Group: FAB-lab - with tag phylogeny [at least 200 articles] Export

Recent papers posted by members of the FAB-lab group with tag phylogeny

	PhyloPattern: regular expressions to identify complex patterns in phylogenetic trees [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (19 September 2009), 298. by Philippe Gouret, Julie Thompson, Pierre Pontarotti posted to software sequence-evolution protein phyloinformatics phylogeny genome evolution by rvosa to the group FAB-lab on 2009-11-11 03:43:20 as along with 5 people and 1 group nuin stajich scmelton druvus rschulz Mycology
	BEAST: Bayesian evolutionary analysis by sampling trees. [My Copy] BMC evolutionary biology, Vol. 7, No. 1. (08 November 2007), 214. by Alexei J. Drummond, Andrew Rambaut posted to algorithms bayesian markov-chains methods phylogeny phyloinformatics software xml by rvosa to the group FAB-lab on 2009-05-22 07:02:11 as along with 4 people lizbiogen operon druvus treangen
	A Linear-Time Majority Tree Algorithm [My Copy] Algorithms in Bioinformatics (2003), pp. 216-227. by Nina Amenta, Frederick Clarke, Katherine St. John posted to algorithms graph methods phylogeny phyloinformatics software topology by rvosa to the group FAB-lab on 2008-12-18 02:35:27 as
	Abstract A Randomized Linear-time Majority Tree Algorithm [My Copy] by Nina Amenta, Frederick Clarke, Katherine St. John posted to algorithms data-mining methods phylogeny phyloinformatics software by rvosa to the group FAB-lab on 2008-12-18 02:26:43 as
	MAXIMUM LIKELIHOOD FRAMEWORK FOR GENETIC SEQUENCE ANALYSIS [My Copy] by Sergei L. Pond posted to algorithms dna estimation inference likelihood methods models phylogeny phyloinformatics sequence-evolution substitution-models by rvosa to the group FAB-lab on 2008-12-18 02:20:48 as
	Pandit: a database of protein and associated nucleotide domains with inferred trees. [My Copy] Bioinformatics (Oxford, England), Vol. 19, No. 12. (12 August 2003), pp. 1556-1563. by S. Whelan, P. I. de Bakker, N. Goldman posted to alignment amino-acid databases dna evolution homology likelihood methods models phylogenomics phylogeny phyloinformatics protein proteins sequence by rvosa to the group FAB-lab on 2008-12-18 02:07:34 as along with 1 person mcox
	PANDIT: an evolution-centric database of protein and associated nucleotide domains with inferred trees. [My Copy] Nucleic Acids Res, Vol. 34, No. Database issue. (1 January 2006) by S. Whelan, P. I. de Bakker, E. Quevillon, N. Rodriguez, N. Goldman posted to alignment amino-acid data-mining databases dna evolution homology methods phylogeny protein proteins sequence by rvosa to the group FAB-lab on 2008-12-18 02:00:54 as along with 1 person Schmidtc
	Mixture models in phylogenetic inference [My Copy] (28 April 2008) by Mark Pagel posted to bayesian markov-chains methods monte-carlo phylogeny rates substitution-models by rvosa to the group FAB-lab on 2008-08-18 02:27:00 as
	The Tree of Life Web Project [My Copy] Zootaxa, No. 1668. (2007), pp. 19-40. by David R. Maddison, Katja-Sabine Schulz, Wayne P. Maddison posted to biodiversity databases data-mining evolution phylogeny phyloinformatics taxonomy by rvosa to the group FAB-lab on 2008-08-13 01:07:30 as
	Cases in which Parsimony or Compatibility Methods Will be Positively Misleading [My Copy] Systematic Zoology, Vol. 27, No. 4. (1978), pp. 401-410. by Joseph Felsenstein posted to characters inference methods parsimony phylogeny by rvosa to the group FAB-lab on 2008-08-12 05:17:15 as
	Large Punctuational Contribution of Speciation to Evolutionary Divergence at the Molecular Level [My Copy] Science, Vol. 314, No. 5796. (6 October 2006), pp. 119-121. by Mark Pagel, Chris Venditti, Andrew Meade posted to clock-like divergence dna evolution phylogeny rates speciation substitution-models by rvosa to the group FAB-lab on 2008-08-09 11:44:51 as along with 5 people and 1 group vtraag knaseanka brant bpcusack shikin EisenLab
	Phylogenetic Mixture Models Can Reduce Node-Density Artifacts [My Copy] Systematic Biology, Vol. 57, No. 2. (2008), pp. 286-293. by Chris Venditti, Andrew Meade, Mark Pagel posted to inference methods models phylogeny sequence-evolution substitution-models by rvosa to the group FAB-lab on 2008-08-09 10:43:23 as along with 1 person aprasad
	A Phylogenetic Mixture Model for Detecting Pattern-Heterogeneity in Gene Sequence or Character-State Data [My Copy] Syst Biol, Vol. 53, No. 4. (1 August 2004), pp. 571-581. by Mark Pagel, Andrew Meade posted to characters genetics methods models phylogeny sequence substitution-models by rvosa to the group FAB-lab on 2008-08-09 10:21:04 as along with 1 person djohnson
	Assembly rules for protein networks derived from phylogenetic-statistical analysis of whole genomes [My Copy] BMC Evolutionary Biology, Vol. 7, No. Suppl 1. (2007) by Mark Pagel, Andrew Meade, Daniel Scott posted to genome networks phylogenomics phylogeny protein statistics by rvosa to the group FAB-lab on 2008-08-09 09:25:02 as
	Myxozoa, Polypodium, and the origin of the Bilateria: the phylogenetic position of Endocnidozoa in light of the rediscovery of Buddenbrockia [My Copy] Cladistics-the International Journal of the Willi Hennig Society, Vol. 19, No. 2. (2003), pp. 164-169. by J. Zrzavy, V. Hypsa posted to animals bibtex-import classification phylogeny by rvosa to the group FAB-lab on 2008-02-06 23:58:31 as
	Phylogenetic affinities of tarsier in the context of primate Alu repeats [My Copy] Molecular Phylogenetics and Evolution, Vol. 11 (1999), pp. 77-83. by Ewa Zietkiewicz, Chantal Richer, Damian Labuda posted to animals bibtex-import mammals phylogeny primates sequence-evolution vertebrates by rvosa to the group FAB-lab on 2008-02-06 23:58:31 as
	Phylogeny of rhesus monkeys (Macaca mulatta) as revealed by mitochondrial DNA restriction enzyme analysis [My Copy] International Journal of Primatology, Vol. 14 (1993), pp. 587-605. by Y. P. Zhang, L. M. Shi posted to animals bibtex-import mammals mitochondrial phylogeny primates protein restriction vertebrates by rvosa to the group FAB-lab on 2008-02-06 23:58:31 as
	Mitochondrial Cytochrome b Gene Sequences of Old World Monkeys: With Special Reference on Evolution of Asian Colobines [My Copy] Primates, Vol. 39, No. 1. (1998), pp. 39-49. by Ya P. Zhang, Oliver A. Ryder posted to animals bibtex-import colobinae dna evolution mammals mitochondrial phylogeny primates source-trees vertebrates by rvosa to the group FAB-lab on 2008-02-06 23:58:31 as
	Phylogenetic Relationships of Macaques as Inferred from Restriction Endonuclease Analysis of Mitochondrial DNA [My Copy] Folia Primatologia, Vol. 60 (1993), pp. 7-17. by Ya P. Zhang, Shi L. Ming posted to animals bibtex-import genetics mammals mitochondrial phylogeny polymorphism primates restriction vertebrates by rvosa to the group FAB-lab on 2008-02-06 23:58:31 as
	Strepsirrhine phylogeny: Congruence of results from a mitochondrial and a nuclear gene [My Copy] American Journal of Physical Anthropology, Vol. 22 (1996) by A. D. Yoder posted to animals bibtex-import mammals mitochondrial nuclear phylogeny primates source-trees strepsirrhines vertebrates by rvosa to the group FAB-lab on 2008-02-06 23:58:31 as
	Bayesian Phylogenetic Inference Using DNA Sequences: A Markov Chain Monte Carlo Method [My Copy] Molecular Biology and Evolution, Vol. 14, No. 7. (1997), pp. 717-724. by Ziheng Yang, Bruce Rannala posted to bayesian bibtex-import diversification extinction markov-chains monte-carlo phylogeny speciation substitution-models by rvosa to the group FAB-lab on 2008-02-06 23:58:30 as
	Classification and evolution of Asian colobines [My Copy] Folia Primatologia, Vol. 60 (1993), pp. 106-117. by Peng Y. Zhang, Ru P. Liang, Nina G. Jablonski posted to bibtex-import classification colobinae evolution morphology phylogeny taxonomy by rvosa to the group FAB-lab on 2008-02-06 23:58:30 as
	The mitochondrial DNA molecule of Sumatran orangutan and a molecular proposal for two (Bornean and Sumatran) species of orangutan [My Copy] Journal of Molecular Evolution, Vol. 43 (1996), pp. 431-437. by X. Xu, U. Arnason posted to animals bibtex-import mammals mitochondrial phylogeny primates vertebrates by rvosa to the group FAB-lab on 2008-02-06 23:58:30 as
	Molecular phylogeny of the temperate herbaceous tribes of papilionoid legumes: a supertree approach [My Copy] In Advances in Legume Systematics, Vol. 9 (2000), pp. 277-298. by M. F. Wojciechowski, Michael J. Sanderson, K. P. Steele, A. Liston edited by P. Herendeen, A. Bruneau posted to bibtex-import mrp phylogeny plants supertree by rvosa to the group FAB-lab on 2008-02-06 23:58:30 as
	The phylogenetic relationships of the cyanobacterial lichens in the Lecanorales suborder Peltigerineae [My Copy] Cladistics-the International Journal of the Willi Hennig Society, Vol. 19, No. 5. (2003), pp. 419-431. by E. Wiklund, M. Wedin posted to bacteria bibtex-import classification fungi mitochondrial nuclear parsimony phylogeny weighting by rvosa to the group FAB-lab on 2008-02-06 23:58:30 as
	When are phylogenetic analyses misled by convergence? A case study in Texas cave salamanders [My Copy] Systematic Biology, Vol. 52, No. 4. (2003), pp. 501-514. by J. J. Wiens, P. T. Chippindale, D. M. Hillis posted to adaptation bibtex-import evolution mitochondrial morphology phylogeny protein selection by rvosa to the group FAB-lab on 2008-02-06 23:58:30 as
	Missing data, incomplete taxa, and phylogenetic accuracy [My Copy] Systematic Biology, Vol. 52, No. 4. (2003), pp. 528-538. by J. J. Wiens posted to bibtex-import characters data-mining fossils methods parsimony phylogeny phyloinformatics simulation by rvosa to the group FAB-lab on 2008-02-06 23:58:30 as
	A novel method for economical diagnosis of cladograms under Sankoff optimization [My Copy] Cladistics, Vol. 10 (1994), pp. 207-213. by Ward C. Wheeler, Kevin Nixon posted to algorithms bibtex-import methods parsimony phylogeny by rvosa to the group FAB-lab on 2008-02-06 23:58:30 as
	Iterative pass optimization of sequence data [My Copy] Cladistics-the International Journal of the Willi Hennig Society, Vol. 19, No. 3. (2003), pp. 254-260. by W. C. Wheeler posted to algorithms alignment bibtex-import methods phylogeny sequence by rvosa to the group FAB-lab on 2008-02-06 23:58:30 as
	Combinatorial weights in phylogenetic analysis: a statistical parsimony procedure [My Copy] Cladistics, Vol. 6 (1990), pp. 269-275. by Ward C. Wheeler posted to algorithms bibtex-import methods parsimony phylogeny weighting by rvosa to the group FAB-lab on 2008-02-06 23:58:30 as
	Noise [My Copy] Cladistics, Vol. 15 (1999), pp. 51-64. by John W. Wenzel, Mark E. Siddall posted to bibtex-import methods parsimony phylogeny by rvosa to the group FAB-lab on 2008-02-06 23:58:30 as
	Chromosome Painting Technique Contributes to Constructions of Evolutionary Trees of Lemurs [My Copy] International Journal of Primatology, Vol. 21, No. 5. (2000), pp. 905-913. by S. Warter, M. Hauwy, Yves Rumpler posted to animals bibtex-import karyotyping lemuridae mammals phylogeny primates source-trees vertebrates by rvosa to the group FAB-lab on 2008-02-06 23:58:30 as
	rDNA difference and phylogenetic relationships of two species of golden monkeys and three species of leaf monkeys [My Copy] In Primate Research and Conservation (1995) by W. Wang, B. Su, H. Lan, et al.Y. P. Zhang, S. Y. Lin, R. Q. Liu, A. H. Liu, H. G. Hu, Y. X. Xie, D. H. Wu edited by W. P. Xia, Y. Z. Zhang posted to animals bibtex-import mammals phylogeny primates vertebrates by rvosa to the group FAB-lab on 2008-02-06 23:58:30 as
