Group: FAB-lab - with tag amino-acid [22 articles] Export

Recent papers posted by members of the FAB-lab group with tag amino-acid

	The universal distribution of evolutionary rates of genes and distinct characteristics of eukaryotic genes of different apparent ages [My Copy] Proceedings of the National Academy of Sciences (7 April 2009) by Yuri I. Wolf, Pavel S. Novichkov, Georgy P. Karev, Eugene V. Koonin, David J. Lipman posted to adaptation amino-acid divergence estimation genetics genome methods models protein rates selection sequence-evolution statistics by rvosa to the group FAB-lab on 2009-04-24 09:19:23 as along with 4 people RamuAnandakrishnan deanmalmgren jjray gjuggler
	Reliabilities of identifying positive selection by the branch-site and the site-prediction methods [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 16. (21 April 2009), pp. 6700-6705. by Masafumi Nozawa, Yoshiyuki Suzuki, Masatoshi Nei posted to adaptation amino-acid likelihood methods protein selection substitution-models vertebrates by rvosa to the group FAB-lab on 2009-04-24 09:15:52 as along with 8 people ckenaley sameersoi djkt ramiro2k gjuggler bpcusack atphan gulsacan
	Quantification of Adaptive Evolution of Genes Expressed in Avian Brain and the Population Size Effect on the Efficacy of Selection [My Copy] Mol Biol Evol, Vol. 26, No. 5. (1 May 2009), pp. 1073-1079. by Erik Axelsson, Hans Ellegren posted to amino-acid birds divergence encephalization evolution humans population-genetics protein selection by rvosa to the group FAB-lab on 2009-04-24 09:10:33 as along with 1 person gjuggler
	Pandit: a database of protein and associated nucleotide domains with inferred trees. [My Copy] Bioinformatics (Oxford, England), Vol. 19, No. 12. (12 August 2003), pp. 1556-1563. by S. Whelan, P. I. de Bakker, N. Goldman posted to alignment amino-acid databases dna evolution homology likelihood methods models phylogenomics phylogeny phyloinformatics protein proteins sequence by rvosa to the group FAB-lab on 2008-12-18 02:07:34 as along with 1 person mcox
	PANDIT: an evolution-centric database of protein and associated nucleotide domains with inferred trees. [My Copy] Nucleic Acids Res, Vol. 34, No. Database issue. (1 January 2006) by S. Whelan, P. I. de Bakker, E. Quevillon, N. Rodriguez, N. Goldman posted to alignment amino-acid data-mining databases dna evolution homology methods phylogeny protein proteins sequence by rvosa to the group FAB-lab on 2008-12-18 02:00:54 as along with 1 person Schmidtc
	Detecting lineage-specific adaptive evolution of brain-expressed genes in human using rhesus macaque as outgroup [My Copy] Genomics, Vol. 88, No. 6. (December 2006), pp. 745-751. by Xiao-Jing Yu, Hong-Kun Zheng, Jun Wang, Wen Wang, Bing Su posted to adaptation alignment amino-acid animals anthropology clock-like comparative data-mining divergence dna encephalization evolution genetics genome hominidae humans mammals models phylogenomics primates protein proteins proteomics rates ratio-test selection sequence-evolution by rvosa to the group FAB-lab on 2008-08-12 08:00:48 as along with 1 person kndiaye
	Evolutionary divergence and convergence in proteins [My Copy] In Evolving Genes and Proteins (1965), pp. 97-165. by E. Zuckercandl, L. Pauling edited by V. Bryson, H. J. Vogel posted to amino-acid bibtex-import clock-like divergence evolution protein rates by rvosa to the group FAB-lab on 2008-02-06 23:58:31 as along with 1 person balicea
	Organization and evolution of multifunctional Ca2+/CaM-dependent protein kinase genes [My Copy] Gene, Vol. 322 (2003), pp. 17-31. by Robert M. Tombes, Omar M. Faison, J. M. Turbeville posted to amino-acid bibtex-import evolution likelihood protein sequence-evolution by rvosa to the group FAB-lab on 2008-02-06 23:58:28 as
	Amino acid vs. nucleotide characters: challenging preconceived notions [My Copy] Molecular Phylogenetics and Evolution, Vol. 24 (2002), pp. 78-90. by M. P. Simmons, H. Ochoterena, J. V. Freudenstein posted to amino-acid bibtex-import characters dna methods phylogeny by rvosa to the group FAB-lab on 2008-02-06 23:58:26 as
	Sequences and Evolution of Human and Squirrel Monkey Blue Opsin Genes [My Copy] Journal of Molecular Evolution, Vol. 44 (1997), pp. 378-382. by L. C. Shimmin, P. Mai, Wen H. Li posted to amino-acid animals bibtex-import mammals primates protein sequence-evolution source-trees vertebrates vision by rvosa to the group FAB-lab on 2008-02-06 23:58:26 as
	Are Ichthyosporea animals or fungi? Bayesian phylogenetic analysis of elongation factor 1 alpha of Ichthyophonus irregularis [My Copy] Molecular Phylogenetics and Evolution, Vol. 29, No. 3. (2003), pp. 550-562. by M. A. Ragan, C. A. Murphy, T. G. Rand posted to amino-acid animals bayesian bibtex-import fungi parsimony phenetics phylogeny rna by rvosa to the group FAB-lab on 2008-02-06 23:58:22 as
