Group: FAB-lab - with tag protein [36 articles] Export

Recent papers posted by members of the FAB-lab group with tag protein

	DUF1220 Domains, Cognitive Disease, and Human Brain Evolution [My Copy] Cold Spring Harbor Symposia on Quantitative Biology (22 October 2009) by L. Dumas, J. M. Sikela posted to sequence protein humans genome evolution encephalization adaptation by rvosa to the group FAB-lab on 2009-11-27 14:19:36 as
	PhyloPattern: regular expressions to identify complex patterns in phylogenetic trees [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (19 September 2009), 298. by Philippe Gouret, Julie Thompson, Pierre Pontarotti posted to software sequence-evolution protein phyloinformatics phylogeny genome evolution by rvosa to the group FAB-lab on 2009-11-11 03:43:20 as along with 5 people and 1 group nuin stajich scmelton druvus rschulz Mycology
	Signatures of natural selection are not uniform across genes of innate immune system, but purifying selection is the dominant signature [My Copy] Proceedings of the National Academy of Sciences (9 April 2009) by Souvik Mukherjee, Neeta Sarkar-Roy, Diane K. Wagener, Partha P. Majumder posted to evolution genetics hominidae humans protein rates selection by rvosa to the group FAB-lab on 2009-04-25 01:56:58 as along with 1 person jasontsai
	The universal distribution of evolutionary rates of genes and distinct characteristics of eukaryotic genes of different apparent ages [My Copy] Proceedings of the National Academy of Sciences (7 April 2009) by Yuri I. Wolf, Pavel S. Novichkov, Georgy P. Karev, Eugene V. Koonin, David J. Lipman posted to adaptation amino-acid divergence estimation genetics genome methods models protein rates selection sequence-evolution statistics by rvosa to the group FAB-lab on 2009-04-24 09:19:23 as along with 4 people RamuAnandakrishnan deanmalmgren jjray gjuggler
	Reliabilities of identifying positive selection by the branch-site and the site-prediction methods [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 16. (21 April 2009), pp. 6700-6705. by Masafumi Nozawa, Yoshiyuki Suzuki, Masatoshi Nei posted to adaptation amino-acid likelihood methods protein selection substitution-models vertebrates by rvosa to the group FAB-lab on 2009-04-24 09:15:52 as along with 8 people ckenaley sameersoi djkt ramiro2k gjuggler bpcusack atphan gulsacan
	Quantification of Adaptive Evolution of Genes Expressed in Avian Brain and the Population Size Effect on the Efficacy of Selection [My Copy] Mol Biol Evol, Vol. 26, No. 5. (1 May 2009), pp. 1073-1079. by Erik Axelsson, Hans Ellegren posted to amino-acid birds divergence encephalization evolution humans population-genetics protein selection by rvosa to the group FAB-lab on 2009-04-24 09:10:33 as along with 1 person gjuggler
	Pandit: a database of protein and associated nucleotide domains with inferred trees. [My Copy] Bioinformatics (Oxford, England), Vol. 19, No. 12. (12 August 2003), pp. 1556-1563. by S. Whelan, P. I. de Bakker, N. Goldman posted to alignment amino-acid databases dna evolution homology likelihood methods models phylogenomics phylogeny phyloinformatics protein proteins sequence by rvosa to the group FAB-lab on 2008-12-18 02:07:34 as along with 1 person mcox
	PANDIT: an evolution-centric database of protein and associated nucleotide domains with inferred trees. [My Copy] Nucleic Acids Res, Vol. 34, No. Database issue. (1 January 2006) by S. Whelan, P. I. de Bakker, E. Quevillon, N. Rodriguez, N. Goldman posted to alignment amino-acid data-mining databases dna evolution homology methods phylogeny protein proteins sequence by rvosa to the group FAB-lab on 2008-12-18 02:00:54 as along with 1 person Schmidtc
	Immune system evolution among anthropoid primates: parasites, injuries and predators. [My Copy] Proceedings. Biological sciences / The Royal Society, Vol. 269, No. 1495. (22 May 2002), pp. 1031-1037. by S. Semple, G. Cowlishaw, P. M. Bennett posted to adaptation animals comparative ecology evolution mammals parasitism predation primates protein proteins sexual by rvosa to the group FAB-lab on 2008-08-13 22:43:09 as
	Detecting lineage-specific adaptive evolution of brain-expressed genes in human using rhesus macaque as outgroup [My Copy] Genomics, Vol. 88, No. 6. (December 2006), pp. 745-751. by Xiao-Jing Yu, Hong-Kun Zheng, Jun Wang, Wen Wang, Bing Su posted to adaptation alignment amino-acid animals anthropology clock-like comparative data-mining divergence dna encephalization evolution genetics genome hominidae humans mammals models phylogenomics primates protein proteins proteomics rates ratio-test selection sequence-evolution by rvosa to the group FAB-lab on 2008-08-12 08:00:48 as along with 1 person kndiaye
	Gene Ontology: tool for the unification of biology [My Copy] Nature Genetics, Vol. 25, No. 1. (01 May 2000), pp. 25-29. by Michael Ashburner, Catherine A. Ball, Judith A. Blake, et al.David Botstein, Heather Butler, J. Michael Cherry, Allan P. Davis, Kara Dolinski, Selina S. Dwight, Janan T. Eppig, Midori A. Harris, David P. Hill, Laurie Issel-Tarver, Andrew Kasarskis, Suzanna Lewis, John C. Matese, Joel E. Richardson, Martin Ringwald, Gerald M. Rubin, Gavin Sherlock posted to databases data-mining genetics genome ontology protein proteins proteomics by rvosa to the group FAB-lab on 2008-08-11 08:24:25 as along with 77 people and 7 groups krapnik suizan sanchezbuelna Jporci artaban421 mtaschuk niallhaslam Zephyrus nicklynch mauriceccy pmendes jperkins timhubbard ipark-kaist jeremymiller vkwn MarcoAlvarez humburg mqbphcw3 kiekyon karinlag ocs marti robert85 allysonlister daforerog chasmand lawraga jorisslob bertelsen mshossain ajbattle paszkows coela fbristow kshameer anthropomorphism nolodie dagmar Robinder verdicchio raistrick vertikalist aalibes miguel dragonrez lfriedl chad_davis yas balajis indigoviolet benny dullhunk nirfriedman fisherp caporaso helliontroy zlu gurkanbebek djkt massivemayhem incovoma leechuck aconesa sgoetz javamint bootsy PunkRock natstreet naegele CitoJam pablomendes carlk marck dgront roys fongenae 8_01 BTS-PT-AS-CS kdl Bioinformatics EisenLab T_lab biomedical-nlp
	Genetic variation in mRNA coding sequences of highly conserved genes [My Copy] Physiol. Genomics, Vol. 5, No. 3. (2 April 2001), pp. 113-118. by Ten, Jeffrey Olsen, David Housman, Frank Baas, Vince Stanton posted to data-mining dna genetics hominidae humans nuclear primates protein proteins sequence-evolution variability by rvosa to the group FAB-lab on 2008-08-11 03:27:36 as
	Positive selection, relaxation, and acceleration in the evolution of the human and chimp genome. [My Copy] PLoS Comput Biol, Vol. 2, No. 4. (April 2006) by L. Arbiza, J. Dopazo, H. