Group: SIMR bioinformatics - library 70 articles Export

	Viral population estimation using pyrosequencing. [My Copy] PLoS computational biology, Vol. 4, No. 4. (9 April 2008), e1000074. by Nicholas Eriksson, Lior Pachter, Yumi Mitsuya, et al.Soo-Yon Y. Rhee, Chunlin Wang, Baback Gharizadeh, Mostafa Ronaghi, Robert W. Shafer, Niko Beerenwinkel posted to no-tag by ghattem to the group SIMR bioinformatics on 2009-10-09 22:56:27 as along with 6 people and 1 group nfparrish jonilaserson hpaces jmeppley bmaust djkt iSEEM
	A Hierarchy of H3K4me3 and H3K27me3 Acquisition in Spatial Gene Regulation in Xenopus Embryos [My Copy] Developmental Cell, Vol. 17, No. 3. (15 September 2009), pp. 425-434. by Robert C. Akkers, Simon J. van Heeringen, Ulrike G. Jacobi, et al.Eva M. Janssen-Megens, Kees-Jan Françoijs, Hendrik G. Stunnenberg, Gert J. Veenstra posted to rna-seq chip-seq by ghattem to the group SIMR bioinformatics on 2009-09-21 20:09:04 as along with 2 people fenghezi inesdesantiago
	Identifiability of isoform deconvolution from junction arrays and RNA-Seq [My Copy] Bioinformatics, Vol. 25, No. 23. (1 December 2009), pp. 3056-3059. by David Hiller, Hui Jiang, Weihong Xu, Wing H. Wong posted to rna-seq alternative_splicing by ghattem to the group SIMR bioinformatics on 2009-09-21 20:02:31 as along with 5 people and 1 group jwfoley djkt hzoltan cajunsushi GeeSharpMinor Journal picks
	Mapping short DNA sequencing reads and calling variants using mapping quality scores. [My Copy] Genome research, Vol. 18, No. 11. (19 November 2008), pp. 1851-1858. by Heng Li, Jue Ruan, Richard Durbin posted to alignment_tool nextgen_sequencing by ghattem to the group SIMR bioinformatics on 2009-08-05 16:49:50 as along with 38 people and 1 group seninp heliopais hzoltan cthachuk darshan adijr darian bozdagd jmanning2k stubrown APRegier jbhiatt mmartin michaelbarton polivares jonilaserson humburg n00c jessopher maren GeeSharpMinor vmsr vplagnol natstreet poschm jfr druvus dandaman xingxu rschulz jmcq inesdesantiago Neeperando nmohelli matthewsuderman bpb gdb farhat BergmanLab
	Efficient large-scale sequence comparison by locality-sensitive hashing. [My Copy] Bioinformatics (Oxford, England), Vol. 17, No. 5. (1 May 2001), pp. 419-428. by J. Buhler posted to alignment_tool nextgen_sequencing by ghattem to the group SIMR bioinformatics on 2009-08-05 16:47:29 as along with 2 people nedwards RamuAnandakrishnan
	A Strand-Specific RNA–Seq Analysis of the Transcriptome of the Typhoid Bacillus <italic>Salmonella</italic> Typhi [My Copy] PLoS Genet, Vol. 5, No. 7. (17 July 2009), e1000569. by Timothy T. Perkins, Robert A. Kingsley, Maria C. Fookes, et al.Paul P. Gardner, Keith D. James, Lu Yu, Samuel A. Assefa, Miao He, Nicholas J. Croucher, Derek J. Pickard, Duncan J. Maskell, Julian Parkhill, Jyoti Choudhary, Nicholas R. Thomson, Gordon Dougan posted to nextgen_sequencing rna-seq by ghattem to the group SIMR bioinformatics on 2009-07-24 15:56:45 as along with 5 people and 1 group hzoltan stubrown fenghezi GeeSharpMinor ppgardne Journal picks
	Transcriptome analysis by strand-specific sequencing of complementary DNA [My Copy] Nucl. Acids Res., Vol. 37, No. 18. (1 October 2009), e123. by Dmitri Parkhomchuk, Tatiana Borodina, Vyacheslav Amstislavskiy, et al.Maria Banaru, Linda Hallen, Sylvia Krobitsch, Hans Lehrach, Alexey Soldatov posted to nextgen_sequencing rna-seq by ghattem to the group SIMR bioinformatics on 2009-07-24 15:54:21 as along with 5 people and 1 group hzoltan inesdesantiago dswan stajich guhjy Mycology