	NJML+: An extension of the NJML method to handle protein sequence data and computer software implementation [My Copy] Molecular Biology and Evolution, Vol. 18, No. 11. (2001), pp. 1983-1992. by S. Ota, W. H. Li posted to algorithms amino-acid bibtex-import likelihood methods phenetics protein software by rvosa to the group FAB-lab on 2008-02-06 23:58:19 as
	A Reassessment of Mammalian aA-Crystallin Sequences Using DNA Sequencing: Implications for Anthropoid Affinities of Tarsier [My Copy] Journal of Molecular Evolution, Vol. 41 (1995), pp. 901-908. by C. J. Jaworski posted to amino-acid animals bibtex-import dna mammals nuclear primates protein sequence source-trees vertebrates vision by rvosa to the group FAB-lab on 2008-02-06 23:58:14 as
	Phylogenetic Relationships of the Callitrichinae (Platyrrhini, Primates) Based on b2-Microglobulin DNA Sequences [My Copy] American Journal of Primatology, Vol. 48 (1999), pp. 225-236. by Flavio C. Canavez, Miguel A. M. Moreira, Faical Simon, Peter Parham, Hector N. Seuanez posted to amino-acid animals bibtex-import dna mammals nuclear phylogeny primates protein source-trees vertebrates by rvosa to the group FAB-lab on 2008-02-06 23:58:04 as
	Quantifying the symbiont contribution to essential amino acids in aphids: the importance of tryptophan for Uroleucon ambrosiae [My Copy] Physiological entomology, Vol. 27, No. 4. (2002), pp. 275-284. by E. A. Bernays, B. A. Klein posted to amino-acid animals bibtex-import insects invertebrates by rvosa to the group FAB-lab on 2008-02-06 23:58:03 as
	Molecular Evolution of Two Linked Genes, Est-6 and Sod, in Drosophila melanogaster [My Copy] Genetics, Vol. 153 (1999), pp. 1357-1369. by E. S. Balakirev, E. I. Balakirev, Rodriguez F. Trelles, F. J. Ayala posted to amino-acid animals bibtex-import insects invertebrates polymorphism selection sequence-evolution by rvosa to the group FAB-lab on 2008-02-06 23:58:02 as
	Improved Dating of the Human Chimpanzee Separation in the Mitochondrial-DNA Tree - Heterogeneity among Amino-Acid Sites [My Copy] Journal of Molecular Evolution, Vol. 40, No. 6. (1995), pp. 622-628. by J. Adachi, M. Hasegawa posted to amino-acid animals bibtex-import clock-like dna hominidae humans likelihood mammals mitochondrial phylogeny primates sequence source-trees substitution-models vertebrates by rvosa to the group FAB-lab on 2008-02-06 23:58:01 as
	Cophenetic correlation analysis as a strategy to select phylogenetically informative proteins: an example from the fungal kingdom [My Copy] BMC Evolutionary Biology, Vol. 7 (09 August 2007), 134. by Eiko E. Kuramae, Vincent Robert, Carlos Echavarri-Erasun, Teun Boekhout posted to algorithms amino-acid data-mining fungi methods phylogenomics phylogeny phyloinformatics proteins by rvosa to the group FAB-lab on 2008-02-01 11:30:06 as along with 2 people and 1 group echinotrix stajich Mycology
	Phylogenomic analysis of non-ribosomal peptide synthetases in the genus Aspergillus. [My Copy] Gene, Vol. 383 (15 November 2006), pp. 24-32. by R. A. Cramer, J. E. Stajich, Y. Yamanaka, F. S. Dietrich, W. J. Steinbach, J. R. Perfect posted to amino-acid data-mining dna methods phylogenomics proteins by rvosa to the group FAB-lab on 2008-02-01 11:22:31 as along with 1 person stajich
	New Approaches to Phylogenetic Tree Search and Their Application to Large Numbers of Protein Alignments [My Copy] Systematic Biology, Vol. 56, No. 5. (2007), pp. 727-740. by Simon Whelan posted to algorithms amino-acid methods phylogeny proteins software by rvosa to the group FAB-lab on 2008-02-01 11:11:01 as along with 1 person stajich
	Distinguishing protein-coding and noncoding genes in the human genome [My Copy] Proceedings of the National Academy of Sciences, Vol. 104, No. 49. (4 December 2007), pp. 19428-19433. by Michele Clamp, Ben Fry, Mike Kamal, et al.Xiaohui Xie, James Cuff, Michael F. Lin, Manolis Kellis, Kerstin Lindblad-Toh, Eric S. Lander posted to algorithms amino-acid animals data-mining genetics genome hominidae homology humans mammals methods phylogenomics primates proteins rna sequence vertebrates by rvosa to the group FAB-lab on 2008-02-01 11:04:06 as along with 17 people and 2 groups antonkratz jo_davies tmmurali balicea sebastien_vigneau giovanni neils stajich cjeans cabbagezs maximilianh oelemento gjuggler slroberd renatomilani gracio Ema EisenLab Mycology
	Heads or Tails: A Simple Reliability Check for Multiple Sequence Alignments [My Copy] Mol Biol Evol, Vol. 24, No. 6. (1 June 2007), pp. 1380-1383. by Giddy Landan, Dan Graur posted to algorithms alignment amino-acid data-mining dna methods phylogeny phyloinformatics sequence by rvosa to the group FAB-lab on 2008-02-01 11:01:06 as along with 9 people treangen druvus aprasad BioNica stajich cjeans zwang lilou mailund

