Group: WetBiology - with tag transcription [37 articles] Export

Recent papers posted by members of the WetBiology group with tag transcription

	Origin of phenotypes: genes and transcripts. [My Copy] Genome research, Vol. 17, No. 6. (June 2007), pp. 682-690. by T. R. Gingeras posted to transcription transcript phenotype mrna micro-rna genotype genome-wide genome gene definition by xico to the group WetBiology on 2007-08-28 22:06:17 as along with 10 people and 3 groups inesdesantiago klo guhjy balicea dchughes michC ghattem Garamonfok Jporci bertelsen Bioinformatics G4ID Genetics-of-Gambling
	Dark matter in the genome: evidence of widespread transcription detected by microarray tiling experiments. [My Copy] Trends Genet, Vol. 21, No. 2. (February 2005), pp. 93-102. by J. M. Johnson, S. Edwards, D. Shoemaker, E. E. Schadt posted to transcriptome transcription tiling review region micro-array matter junk intergenic hybridization genome dna dark antisense by xico to the group WetBiology on 2007-07-06 19:10:13 as along with 8 people and 1 group inesdesantiago greg briann cassj eoghanharr imouthesmp adepace talponer EisenLab
	Genome-wide transcription and the implications for genomic organization [My Copy] Nature Reviews Genetics, Vol. 8, No. 6. (08 May 2007), pp. 413-423. by Philipp Kapranov, Aarron T. Willingham, Thomas R. Gingeras posted to transcriptome transcription organization genomics genome-wide genome gene by xico to the group WetBiology on 2007-07-05 15:10:55 as along with 23 people and 4 groups Jporci bartjacobse bertelsen daforerog coela hagechouchin443 emptyhb pengchy guhjy balicea dchughes kengg sebastien_vigneau zwang ajgentles Ema asddd hanansh antonkratz vietanh0 maximilianh GeeSharpMinor inesdesantiago Bioinformatics G4ID Plantandetc Genetics-of-Gambling
	Gene-specific recruitment of positive and negative elongation factors during stimulated transcription of the MKP-1 gene in neuroendocrine cells. [My Copy] Nucleic Acids Res, Vol. 35, No. 3. (2007), pp. 1007-1017. by T. Fujita, S. Ryser, S. Tortola, I. Piuz, W. Schlegel posted to transcription recruitment ptefb positive nelf negative mkp-1 gene-specific factor elongation dsif cyct cdk9 by xico to the group WetBiology on 2007-06-06 17:00:52 as
	A real-time view of the TAR:Tat:pTEFb complex at HIV-1 transcription sites [My Copy] Retrovirology, Vol. 4 (30 May 2007), 36. by Dorothee Molle, Paolo Maiuri, Stephanie Boireau, et al.Edouard Bertrand, Anna Knezevich, Alessandro Marcello, Eugenia Basyuk posted to transcription tat tar t retrovirus real-time ptefb hiv-1 elongation cyct cyclin cdk9 aids by xico to the group WetBiology on 2007-06-06 16:34:47 as
	Exploring functional relationships between components of the gene expression machinery. [My Copy] Nat Struct Mol Biol, Vol. 12, No. 2. (February 2005), pp. 175-182. by T. Burckin, R. Nagel, Y. Mandel-Gutfreund, et al.L. Shiue, T. A. Clark, J. L. Chong, T. H. Chang, S. Squazzo, G. Hartzog, M. Ares posted to transcription splicing review mrna maturation machinery gene expression elongation by xico to the group WetBiology on 2007-06-06 16:28:43 as along with 2 people balajis opheliav
	Cyclin Box Structure of the P-TEFb Subunit Cyclin T1 Derived from a Fusion Complex with EIAV Tat. [My Copy] J Mol Biol (10 May 2007) by Kanchan Anand, Antje Schulte, Koh Fujinaga, Klaus Scheffzek, Matthias Geyer posted to transcription tat structure p-tefb hiv factor elongation e1av cyclint1 cyclin cdk9 box aids by xico to the group WetBiology on 2007-06-04 20:39:58 as
	Transcription regulation and animal diversity [My Copy] Nature, Vol. 424, No. 6945. (10 July 2003), pp. 147-151. by Michael Levine, Robert Tjian posted to transcription rnapolii rna regulation promoter polymerase gene factor enhancer diversity animal by xico to the group WetBiology on 2007-05-27 01:35:17 as along with 10 people and 2 groups maximilianh provero dlobo Lauren_Jones nickluscombe djkt lusk Jporci heliopais brant GEB EBI-regulation
