Group: Bioinformatics - with tag text-mining [43 articles] Export Sort

Recent papers posted by members of the Bioinformatics group with tag text-mining

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	Linking genes to literature: text mining, information extraction, and retrieval applications for biology. [My Copy] Genome biology, Vol. 9 Suppl 2, No. Suppl 2. (2008), S8. by Martin Krallinger, Alfonso Valencia, Lynette Hirschman posted to text-mining bioinformatics by svozil to the group Bioinformatics on 2009-12-25 19:20:50 as along with 14 people and 1 group artaban421 druvus satre daforerog mitko liblab lmichan aberamanda henk-cul Alois guhjy dullhunk bouncingbudha goettl dbmi-nlp
	Literature mining for the biologist: from information retrieval to biological discovery [My Copy] Nature Reviews Genetics, Vol. 7, No. 2. (01 February 2006), pp. 119-129. by Lars J. Jensen, Jasmin Saric, Peer Bork posted to text-mining bioinformatics by svozil to the group Bioinformatics on 2009-12-25 19:18:31 as along with 51 people and 4 groups wkretzsch mgaldino krapnik tanyacovi6 MARCOUNAM eudominguezmartin sm-rush LEONRANGEL artaban421 rocling bertelsen virolog dipenps druvus Zephyrus fgibson psique lmichan cisevol ilyashl henk-cul daforerog isimpson dansullivanblk yggdrasil Enro guhjy kuhn yas dullhunk hpiwowar dgront caporaso zlu jacky957 lynnefox jdiggans cjeans ghattem michaelmampaey dejori jandot mircea farzanehs larsjuhljensen adoms skumagai TheresaNiederberger satre akastrin ibuch BergmanLab T_lab biomedical-nlp ADMiRes
	Textquest: document clustering of Medline abstracts for concept discovery in molecular biology. [My Copy] Pac Symp Biocomput (2001), pp. 384-395. by I. Iliopoulos, A. J. Enright, C. A. Ouzounis posted to text_categorization text-mining bioinformatics by svozil to the group Bioinformatics on 2009-12-20 07:28:09 as along with 1 person and 1 group yas T_lab
	An effective general purpose approach for automated biomedical document classification. [My Copy] AMIA ... Annual Symposium proceedings / AMIA Symposium. AMIA Symposium (2006), pp. 161-165. by Aaron M. Cohen posted to text_categorization text-mining bioinformatics by svozil to the group Bioinformatics on 2009-12-20 07:25:24 as
	A coherent graph-based semantic clustering and summarization approach for biomedical literature and a new summarization evaluation method. [My Copy] BMC bioinformatics, Vol. 8 Suppl 9 (2007) by Illhoi Yoo, Xiaohua Hu, Il-Yeol Y. Song posted to text-mining graph_clustering graph bioinformatics by svozil to the group Bioinformatics on 2009-12-20 07:18:14 as along with 3 people Gaetan maralena guhjy
	Summarization from medical documents: a survey. [My Copy] Artificial intelligence in medicine, Vol. 33, No. 2. (February 2005), pp. 157-177. by Stergos Afantenos, Vangelis Karkaletsis, Panagiotis Stamatopoulos posted to text_summarization text-mining medical by svozil to the group Bioinformatics on 2009-12-20 07:02:33 as along with 6 people and 3 groups knowlengr camargoj yas helliontroy kkaiser ctl T_lab biomedical-nlp IEG
	The effect of feature representation on MEDLINE document classification. [My Copy] AMIA ... Annual Symposium proceedings / AMIA Symposium. AMIA Symposium (2005), pp. 849-853. by Meliha Yetisgen-Yildiz, Wanda Pratt posted to text_categorization text-mining by svozil to the group Bioinformatics on 2009-12-20 06:53:36 as along with 1 person akastrin
	Automatic document classification of biological literature. [My Copy] BMC bioinformatics, Vol. 7, No. 1. (07 August 2006), 370. by David Chen, Hans-Michael M. Müller, Paul W. Sternberg posted to text_categorization text-mining svm clustering bioinformatics by svozil to the group Bioinformatics on 2009-12-20 06:38:06 as along with 8 people and 3 groups druvus thegoose2 liblab tharris irenas Enro yas ananthrk C. elegans / WormBase dbk-lab T_lab