	Motif composition, conservation and condition-specificity of single and alternative transcription start sites in the Drosophila genome [My Copy] Genome Biology, Vol. 10, No. 7. (2009), R73. by Elizabeth Rach, Hsiang Y. Yuan, William Majoros, Pavel Tomancak, Uwe Ohler posted to no-tag by acn to the group SIMR bioinformatics on 2009-07-15 18:27:50 as along with 5 people and 1 group operon ppgardne maren leemond31 dandaman Journal picks
	A general framework for multiple testing dependence [My Copy] Proceedings of the National Academy of Sciences (24 November 2008) by Jeffrey T. Leek, John D. Storey posted to microarray multiple_testing by ghattem to the group SIMR bioinformatics on 2009-07-09 23:54:03 as along with 10 people TRHvidsten guhjy briordan dbk stringertheory jiqiu fpattyn barriot tmmurali jjray
	Extracting transcription factor targets from ChIP-Seq data [My Copy] Nucl. Acids Res., Vol. 37, No. 17. (1 September 2009), e113. by Geetu Tuteja, Peter White, Jonathan Schug, Klaus H. Kaestner posted to no-tag by malcook to the group SIMR bioinformatics on 2009-06-26 22:23:09 as along with 14 people and 3 groups hzoltan Vincent_Rouilly mfgreen ewilban1 idonaldson guhjy mkiyer rschulz fenghezi clearbluespring thegoose robeirne inesdesantiago polivares Chinnaiyan Lab BergmanLab Journal picks
	Swift: primary data analysis for the Illumina Solexa sequencing platform [My Copy] Bioinformatics, Vol. 25, No. 17. (1 September 2009), pp. 2194-2199. by Nava Whiteford, Tom Skelly, Christina Curtis, et al.Matt E. Ritchie, Andrea Lohr, Alexander W. Zaranek, Irina Abnizova, Clive Brown posted to nextgen_sequencing by ghattem to the group SIMR bioinformatics on 2009-06-26 19:08:34 as along with 21 people and 3 groups heliopais hzoltan dakelley sotacam lh49 djkt rtogawa cassj dswan torfinnnome rschulz natstreet druvus jasontsai jmeppley nuin polivares n00c aprasad niallhaslam idoerg Bioinformatics BergmanLab Journal picks
	RNA-seq: an assessment of technical reproducibility and comparison with gene expression arrays. [My Copy] Genome research, Vol. 18, No. 9. (11 September 2008), pp. 1509-1517. by John C. Marioni, Christopher E. Mason, Shrikant M. Mane, Matthew Stephens, Yoav Gilad posted to rna-seq by huali to the group SIMR bioinformatics on 2009-06-24 18:42:21 as along with 46 people and 1 group cthachuk hzoltan jwfoley heliopais debasis maren mtagaya mkiyer stubrown woodson8 jonilaserson burak Ayest ThomasDOtto n00c natstreet bandrewfox daed dandaman slevy03 pengchy felsani coela shikin fhalbrit inesdesantiago jmcq lp2 caseybrown jfr dakelley Ema balicea vega lusk semrich vmarshal fpattyn stajich giovanni ela503 Stew guhjy kengg shurjo GustavoLacerda Mycology
	Current-generation high-throughput sequencing: deepening insights into mammalian transcriptomes [My Copy] Genes & Development, Vol. 23, No. 12. (15 June 2009), pp. 1379-1386. by Benjamin J. Blencowe, Sidrah Ahmad, Leo J. Lee posted to rna-seq by huali to the group SIMR bioinformatics on 2009-06-24 18:39:54 as along with 5 people cthachuk heliopais woodson8 guhjy fenghezi
	VarScan: variant detection in massively parallel sequencing of individual and pooled samples [My Copy] Bioinformatics, Vol. 25, No. 17. (1 September 2009), pp. 2283-2285. by Daniel C. Koboldt, Ken Chen, Todd Wylie, et al.David E. Larson, Michael D. McLellan, Elaine R. Mardis, George M. Weinstock, Richard K. Wilson, Li Ding posted to 454 mutation nextgen by malcook to the group SIMR bioinformatics on 2009-06-23 19:40:04 as along with 15 people and 2 groups hzoltan Peiyong darian seb1 heliopais mkiyer dakelley djkt PabloMarin guhjy n00c orzenil natstreet druvus stajich Journal picks Mycology
	A clustering approach for identification of enriched domains from histone modification ChIP-Seq data [My Copy] Bioinformatics, Vol. 25, No. 15. (1 August 2009), pp. 1952-1958. by Chongzhi Zang, Dustin E. Schones, Chen Zeng, Kairong Cui, Keji Zhao, Weiqun Peng posted to chip-seq by ghattem to the group SIMR bioinformatics on 2009-06-23 19:17:01 as along with 12 people and 1 group hzoltan hagechouchin443 ashraya stubrown cassj guhjy humburg ewilban1 gdb inesdesantiago fenghezi polivares BergmanLab
	Detection of single nucleotide variations in expressed exons of the human genome using RNA-Seq [My Copy] Nucl. Acids Res., Vol. 37, No. 16. (1 September 2009), e106. by Iouri Chepelev, Gang Wei, Qingsong Tang, Keji Zhao posted to rna-seq snp by ghattem to the group SIMR bioinformatics on 2009-06-23 18:57:28 as along with 6 people hzoltan woodson8 n00c guhjy fenghezi GeeSharpMinor
	Computational epigenetics [My Copy] Bioinformatics, Vol. 24, No. 1. (1 January 2008), pp. 1-10. by Christoph Bock, Thomas Lengauer posted to chip-chip by huali to the group SIMR bioinformatics on 2009-06-17 21:23:23 as along with 17 people and 1 group operon iris42 pawelsobko suizifish mmartin sebastien_vigneau ealloza djkt frohike timflutre cjeans epigenetics cabbagezs barriot Ema Thomasah guhjy Bioinformatics
	An integrated software system for analyzing ChIP-chip and ChIP-seq data. [My Copy] Nature biotechnology, Vol. 26, No. 11. (02 November 2008), pp. 1293-1300. by Hongkai Ji, Hui Jiang, Wenxiu Ma, David S. Johnson, Richard M. Myers, Wing H. Wong posted to chip-chip chip-seq by huali to the group SIMR bioinformatics on 2009-06-17 21:10:42 as along with 24 people and 2 groups hzoltan fpattyn stubrown isimpson tonamswish ewilban1 sebastien_vigneau jfr kmdaily cassj bryankr malcook rschulz mcm behindtherabbit psique renatomilani polivares guhjy inesdesantiago pengchy kengg bais idonaldson Neuroblastoma BenosLab
	Annotating genomes with massive-scale RNA sequencing. [My Copy] Genome biology, Vol. 9, No. 12. (2008), R175. by France Denoeud, Jean-Marc M. Aury, Corinne Da Silva, et al.Benjamin Noel, Odile Rogier, Massimo Delledonne, Michele Morgante, Giorgio Valle, Patrick Wincker, Claude Scarpelli, Olivier Jaillon, François Artiguenave posted to rna-seq by ghattem to the group SIMR bioinformatics on 2009-06-15 17:52:53 as along with 20 people hzoltan cthachuk GustavoLacerda jamselem n00c jonilaserson nlapalu jmcq dandaman abizar dakelley inesdesantiago mhamada pengchy balicea fhalbrit GeeSharpMinor natstreet druvus neils
	How to map billions of short reads onto genomes [My Copy] Nature Biotechnology, Vol. 27, No. 5. (01 May 2009), pp. 455-457. by Cole Trapnell, Steven L. Salzberg posted to alignment_tool nextgen_sequencing by ghattem to the group SIMR bioinformatics on 2009-06-09 23:12:46 as along with 28 people and 4 groups cthachuk hzoltan tonamswish heliopais giovenko jfr torfinnnome daforerog jonilaserson mkiyer Annab darian polivares kiekyon n00c GeeSharpMinor guhjy nuin reyez orzenil Thaverkamp natstreet druvus fenghezi Stew inesdesantiago idonaldson neils Bioinformatics Chinnaiyan Lab BergmanLab Bioinformatics - CRUK