	Phylogenetic Relationships among Two Species of Golden Monkey and Three Species of Leaf Monkey Inferred from rDNA Variation [My Copy] Folia Primatologia, Vol. 65 (1995), pp. 138-143. by Wen Wang, Bing Su, Hong Lan, et al.Ya P. Zhang, Shi Y. Lin, Ai H. Liu, Rui Q. Liu, Wei Z. Ji, Hong G. Hu, You X. Xie, Deng H. Wu posted to animals bibtex-import dna mammals phylogeny primates restriction source-trees vertebrates by rvosa to the group FAB-lab on 2008-02-06 23:58:29 as
	A phylogeny of Chinese leaf monkeys using mitochondrial ND3-ND4 gene sequences [My Copy] International Journal of Primatology, Vol. 18 (1997), pp. 305-320. by Wen Wang, Michael R. J. Forstner, Ya P. Zhang, et al. Liu, Y. Wei, Huang, Hong G. Hu, You X. Xie, Deng H. Wu, Don J. Melnick posted to animals bibtex-import dna mammals mitochondrial phylogeny primates sequence source-trees vertebrates by rvosa to the group FAB-lab on 2008-02-06 23:58:29 as
	Comparison between phylogeny of introns and exons in primates [My Copy] Chinese Science Bulletin, Vol. 44, No. 21. (1999), pp. 1940-1946. by N. Wang, R. Chen posted to animals bibtex-import evolution inference mammals phylogeny primates sequence-evolution substitution-models vertebrates by rvosa to the group FAB-lab on 2008-02-06 23:58:29 as
	Morphology versus molecules: resolution of the positions of Nymphalis, Polygonia, and related genera (Lepidoptera: Nymphalidae) [My Copy] Cladistics-the International Journal of the Willi Hennig Society, Vol. 19, No. 3. (2003), pp. 213-223. by N. Wahlberg, S. Nylin posted to animals bibtex-import classification insects invertebrates morphology phylogeny sequence taxonomy by rvosa to the group FAB-lab on 2008-02-06 23:58:29 as
	The description of a new marmoset genus, Callicebus (Callitrichinae, Primates), including its molecular phylogenetic status [My Copy] Neotropical Primates, Vol. 11 (2003), pp. 1-10. by M. G. M. van Roosmalen, T. van Roosmalen posted to animals bibtex-import classification mammals phylogeny primates taxonomy vertebrates by rvosa to the group FAB-lab on 2008-02-06 23:58:29 as
	Rapid radiation of the Mediterranean Luciobarbus species (Cyprinidae) after the Messinian salinity crisis of the Mediterranean Sea, inferred from mitochondrial phylogenetic analysis [My Copy] Biological Journal of the Linnean Society, Vol. 80, No. 2. (2003), pp. 207-222. by C. S. Tsigenopoulos, J. D. Durand, E. Unlu, P. Berrebi posted to animals bibtex-import biogeography fishes mitochondrial morphology phylogeny radiation speciation vertebrates by rvosa to the group FAB-lab on 2008-02-06 23:58:28 as
	The influence of phylogeny on the social behaviour of macaques (Primates : Cercopithecidae, genus Macaca) [My Copy] Ethology, Vol. 106, No. 8. (2000), pp. 713-728. by B. Thierry, A. N. Iwaniuk, S. M. Pellis posted to animals behaviour bibtex-import mammals phylogeny primates reconstruction sociality vertebrates by rvosa to the group FAB-lab on 2008-02-06 23:58:28 as
	'Little Brown Lemurs' of Northern Madagascar [My Copy] Folia Primatologia, Vol. 69 (1998), pp. 379-388. by I. Tattersall, R. W. Sussman posted to animals bibtex-import biodiversity ecology lemuridae mammals phylogeny primates source-trees vertebrates by rvosa to the group FAB-lab on 2008-02-06 23:58:28 as
	Phylogenetic relationships of the genus Macaca inferred from DNA sequence [My Copy] In International Symposium: Evolution of Asian Primates (1996) by T. Tanaka, O. Takenaka posted to animals bibtex-import dna mammals phylogeny primates sequence vertebrates by rvosa to the group FAB-lab on 2008-02-06 23:58:28 as
	PAUP*: phylogenetic analysis using parsimony, version 4.0b10 [My Copy] (2003) by D. L. Swofford posted to bibtex-import likelihood parsimony phylogeny phyloinformatics software by rvosa to the group FAB-lab on 2008-02-06 23:58:28 as along with 1 person gjuggler
	Molecular phylogeny of wood mice (Apodemus, Muridae) in East Asia [My Copy] Biological Journal of the Linnean Society, Vol. 80, No. 3. (2003), pp. 469-481. by H. Suzuki, J. J. Sato, K. Tsuchiya, et al.J. Luo, Y. P. Zhang, Y. X. Wang, X. L. Jiang posted to animals bibtex-import clock-like ecology evolution mammals mice mitochondrial nuclear phylogeny radiation rodents speciation vertebrates by rvosa to the group FAB-lab on 2008-02-06 23:58:28 as