	Combining NLP and probabilistic categorisation for document and term selection for Swiss-Prot medical annotation. [My Copy] Bioinformatics (Oxford, England), Vol. 19 Suppl 1 (2003) by Pavel B. Dobrokhotov, Cyril Goutte, Anne-Lise L. Veuthey, Eric Gaussier posted to text_categorization text-mining swiss_prot bioinformatics by svozil to the group Bioinformatics on 2009-12-20 06:31:45 as along with 2 people and 2 groups irenas yas dbk-lab T_lab
	PreBIND and Textomy--mining the biomedical literature for protein-protein interactions using a support vector machine. [My Copy] BMC bioinformatics, Vol. 4 (27 March 2003) by Ian Donaldson, Joel Martin, Berry de Bruijn, et al.Cheryl Wolting, Vicki Lay, Brigitte Tuekam, Shudong Zhang, Berivan Baskin, Gary D. Bader, Katerina Michalickova, Tony Pawson, Christopher W. Hogue posted to text_categorization text-mining svm protein-protein bioinformatics by svozil to the group Bioinformatics on 2009-12-20 06:28:34 as along with 6 people and 2 groups henk-cul Effie chad_davis blackbart satre bouncingbudha dbmi-nlp NaCTeM
	Text Categorization with Support Vector Machines: Learning with Many Relevant Features [My Copy] (1997) by Thorsten Joachims, Fachbereich Informatik, Fachbereich Informatik, Fachbereich Informatik, Fachbereich Informatik, Lehrstuhl Viii posted to text_categorization text-mining by svozil to the group Bioinformatics on 2009-12-20 06:23:46 as
	Automated Learning of Decision Rules for Text Categorization [My Copy] ACM Transactions on Information Systems, Vol. 12 (1994), pp. 233-251. by C. Apte, F. Damerau, S. M. Weiss, Chidanand Apte, Fred Damerau, Sholom M. Weiss posted to text_categorization text-mining by svozil to the group Bioinformatics on 2009-12-20 06:21:41 as along with 1 person resilla
	A comparison of event models for Naive Bayes text classification [My Copy] In IN AAAI-98 WORKSHOP ON LEARNING FOR TEXT CATEGORIZATION (1998), pp. 41-48. by Andrew McCallum, Kamal Nigam posted to text_categorization text-mining by svozil to the group Bioinformatics on 2009-12-20 06:20:26 as
	Automating document classification for the Immune Epitope Database [My Copy] BMC Bioinformatics, Vol. 8, No. 1. (26 July 2007), 269. by Peng Wang, Alexander Morgan, Qing Zhang, Alessandro Sette, Bjoern Peters posted to text_categorization text-mining bioinformatics by svozil to the group Bioinformatics on 2009-12-20 06:16:46 as along with 2 people mijogiffin etaylorg
	Machine Learning in Automated Text Categorization [My Copy] ACM Computing Surveys, Vol. 34 (2002), pp. 1-47. by Fabrizio Sebastiani, Consiglio N. Delle Ricerche posted to text_categorization text-mining by svozil to the group Bioinformatics on 2009-12-20 06:14:38 as along with 2 people briordan wryun
	PuReD-MCL: a graph-based PubMed document clustering methodology [My Copy] Bioinformatics, Vol. 24, No. 17. (1 September 2008), pp. 1935-1941. by T. Theodosiou, N. Darzentas, L. Angelis, C. A. Ouzounis posted to bioinformatics document_clustering graph mcl pubmed text-mining by svozil to the group Bioinformatics on 2009-07-19 19:19:57 as along with 9 people bsamal calderonv coela guhjy druvus Gaetan mitko rabio dullhunk
	Beyond TFIDF weighting for text categorization in the vector space model [My Copy] In In Proceedings of the Proceedings of the 19th International Joint Conference on Artificial Intelligence (IJCAI 2005 (2005), pp. 1130-1135. by Pascal Soucy posted to text-mining by svozil to the group Bioinformatics on 2009-06-11 11:51:09 as
	A vector space model for automatic indexing [My Copy] Commun. ACM, Vol. 18, No. 11. (November 1975), pp. 613-620. by G. Salton, A. Wong, C. S. Yang posted to text-mining by svozil to the group Bioinformatics on 2009-06-11 11:42:37 as along with 37 people and 3 groups lariverosc fer eabait minshady meikipp gavinhoran fordparsons pcchang85 gerold baaic fisherp gilsonline ssn pdlug ville jcampos k12u yas mthomure ianturton taho naufraghi frohike noa codex chirayu_kong ransombriggs tomrowlands Nien diogomartins markymaypo thesis2007 Wurlitzer Tronhus mediallo takeha-e jaychoo T_lab Adaptive-Web ARTFL
	Recognizing names in biomedical texts: a machine learning approach. [My Copy] Bioinformatics (Oxford, England), Vol. 20, No. 7. (1 May 2004), pp. 1178-1190. by GuoDong Zhou, Jie Zhang, Jian Su, Dan Shen, ChewLim Tan posted to bioinformatics biomedical ner powerbione text-mining by svozil to the group Bioinformatics on 2009-05-26 16:36:31 as along with 4 people and 2 groups henk-cul arafalov irenas farzanehs dbmi-nlp dbk-lab
	An analysis of statistical term strength and its use in the indexing and retrieval of molecular biology texts. [My Copy] Computers in biology and medicine, Vol. 26, No. 3. (May 1996), pp. 209-222. by W. J. Wilbur, Y. Yang posted to biomedical text-mining by svozil to the group Bioinformatics on 2009-05-25 15:15:57 as
	EDGAR: extraction of drugs, genes and relations from the biomedical literature. [My Copy] Pac Symp Biocomput (2000), pp. 517-528. by T. C. Rindflesch, L. Tanabe, J. N. Weinstein, L. Hunter posted to bioinformatics edgar ner text-mining by svozil to the group Bioinformatics on 2009-05-24 20:51:19 as along with 3 people and 1 group irenas zlu ibuch dbk-lab
	Knowledge discovery in biology and biotechnology texts: a review of techniques, evaluation strategies, and applications. [My Copy] Critical reviews in biotechnology, Vol. 25, No. 1-2. (n 2005), pp. 31-52. by J. Natarajan, D. Berrar, C. J. Hack, W. Dubitzky posted to information_retrieval nlp review text-mining by svozil to the group Bioinformatics on 2009-04-22 07:44:06 as along with 2 people mitko lmichan
	The use of domain-specific concepts in biomedical text summarization [My Copy] Information Processing & Management, Vol. 43, No. 6. (November 2007), pp. 1765-1776. by L. Reeve, H. Han, A. Brooks posted to automatic summarization text-mining by svozil to the group Bioinformatics on 2009-04-21 10:43:37 as
	Evaluation of text data mining for database curation: lessons learned from the KDD Challenge Cup. [My Copy] Bioinformatics, Vol. 19 Suppl 1 (2003) by A. S. Yeh, L. Hirschman, A. A. Morgan posted to curation evaluation flybase kdd text-mining by svozil to the group Bioinformatics on 2009-04-13 17:38:52 as along with 4 people and 2 groups irenas yas natsu blackbart dbk-lab T_lab
	BioRAT: extracting biological information from full-length papers [My Copy] Bioinformatics, Vol. 20, No. 17. (22 November 2004), pp. 3206-3213. by David P. A. Corney, Bernard F. Buxton, William B. Langdon, David T. Jones posted to biorat full-text text-mining by svozil to the group Bioinformatics on 2009-04-13 14:37:28 as along with 14 people and 6 groups bsamal robert85 cisevol arafalov camster snuppepuppan irenas Enro guhjy A_Olympia helliontroy massivemayhem sobolevnrm satre BergmanLab Philosophy_of_Information dbk-lab Blog_and_Wiki_Research biomedical-nlp baker-group
	Extraction of biological interaction networks from scientific literature. [My Copy] Brief Bioinform, Vol. 6, No. 3. (September 2005), pp. 263-276. by A. Skusa, A. Rüegg, J. Köhler posted to text-mining system_biology network interaction extraction by svozil to the group Bioinformatics on 2009-04-10 21:32:38 as along with 2 people and 1 group yas natsu T_lab
	Using machine learning to extract drug and gene relationships from text [My Copy] (2004) by Jeffrey T. Chang posted to 0 biomedical drug gene relationship text-mining thesis by svozil to the group Bioinformatics on 2009-04-08 10:05:13 as
	Evaluation of biomedical text-mining systems: lessons learned from information retrieval. [My Copy] Briefings in bioinformatics, Vol. 6, No. 4. (December 2005), pp. 344-356. by William Hersh posted to biomedical evaluation information_retrieval text-mining by svozil to the group Bioinformatics on 2009-04-08 09:59:13 as along with 6 people artaban421 daforerog lmichan henk-cul aheilbut hpiwowar
	What makes a gene name? Named entity recognition in the biomedical literature. [My Copy] Brief Bioinform, Vol. 6, No. 4. (December 2005), pp. 357-369. by U. Leser, J. Hakenberg posted to ambiquity gene ner review text-mining by svozil to the group Bioinformatics on 2009-04-08 09:56:51 as along with 4 people and 1 group eesruiz Sjitprasutwit irenas miguel ImagCom - Biomedical Text Computing
	Gene name ambiguity of eukaryotic nomenclatures. [My Copy] Bioinformatics, Vol. 21, No. 2. (15 January 2005), pp. 248-256. by L. Chen, H. Liu, C. Friedman posted to ambiquity gene ner nlp text-mining by svozil to the group Bioinformatics on 2009-04-08 09:54:45 as along with 4 people and 3 groups cisevol snuppepuppan irenas yas BergmanLab dbk-lab T_lab
	Term identification in the biomedical literature. [My Copy] J Biomed Inform, Vol. 37, No. 6. (December 2004), pp. 512-526. by M. Krauthammer, G. Nenadic posted to biomedical ner review text-mining by svozil to the group Bioinformatics on 2009-04-08 08:04:12 as along with 9 people and 4 groups artaban421 cisevol irenas kslibrarian bourne yas bhaddow kkaiser akastrin BergmanLab dbk-lab T_lab IEG
	Text mining and ontologies in biomedicine: Making sense of raw text [My Copy] Brief Bioinform, Vol. 6, No. 3. (1 January 2005), pp. 239-251. by Irena Spasic, Sophia Ananiadou, John McNaught, Anand Kumar posted to biomedical ontology text-mining by svozil to the group Bioinformatics on 2009-04-07 20:46:06 as along with 18 people and 4 groups babaluma lmichan tsunol artaban421 daforerog liblab arafalov henk-cul farzanehs lauras irenas andytseng yas hpiwowar helliontroy johnkork daniel_schober yggdrasil NLP dbk-lab T_lab biomedical-nlp
	Five Steps to Text Mining in Biomedical Literature [My Copy] In Second European Workshop on Data Mining and Text Mining in Bioinformatics (2004) by Brigitte mathiak, Silke eckstein posted to biomedical text-mining by svozil to the group Bioinformatics on 2009-04-07 20:42:44 as
	GENOMICS AND NATURAL LANGUAGE PROCESSING [My Copy] Nat Rev Genet, Vol. 3, No. 8. (2002), pp. 601-610. by Mark D. Yandell, William H. Majoros posted to biomedical genomics nlp review text-mining by svozil to the group Bioinformatics on 2009-04-06 10:42:53 as along with 5 people and 1 group bayesian yas jpestian dejori TheresaNiederberger T_lab
	Getting to the (c)ore of knowledge: mining biomedical literature. [My Copy] Int J Med Inform, Vol. 67, No. 1-3. (4 December 2002), pp. 7-18. by B. de Bruijn, J. Martin posted to biomedical review text-mining by svozil to the group Bioinformatics on 2009-04-06 10:41:05 as along with 5 people and 2 groups artaban421 irenas Enro yas hpiwowar dbk-lab T_lab
	Extraction of semantic biomedical relations from text using conditional random fields [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (2008), 207. by Markus Bundschus, Mathaeus Dejori, Martin Stetter, Volker Tresp, Hans P. Kriegel posted to biomedical crf diseases gene generif relationship text-mining treatment by svozil to the group Bioinformatics on 2009-04-05 09:08:36 as along with 9 people and 1 group artaban421 Scis0000002 Effie ogenex yas guhjy bundschu naegele TheresaNiederberger NaCTeM