	An expectation-maximization algorithm for probabilistic reconstructions of full-length isoforms from splice graphs. [My Copy] Nucleic acids research, Vol. 34, No. 10. (2006), pp. 3150-3160. by Y. Xing, T. Yu, Y. N. Wu, M. Roy, J. Kim, C. Lee posted to alternative_splicing by ghattem to the group SIMR bioinformatics on 2009-06-09 19:01:59 as
	Fast and accurate short read alignment with Burrows-Wheeler transform. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 14. (15 July 2009), pp. 1754-1760. by Heng Li, Richard Durbin posted to alignment_tool nextgen_sequencing by ghattem to the group SIMR bioinformatics on 2009-06-09 18:45:26 as along with 33 people and 3 groups lianping hzoltan cthachuk maren bozdagd adijr heliopais jmanning2k GustavoLacerda stubrown jessopher guhjy katholt mkiyer jmcq idonaldson michaelbarton polivares darian orzenil cassj inesdesantiago TRHvidsten djkt operon n00c danmaclean ppgardne nuin rschulz natstreet druvus humburg BergmanLab Bioinformatics Journal picks
	The need for speed [My Copy] Genome Biology, Vol. 10, No. 3. (2009), 212. by Paul Flicek posted to alignment_tool nextgen_sequencing by ghattem to the group SIMR bioinformatics on 2009-06-09 18:39:17 as along with 3 people seb1 n00c druvus
	Ultrafast and memory-efficient alignment of short DNA sequences to the human genome [My Copy] Genome Biology, Vol. 10, No. 3. (2009), R25. by Ben Langmead, Cole Trapnell, Mihai Pop, Steven Salzberg posted to alignment_tool nextgen_sequencing by ghattem to the group SIMR bioinformatics on 2009-06-09 18:37:27 as along with 36 people and 3 groups jfr hzoltan cthachuk darshan fstrozzi adijr debasis bozdagd polivares torfinnnome n00c talponer jmcq rschulz operon humburg idonaldson mmartin skembel dquest heliopais djkt GeeSharpMinor bertelsen darian semrich dakelley idoerg vmsr hpaces admash pdexheimer mhamada fpattyn natstreet druvus BergmanLab iSEEM Notre Dame Bioinformatics
	A hierarchical Bayesian model for comparing transcriptomes at the individual transcript isoform level [My Copy] Nucl. Acids Res., Vol. 37, No. 10. (1 June 2009), e75. by Sika Zheng, Liang Chen posted to rna-seq by ghattem to the group SIMR bioinformatics on 2009-06-03 22:52:55 as along with 6 people hzoltan debasis woodson8 guhjy GeeSharpMinor neils
	TopHat: discovering splice junctions with RNA-Seq [My Copy] Bioinformatics, Vol. 25, No. 9. (1 May 2009), pp. 1105-1111. by Cole Trapnell, Lior Pachter, Steven L. Salzberg posted to rna-seq by ghattem to the group SIMR bioinformatics on 2009-06-03 22:47:46 as along with 24 people and 1 group cthachuk hzoltan jwfoley heliopais dakelley druvus GustavoLacerda stubrown polivares torfinnnome jmcq mtagaya jonilaserson gdb guhjy ThomasDOtto n00c xingxu djkt vplagnol bertelsen natstreet idoerg vmsr BergmanLab
	Statistical inferences for isoform expression in RNA-Seq [My Copy] Bioinformatics, Vol. 25, No. 8. (15 April 2009), pp. 1026-1032. by Hui Jiang, Wing H. Wong posted to rna-seq by ghattem to the group SIMR bioinformatics on 2009-06-03 22:41:01 as along with 16 people and 1 group jwfoley hzoltan heliopais stubrown GustavoLacerda woodson8 ThomasDOtto stajich guhjy djkt shikin pengchy vplagnol rschulz jmcq GeeSharpMinor Mycology
