nesting non-phs non-us oligonucleotide paleontology pedigree phylogeny population rate re reproduction research restriction search sequence simulation snakes software species specificity statistical statistics study support theorem theoretical time us user-computer variation vertebrates bibtex-import by kehan to the group Bioinformatics on 2006-07-13 16:23:08 as along with 2 groups biodiversity_conservation GrassBase
	The genetic contribution of single male immigrants to small, inbred populations: a laboratory study using Drosophila melanogaster. [My Copy] Heredity, Vol. 84 ( Pt 6) (Jun 2000), pp. 677-84. by S. J. Ball, M. Adams, H. P. Possingham, M. A. Keller posted to 10886383 alleles and animals anthozoa biodiversity biological biology biomass chain conservation cooperation disasters drosophila dynamics ecology ecosystem effect environmental eutrophication fishes florida food frequency gene genetics govt greenhouse international invertebrates larva male marine melanogaster models monitoring natural non-phs non-us ocean of pacific phs plankton plants policy pollution population public research resources sensitivity specificity states statistical supply support theoretical thoracica united us water bibtex-import by kehan to the group Bioinformatics on 2006-07-13 16:22:58 as along with 2 groups biodiversity_conservation GrassBase
	Patch dynamics and metapopulation theory: the case of successional species. [My Copy] J Theor Biol, Vol. 209, No. 3. (Apr 2001), pp. 333-44. by P. Amarasekare, H. Possingham posted to 11312593 and animals anthozoa biodiversity biological biology biomass chain conservation cooperation disasters dynamics ecology ecosystem effect environmental eutrophication fishes florida food govt greenhouse international invertebrates larva marine models monitoring natural non-phs non-us ocean of pacific phs plankton plants policy pollution population public research resources sensitivity specificity states statistical supply support theoretical thoracica united us water bibtex-import by kehan to the group Bioinformatics on 2006-07-13 16:22:52 as along with 2 groups biodiversity_conservation GrassBase
	Inference of transcriptional regulatory network by two-stage constrained space factor analysis. [My Copy] Bioinformatics, Vol. 21, No. 21. (2005), pp. 4033-8. by T. Yu, K. C. Li posted to algorithms analysis automatedmethods computer expression factor factorsmetabolism gene genetic geneticsphysiology govt models non-phs pattern profilingmethods proteomemetabolism recognition regulationphysiology research signal simulation statistical support trans-activation transcription transductionphysiology us bibtex-import by sameetmehta to the group Bioinformatics on 2006-05-14 20:19:59 as along with 1 group ProkaryoteInterestGroup

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Group: Bioinformatics - with tag statistical [27 articles] Export

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