	Genetic reconstruction of a functional transcriptional regulatory network. [My Copy] Nat Genet (8 April 2007) by Zhanzhi Hu, Patrick J J. Killion, Vishwanath R R. Iyer posted to yeast transcription regulation network genetic factor epistasis by xico to the group WetBiology on 2007-05-19 00:58:44 as along with 15 people and 5 groups sergiun TheresaNiederberger akraemer behindtherabbit ptrobajo dpollard nickluscombe zwang lizabeth dejori xingxu naegele czeller mapplab siebert Bioinformatics EisenLab EBI-regulation ic4 generif_paper
	Single-molecule analysis of RNA polymerase transcription. [My Copy] Annu Rev Biophys Biomol Struct, Vol. 35 (2006), pp. 343-360. by L. Bai, T. J. Santangelo, M. D. Wang posted to transcription tec single-molecule rna review polymerase pic analysis by xico to the group WetBiology on 2007-05-18 01:23:56 as along with 1 person toerst
	Controlling the elongation phase of transcription with P-TEFb. [My Copy] Mol Cell, Vol. 23, No. 3. (4 August 2006), pp. 297-305. by B. M. Peterlin, D. H. Price posted to dsif elongation factor nelf p-tefb phase review rnapii-ctd transcription by xico to the group WetBiology on 2007-03-13 21:42:06 as
	Pharmacological inhibitors of cyclin-dependent kinases. [My Copy] Trends Pharmacol Sci, Vol. 23, No. 9. (September 2002), pp. 417-425. by M. Knockaert, P. Greengard, L. Meijer posted to cdk cell cycle cyclin inhibitor kinase pharmacology small transcription by xico to the group WetBiology on 2007-02-13 01:44:23 as
	Mediator and the mechanism of transcriptional activation. [My Copy] Trends Biochem Sci, Vol. 30, No. 5. (May 2005), pp. 235-239. by R. D. Kornberg posted to transcription review repressor mediator kornberg enhancer activator activation by xico to the group WetBiology on 2007-01-14 20:39:46 as along with 3 people emptyhb gloria hplatero
	The glucocorticoid receptor blocks P-TEFb recruitment by NFkappaB to effect promoter-specific transcriptional repression. [My Copy] Genes Dev, Vol. 19, No. 9. (1 May 2005), pp. 1116-1127. by H. F. Luecke, K. R. Yamamoto posted to cdk9 ctd-kinase cyct elongation glucocorticoid nfkappab p-tefb receptor repression transcription by xico to the group WetBiology on 2006-06-09 19:49:42 as
	Coordination of transcription, RNA processing, and surveillance by P-TEFb kinase on heat shock genes. [My Copy] Mol Cell, Vol. 13, No. 1. (16 January 2004), pp. 55-65. by Z. Ni, B. E. Schwartz, J. Werner, J. R. Suarez, J. T. Lis posted to cdk9 gene heat p-tef processing rna shock surveillance transcription by xico to the group WetBiology on 2006-04-04 19:06:16 as
	Gene-specific requirement for P-TEFb activity and RNA polymerase II phosphorylation within the p53 transcriptional program. [My Copy] Genes Dev, Vol. 20, No. 5. (1 March 2006), pp. 601-612. by N. P. Gomes, G. Bjerke, B. Llorente, S. A. Szostek, B. M. Emerson, J. M. Espinosa posted to gene-specific p-tefb p53 phosphorylation rnapii transcription by xico to the group WetBiology on 2006-04-04 19:02:52 as
	Role of the C-terminal domain of RNA polymerase II in U2 snRNA transcription and 3' processing. [My Copy] Mol Cell Biol, Vol. 24, No. 2. (January 2004), pp. 846-855. by E. Y. Jacobs, I. Ogiwara, A. M. Weiner posted to ctd processing rnapii snrna transcription u by xico to the group WetBiology on 2006-04-04 18:38:44 as
	Little lambda, who made thee? [My Copy] Microbiol Mol Biol Rev, Vol. 68, No. 4. (December 2004), pp. 796-813. by M. E. Gottesman, R. A. Weisberg posted to initiation lamda phage prokariote repressor review transcription by xico to the group WetBiology on 2006-04-04 17:52:26 as along with 1 person gloria
	Gene regulatory networks and the evolution of animal body plans. [My Copy] Science, Vol. 311, No. 5762. (10 February 2006), pp. 796-800. by E. H. Davidson, D. H. Erwin posted to animal body gene network plan regulation review transcription by xico to the group WetBiology on 2006-04-04 17:47:35 as along with 20 people and 4 groups mjoach dlobo anphony qwermish sWorgan Lauren_Jones eldan bayesian dpollard dchughes brixtonmc Liusha margaritis josepe cjeans sujaikumar Garamonfok jtomasch Ema natstreet GEB EisenLab G4ID Genetics-of-Gambling
	Mutual targeting of mediator and the TFIIH kinase Kin28. [My Copy] J Biol Chem, Vol. 279, No. 28. (9 July 2004), pp. 29114-29120. by B. W. Guidi, G. Bjornsdottir, D. C. Hopkins, et al.L. Lacomis, H. Erdjument-Bromage, P. Tempst, L. C. Myers posted to cdk7 ctd ctd-kinase initiation kin28 mediator polymerase rna rnapii tfiih transcription by xico to the group WetBiology on 2006-04-04 17:43:45 as
	Secrets of a double agent: CDK7 in cell-cycle control and transcription. [My Copy] J Cell Sci, Vol. 118, No. Pt 22. (15 November 2005), pp. 5171-5180. by R. P. Fisher posted to agent cdk7 cell-cycle control double dual review role transcription by xico to the group WetBiology on 2006-03-07 01:01:57 as along with 1 person gloria
	PPARgamma Recruits the P-TEFb Complex to Activate Transcription and Promote Adipogenesis. [My Copy] Mol Endocrinol (16 February 2006) by Irena Iankova, Rasmus K K. Petersen, Jean-Sébastien S. Annicotte, et al.Carine Chavey, Jacob B B. Hansen, Irina Kratchmarova, David Sarruf, Monsef Benkirane, Karsten Kristiansen, Lluis Fajas posted to adipogenesis cdk9 cyclint drb elongation nuclear p-tefb ppar receptor transcription by xico to the group WetBiology on 2006-03-06 23:34:15 as
	Regulation of RNA Polymerase II Transcription by Sequence-Specific DNA Binding Factors [My Copy] Cell, Vol. 116, No. 2. (23 January 2004), pp. 247-257. by J. T. Kadonaga posted to dna-binding factor review rnapolii sequence-specific transcription by xico to the group WetBiology on 2006-03-02 02:31:32 as
	The E2F family: specific functions and overlapping interests [My Copy] The EMBO Journal, Vol. aop, No. current. (02 December 2004) by Claire Attwooll, Eros L. Denchi, Kristian Helin posted to e2f factor family functions review transcription by xico to the group WetBiology on 2006-03-02 02:27:48 as along with 1 person gloria
	The spanish connection: transcription and mRNA processing get even closer. [My Copy] Cell, Vol. 120, No. 2. (28 January 2005), pp. 163-166. by M. Ares, N. J. Proudfoot posted to cap connection coupling mrna polya processing splicing transcription by xico to the group WetBiology on 2006-02-18 19:53:11 as
	Comparative genomics of cyclin-dependent kinases suggest co-evolution of the RNAP II C-terminal domain and CTD-directed CDKs. [My Copy] BMC Genomics, Vol. 5, No. 1. (20 September 2004) by Z. Guo, J. W. Stiller posted to cdc2l5 cdk cdk7 cdk8 cdk9 comparative crkrs ctd ctd-cdk genomics rnapii transcription by xico to the group WetBiology on 2006-02-17 15:57:10 as
	Interactions between fission yeast Cdk9, its cyclin partner Pch1, and mRNA capping enzyme Pct1 suggest an elongation checkpoint for mRNA quality control. [My Copy] J Biol Chem, Vol. 278, No. 9. (28 February 2003), pp. 7180-7188. by Y. Pei, B. Schwer, S. Shuman posted to cdk9 checkpoint control cyclin elongation fission mrna pch1 pct1 quality spcdk9 transcription yeast by xico to the group WetBiology on 2006-02-05 00:33:39 as along with 1 person gloria
	Analysis of polymerase II elongation complexes by native gel electrophoresis. Evidence for a novel carboxyl-terminal domain-mediated termination mechanism. [My Copy] J Biol Chem, Vol. 279, No. 22. (28 May 2004), pp. 23223-23228. by Z. Zhang, C. H. Wu, D. S. Gilmour posted to complex ctd elongation polii termination transcription by xico to the group WetBiology on 2006-01-28 00:54:36 as
	Smad transcription factors. [My Copy] Genes Dev, Vol. 19, No. 23. (1 December 2005), pp. 2783-2810. by J. Massagué, J. Seoane, D. Wotton posted to cancer factor review smad transcription by xico to the group WetBiology on 2006-01-28 00:22:32 as along with 3 people gloria hervelequere heliopais
	Dynamic combinatorial networks in nuclear receptor-mediated transcription. [My Copy] J Biol Chem, Vol. 280, No. 38. (23 September 2005), pp. 32565-32568. by C. Rochette-Egly posted to combinatorial network networks nuclear receptor review signal transcription transduction by xico to the group WetBiology on 2006-01-13 20:15:26 as along with 1 person and 1 group gloria Bioinformatics
	The multicoloured world of promoter recognition complexes. [My Copy] EMBO J, Vol. 23, No. 1. (14 January 2004), pp. 2-8. by F. Müller, L. Tora posted to complex polymerase promoter recognition rna transcription by xico to the group WetBiology on 2006-01-09 15:33:51 as along with 2 people and 1 group cisevol myrtilus BergmanLab
	Constructing transcriptional regulatory networks [My Copy] Genes & Development, Vol. 19, No. 13. (1 July 2005), pp. 1499-1511. by Alexandre Blais, Brian D. Dynlacht posted to network regulation review transcription by xico to the group WetBiology on 2006-01-03 19:23:43 as along with 9 people and 2 groups sergiun fenghezi vertikalist brant balicea tabu braingrind lusk jtomasch BTS-PT-AS-CS EisenLab
	The Proteasome Regulatory Particle Alters the SAGA Coactivator to Enhance Its Interactions with Transcriptional Activators [My Copy] Cell, Vol. 123, No. 3. (4 November 2005), pp. 423-436. by Daeyoup Lee, Elena Ezhkova, Bing Li, Samantha G. Pattenden, William P. Tansey, Jerry L. Workman posted to acetyltransferase activator coactivator degradation histone proteasome protein saga transcription by xico to the group WetBiology on 2005-12-27 19:33:49 as along with 1 person zhlei
	Complete RNA polymerase II elongation complex structure and its interactions with NTP and TFIIS. [My Copy] Mol Cell, Vol. 16, No. 6. (22 December 2004), pp. 955-965. by H. Kettenberger, K. J. Armache, P. Cramer posted to complex elongation polymerase rna sructure tfiis transcription by xico to the group WetBiology on 2005-12-26 22:34:31 as
	CONTROLLING NUCLEAR RECEPTORS: THE CIRCULAR LOGIC OF COFACTOR CYCLES [My Copy] Nat Rev Mol Cell Biol, Vol. 6, No. 7. (July 2005), pp. 542-554. by Valentina Perissi, Michael G. Rosenfeld posted to eucaryotic nuclear receptor review transcription by xico to the group WetBiology on 2005-12-23 11:49:36 as along with 1 person gloria
	REPLICATION AND TRANSCRIPTION: SHAPING THE LANDSCAPE OF THE GENOME [My Copy] Nat Rev Genet, Vol. 6, No. 9. (2005), pp. 669-677. by Lyubomira Chakalova, Emmanuel Debrand, Jennifer A. Mitchell, Cameron S. Osborne, Peter Fraser posted to replication review transcription by xico to the group WetBiology on 2005-12-23 11:45:50 as along with 6 people and 2 groups daveGerrard polivares bala gloria margaritis xingxu BergmanLab DictyosteliumGroup
	Signalling In The Epidermis: The E2f Cell Cycle Regulatory Pathway In Epidermal Morphogenesis, Regeneration And Transformation. [My Copy] Int J Biol Sci, Vol. 1, No. 2. (2005), pp. 87-95. by Iordanka A A. Ivanova, Sudhir J A J. D'Souza, Lina Dagnino posted to cdk cell cycle development e2f morphogenesis transcription by xico to the group WetBiology on 2005-12-22 16:53:39 as

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regulation	433
factor	235
review	196
network	167
yeast	166
chromatin	162
evolution	152
promoter	141
expression	133
drosophila	125
binding	109
rna	107
gene	106
for-the-review	95
biodegradation	90
elegans	83
nematode	80
celegans	79
c_elegans	78
caenorhabditis_elegans	78
wormbase	78
genomics	77
article	74
genome	73
polymerase	65
dna	63
motif	56
microarray	55
regulatory	55
epigenetics	52
cancer	51
microrna	51
networks	51
translation	49
bacteria	48
bioinformatics	48
human	48
elongation	47
histone	46
protein	46
transcriptome	46
prediction	45
factors	43
mrna	43
cloned_genes	42
gene_regulation	42
transcriptional-regulation	42
gene_expression	40
antisense	39
development	39
integration	37
initiation	35
methylation	35
nucleosome	34
genetics	33
site	33
gene-expression	32
noise	32
tfbs	31
conserved	30
model	30
trna	30
mouse	29
mirna	28
rnap	27
dna_sequence	26
activator	25
biology	25
chromosomes	25
splicing	25
transcription_regulation	25
activation	24
cell	24
analysis	23
mediator	23
ncrna	23
sequencing	23
transcription_factor	23
cisreg	22
sequence	22
tf	22
imprinting	21
replication	21
breast	20
differentiation	20
genome-wide	20
mammals	20
receptor	20
remodeling	20
chip-chip	19
genetic	19
heat_shock	19
hematopoiesis	19
mathematical_model	19
metabolism	19
repression	19
structure	19
combinatorial	18
nucleus	18
termination	18

Group: WetBiology - with tag transcription [37 articles] Export

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