	Transcript length bias in RNA-seq data confounds systems biology. [My Copy] Biology direct, Vol. 4, No. 1. (16 April 2009), 14. by Alicia Oshlack, Matthew J. Wakefield posted to rna-seq by ghattem to the group SIMR bioinformatics on 2009-06-02 20:25:43 as along with 14 people hzoltan manduca jwfoley juokcho debasis stubrown dswan jmcq guhjy woodson8 n00c xingxu cajunsushi bandrewfox
	Mapping and quantifying mammalian transcriptomes by RNA-Seq. [My Copy] Nature methods, Vol. 5, No. 7. (30 July 2008), pp. 621-628. by Ali Mortazavi, Brian A. Williams, Kenneth McCue, Lorian Schaeffer, Barbara Wold posted to rna-seq by ghattem to the group SIMR bioinformatics on 2009-06-02 17:37:30 as along with 41 people and 1 group cthachuk hzoltan jwfoley heliopais juokcho aktas debasis bertelsen idonaldson darian stubrown dswan ewilban1 mtagaya woodson8 burak jonilaserson inesdesantiago ThomasDOtto n00c GustavoG vplagnol druvus cfvillalta vmsr poschm dandaman shikin jmcq rschulz lp2 tmcphillips jfr myourshaw megraw GeeSharpMinor caseybrown xingxu guhjy shurjo gdb Bioinformatics
	Clustering gene-expression data with repeated measurements [My Copy] Genome Biology, Vol. 4, No. 5. (2003) by Ka Yeung, Mario Medvedovic, Roger Bumgarner posted to clustering microarray by ghattem to the group SIMR bioinformatics on 2009-04-07 19:26:27 as along with 1 person aviad_work
	Using repeated measurements to validate hierarchical gene clusters. [My Copy] Bioinformatics (19 January 2008) by Laurent Bréhélin, Olivier Gascuel, Olivier Martin posted to bootstrap clustering microarray by ghattem to the group SIMR bioinformatics on 2009-04-07 16:19:55 as along with 4 people jfr shigepong dfournier guhjy
	Bootstrapping cluster analysis: Assessing the reliability of conclusions from microarray experiments [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 98, No. 16. (31 July 2001), pp. 8961-8965. by M. Kathleen Kerr, Gary A. Churchill posted to bootstrap clustering microarray by ghattem to the group SIMR bioinformatics on 2009-04-07 16:18:58 as along with 6 people poirel nuin textoris pbellec briordan klo
	Uncoupling Time and Space in the Collinear Regulation of <italic>Hox</italic> Genes [My Copy] PLoS Genet, Vol. 5, No. 3. (6 March 2009), e1000398. by Patrick Tschopp, Basile Tarchini, François Spitz, Jozsef Zakany, Denis Duboule posted to hox by ghattem to the group SIMR bioinformatics on 2009-04-06 16:57:29 as along with 1 person inesdesantiago
	Reproducible clusters from microarray research: whither? [My Copy] BMC Bioinformatics, Vol. 6 Suppl 2 (15 July 2005) by N. R. Garge, G. P. Page, A. P. Sprague, B. S. Gorman, D. B. Allison posted to clustering microarray by ghattem to the group SIMR bioinformatics on 2009-03-13 21:24:12 as along with 1 person jfr
	New resampling method for evaluating stability of clusters [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (2008) by Irina G. Dresen, Tanja Boes, Johannes Huesing, Markus Neuhaeuser, Karl H. Joeckel posted to bootstrap clustering microarray by ghattem to the group SIMR bioinformatics on 2009-03-13 21:20:03 as along with 7 people and 1 group Dori2008 derwisch sobolevnrm RamuAnandakrishnan jfr guhjy aviad_work baker-group