	Likelihood Analysis of Phylogenetic Networks Using Directed Graphical Models [My Copy] Molecular Biology and Evolution, Vol. 17, No. 6. (2000), pp. 875-881. by Korbinian Strimmer, Vincent Moulton posted to bayesian bibtex-import evolution graph likelihood markov-chains monte-carlo networks phylogeny by rvosa to the group FAB-lab on 2008-02-06 23:58:27 as
	Molecular phylogeny of the endemic Phillipine rodent Apomys (Muridae) and the dynamics of diversification in an oceanic archipelago [My Copy] Biological Journal of the Linnean Society, Vol. 80, No. 4. (2003), pp. 699-716. by S. J. Steppan, C. Zawadzki, L. R. Heany posted to animals bibtex-import biogeography diversification mammals mice phylogeny rodents vertebrates by rvosa to the group FAB-lab on 2008-02-06 23:58:27 as
	Ecological diversification and phylogeny of emydid turtles [My Copy] Biological Journal of the Linnean Society, Vol. 79, No. 4. (2003), pp. 577-610. by P. R. Stephens, J. J. Wiens posted to animals bibtex-import data-mining diversification ecology evolution mitochondrial morphology phylogeny phyloinformatics specialization vertebrates by rvosa to the group FAB-lab on 2008-02-06 23:58:27 as
	Distributions of Tree Comparison Metrics - Some New Results [My Copy] Systematic Biology, Vol. 42, No. 2. (1993), pp. 126-141. by M. A. Steel, D. Penny posted to algorithms bibtex-import evolution methods phylogeny topology by rvosa to the group FAB-lab on 2008-02-06 23:58:27 as along with 1 person druvus
	The maximum likelihood point for a phylogenetic tree is not unique [My Copy] Systematic Biology, Vol. 43 (1994), pp. 560-564. by M. A. Steel posted to bibtex-import likelihood methods phylogeny by rvosa to the group FAB-lab on 2008-02-06 23:58:27 as
	Inferring Complex Phylogenies Using Parsimony: An Empirical Approach Using Three Large DNA Data Sets for Angiosperms [My Copy] Systematic Biology, Vol. 47, No. 1. (1998), pp. 32-42. by D. E. Soltis, P. S. Soltis, M. E. Mort, et al.M. W. Chase, V. Savolainen, S. B. Hoot, C. M. Morton posted to bibtex-import data-mining parsimony phylogeny phyloinformatics plants by rvosa to the group FAB-lab on 2008-02-06 23:58:27 as

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evolution	388
plant	123
bioinformatics	104
software	95
alignment	91
genome	76
diversity	74
phylogenomics	68
methods	63
statistics	63
comparative	60
phylogenetics	57
reconstruction	56
taxonomy	56
review	52
islands	50
tree	46
bacteria	44
bayesian	44
celegans	41
elegans	41
sequence	41
article	40
c_elegans	40
caenorhabditis_elegans	40
likelihood	40
nematode	40
wormbase	40
contrasts	38
biogeography	37
genetics	35
algorithms	34
method	34
fungi	33
protein	33
genomics	32
protein_sequence	32
comparative_genomics	30
inference	30
metagenomics	30
phyloinformatics	30
its	29
gene	28
algorithm	27
molecular	27
clock-like	26
substitution-models	26
drosophila	25
cpdna	24
molecular_sequence_data	24
orthology	24
hgt	23
model	23
16s	22
classification	22
diversification	22
accuracy	21
sequence_comparison	21
these	21
amino_acid_sequence	20
data-mining	20
dna	20
network	19
human	18
prediction	18
selection	18
supertree	18
canary	17
divergence	17
population-genetics	17
speciation	17
adaptive-radiation	16
base_sequence	16
distance	16
evolutionary-genomics	16
morphology	16
protists	16
choanoflagellates	15
culture	15
models	15
ratio-test	15
indel	14
2007	13
ecology	13
family	13
have_as_pdf	13
history	13
marine	13
protein_evolution	13
sequence_alignment	13
systematics	13
archaea	12
database	12
francisella	12
homology	12
microbial-ecology	12
microeukaryotes	12
networks	12
prokaryotes	12
proteome	12

Group: FAB-lab - with tag phylogeny [at least 200 articles] Export

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