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protein	22
methods	20
evolution	13
data-mining	12
dna	10
phylogenomics	10
phylogeny	10
sequence	10
algorithms	8
alignment	8
genome	8
selection	8
divergence	7
proteins	7
adaptation	6
genetics	6
homology	6
humans	6
models	6
phyloinformatics	6
mammals	5
primates	5
rates	5
sequence-evolution	5
animals	4
databases	4
encephalization	4
hominidae	4
likelihood	4
statistics	4
vertebrates	4
15n	3
clock-like	3
matrix	3
peptide	3
software	3
substitution	3
13c	2
alpha-helix	2
amino-acids	2
anthropology	2
birds	2
comparative	2
composition	2
dbhack1	2
epidemiology	2
estimation	2
fungi	2
helix	2
mutation	2
mycorrhizae	2
population-genetics	2
proteomics	2
ratio-test	2
read	2
review	2
rna	2
structure	2
substitution-models	2
uptake	2
2005-52	1
2006-66	1
2007-59	1
agricultutal_soils	1
analysis	1
arginine	1
bioinformatics	1
bradyrhizobium-japonicum	1
catalyst	1
chemosensory-behavior	1
chemotaxis	1
codon-usage	1
database	1
exudates	1
feeding	1
fluorescence	1
food-web	1
function	1
immunoreactivity	1
internet	1
isotope	1
motifs	1
odor-plume	1
peptides	1
phosphorylation	1
physorg	1
plant	1
properties	1
radical	1
rhizosphere	1
signal	1
sorption	1
soybean	1
statistical	1
substitution-matrix	1
tannins	1
temperature	1
tundra	1
unnaturalaa	1
usage	1

Group: FAB-lab - with tag amino-acid [22 articles] Export

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