	Evaluation of clustering algorithms for gene expression data. [My Copy] BMC bioinformatics, Vol. 7 Suppl 4 (2006) by S. Datta, S. Datta posted to clustering microarray by ghattem to the group SIMR bioinformatics on 2009-03-13 21:19:12 as along with 1 person dragonrez
	Artemis and ACT: viewing, annotating and comparing sequences stored in a relational database. [My Copy] Bioinformatics (Oxford, England), Vol. 24, No. 23. (1 December 2008), pp. 2672-2676. by T. Carver, M. Berriman, A. Tivey, et al.C. Patel, U. Böhme, B. G. Barrell, J. Parkhill, M. A. Rajandream posted to annotation by malcook to the group SIMR bioinformatics on 2009-02-26 15:36:03 as along with 8 people guhjy dswan neils barriot pengchy jamselem treangen druvus
	Comparison of small n statistical tests of differential expression applied to microarrays. [My Copy] BMC bioinformatics, Vol. 10, No. 1. (2009) by Carl Murie, Owen Woody, Anna Y. Lee, Robert Nadon posted to microarray by ghattem to the group SIMR bioinformatics on 2009-02-03 16:47:49 as along with 10 people and 1 group hzoltan zufar guhjy daforerog rdiaz renatomilani dswan Zephyrus behindtherabbit druvus Bioinformatics
	PeakSeq enables systematic scoring of ChIP-seq experiments relative to controls. [My Copy] Nature biotechnology, Vol. 27, No. 1. (04 January 2009), pp. 66-75. by Joel Rozowsky, Ghia Euskirchen, Raymond K. Auerbach, et al.Zhengdong D. Zhang, Theodore Gibson, Robert Bjornson, Nicholas Carriero, Michael Snyder, Mark B. Gerstein posted to chip-seq peak_finding software by ghattem to the group SIMR bioinformatics on 2009-01-27 15:24:04 as along with 18 people hzoltan fpattyn gdb huali ewilban1 fenghezi smiddha jfr bertelsen JeremyZucker cassj inesdesantiago dakelley abizar polivares idonaldson WanderingAengus guhjy
	Use of normalization methods for analysis of microarrays containing a high degree of gene effects [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (2008) by Terri Ni, William Lemon, Yu Shyr, Tao Zhong posted to microarray normalization by ghattem to the group SIMR bioinformatics on 2009-01-13 16:08:02 as along with 5 people jfr guhjy dswan barriot GeeSharpMinor
	Global rank-invariant set normalization (GRSN) to reduce systematic distortions in microarray data. [My Copy] BMC bioinformatics, Vol. 9, No. 1. (2008) by C. R. Pelz, M. Kulesz-Martin, G. Bagby, R. C. Sears posted to microarray normalization by ghattem to the group SIMR bioinformatics on 2009-01-13 16:07:41 as along with 3 people jfr guhjy GeeSharpMinor
	High-throughput SELEX-SAGE method for quantitative modeling of transcription-factor binding sites [My Copy] Nat Biotech, Vol. 20, No. 8. (August 2002), pp. 831-835. by Emmanuelle Roulet, Stephane Busso, Anamaria A. Camargo, Andrew J. Simpson, Nicolas Mermod, Philipp Bucher posted to selex tfbs by malcook to the group SIMR bioinformatics on 2009-01-08 21:17:29 as along with 1 person absterga
	Systematic evolution of ligands by exponential enrichment: RNA ligands to bacteriophage T4 DNA polymerase [My Copy] Science, Vol. 249, No. 4968. (3 August 1990), pp. 505-510. by C. Tuerk, L. Gold posted to selex by malcook to the group SIMR bioinformatics on 2009-01-08 21:15:01 as along with 3 people and 2 groups absterga indigoviolet jonathanjacobs EisenLab Molecular Biology