	Biological entity recognition with conditional random fields. [My Copy] AMIA ... Annual Symposium proceedings / AMIA Symposium. AMIA Symposium (2008), pp. 293-297. by Y. He, M. Kayaalp posted to abgene bioinformatics biomedical crf metamap ner semrep text-mining umls by svozil to the group Bioinformatics on 2009-04-05 09:01:09 as
	SYMBIOmatics: synergies in Medical Informatics and Bioinformatics--exploring current scientific literature for emerging topics. [My Copy] BMC Bioinformatics, Vol. 8 Suppl 1 (2007) by D. Rebholz-Schuhman, G. Cameron, D. Clark, et al.E. van Mulligen, J. L. Coatrieux, E. Del Hoyo Barbolla, F. Martin-Sanchez, L. Milanesi, I. Porro, F. Beltrame, I. Tollis, J. Van der Lei posted to bioinformatics medical_informatics symbiomatics synergy text-mining by svozil to the group Bioinformatics on 2009-04-04 21:31:55 as along with 3 people guhjy hpiwowar waghsk
	Status of text-mining techniques applied to biomedical text [My Copy] Drug Discovery Today, Vol. 11, No. 7-8. (April 2006), pp. 315-325. by R. Erhardt, R. Schneider, C. Blaschke posted to bioinformatics review text-mining by svozil to the group Bioinformatics on 2009-04-04 06:20:07 as along with 18 people and 1 group holopoj mitko fisherp liblab Zephyrus ogenex lesikv henk-cul bqchinh Enro guhjy hpiwowar ibuch mroos TheresaNiederberger akastrin aliekens irenas AID
	A survey of current work in biomedical text mining [My Copy] Brief Bioinform, Vol. 6, No. 1. (1 January 2005), pp. 57-71. by Aaron M. Cohen, William R. Hersh posted to bioinformatics classification extraction ner relationship review synonym text-mining by svozil to the group Bioinformatics on 2009-04-04 06:19:09 as along with 31 people and 8 groups babaluma artaban421 lmichan daforerog guelke eesruiz blogbrain fitzgeraldp2 henk-cul lauras mitko vkwn cisevol irenas carlblesius route145 yas natsu t11 hpiwowar fisherp biblio24 bhaddow johnkork c061978 kkaiser benfqt farzanehs satre lillejul TheresaNiederberger BergmanLab dbk-lab Blog_and_Wiki_Research mgh-lcs hst-bmi T_lab Evidence-based-medicine IEG
	Frontiers of biomedical text mining: current progress [My Copy] Brief Bioinform In Brief Bioinform, Vol. 8, No. 5. (1 September 2007), pp. 358-375. by Pierre Zweigenbaum, Dina Demner-Fushman, Hong Yu, Kevin B. Cohen posted to bioinformatics ner review text-mining by svozil to the group Bioinformatics on 2009-04-04 06:15:49 as along with 21 people and 2 groups babaluma artaban421 Effie eitanla1 junehlee Keywan arafalov henk-cul Waderoad vkwn farzanehs bqchinh cisevol guhjy yas dullhunk hpiwowar wchapman yggdrasil TheresaNiederberger irenas BergmanLab dbmi-nlp
	Extracting interactions between proteins from the literature [My Copy] Journal of Biomedical Informatics, Vol. 41, No. 2. (15 April 2008), pp. 393-407. by Deyu Zhou, Yulan He posted to bioinformatics ppi review text-mining by svozil to the group Bioinformatics on 2009-04-04 06:11:04 as along with 5 people robert85 liblab satre gmonce guhjy
	Accomplishments and challenges in literature data mining for biology. [My Copy] Bioinformatics (Oxford, England), Vol. 18, No. 12. (December 2002), pp. 1553-1561. by Lynette Hirschman, Jong C. Park, Junichi Tsujii, Limsoon Wong, Cathy H. Wu posted to bib bio bioinformatics literature-mining msc nlp onto pubmed-mining review text-mining txtmining by kehan to the group Bioinformatics on 2006-03-23 15:46:21 as along with 8 people and 5 groups frohike irenas Enro yas benny caporaso vlachmore satre dbk-lab biodiversity_conservation T_lab biomedical-nlp GrassBase

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Group: Bioinformatics - with tag text-mining [43 articles] Export Sort

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