	De novo assembly of the Pseudomonas syringae pv. syringae B728a genome using Illumina/Solexa short sequence reads. [My Copy] FEMS microbiology letters (9 December 2008) by Rhys A A. Farrer, Eric Kemen, Jonathan D G D. Jones, David J J. Studholme posted to assembly illumina by malcook to the group SIMR bioinformatics on 2008-12-29 06:53:20 as along with 9 people and 1 group shabhonam pachorip sandfire natstreet Huub_odc usagi-kirin abizar GustavoLacerda druvus microbiology_nijmegen
	Gene Networks in Development and Evolution Special Feature Sackler Colloquium: A regulatory module embedded in the coding region of Hoxa2 controls expression in rhombomere 2. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 105, No. 51. (23 December 2008), pp. 20077-20082. by S. Tümpel, F. Cambronero, C. Sims, R. Krumlauf, L. M. Wiedemann posted to hox simr by malcook to the group SIMR bioinformatics on 2008-12-29 05:10:16 as
	High quality draft sequences for prokaryotic genomes using a mix of new sequencing technologies. [My Copy] BMC genomics, Vol. 9, No. 1. (16 December 2008), 603. by Jean-Marc M. Aury, Corinne Cruaud, Valérie Barbe, et al.Odile Rogier, Sophie Mangenot, Gaelle Samson, Julie Poulain, Véronique Anthouard, Claude Scarpelli, François Artiguenave, Patrick Wincker posted to 454 assembly illumina nextgen by malcook to the group SIMR bioinformatics on 2008-12-29 05:04:29 as along with 8 people and 1 group usagi-kirin abizar acn natstreet pengchy GustavoLacerda druvus neils DeNovoAssembly-SIMR
	GPAT: retrieval of genomic annotation from large genomic position datasets. [My Copy] BMC bioinformatics, Vol. 9, No. 1. (2008) by A. Krebs, M. Frontini, L. Tora posted to chip-chip chip-seq software by ghattem to the group SIMR bioinformatics on 2008-12-19 14:42:49 as along with 5 people guhjy abizar druvus fhalbrit neils
	Empirical methods for controlling false positives and estimating confidence in ChIP-Seq peaks [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (2008), 523. by David Nix, Samir Courdy, Kenneth Boucher posted to chip-seq by ghattem to the group SIMR bioinformatics on 2008-12-10 20:12:37 as along with 9 people and 1 group darian gdb slv23 inesdesantiago ewilban1 floatingpoint WanderingAengus magusina caseybrown Bioinformatics - CRUK
	Analyzing gene expression data in terms of gene sets: methodological issues [My Copy] Bioinformatics, Vol. 23, No. 8. (15 April 2007), pp. 980-987. by Jelle J. Goeman, Peter Buhlmann posted to gene_ontology gene_set hypergeometric by ghattem to the group SIMR bioinformatics on 2008-12-08 16:34:54 as along with 19 people and 2 groups hzoltan zufar srp33 bertelsen jperkins ptrobajo VGreiff tonamswish ipark-kaist aramesh2 ydhwang shikin raiyar jfr ealloza shigepong heliopais guhjy diging_data BioinfoCIPF BTS-PT-AS-CS
	Advantages and limitations of next-generation sequencing technologies: a comparison of electrophoresis and non-electrophoresis methods. [My Copy] Electrophoresis, Vol. 29, No. 23. (3 December 2008), pp. 4618-4626. by Daniel G. Hert, Christopher P. Fredlake, Annelise E. Barron posted to no-tag by malcook to the group SIMR bioinformatics on 2008-12-07 01:42:23 as along with 3 people jbhiatt pkonings jasontsai

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multiple_testing	1
mutation	1
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simr	1
snp	1

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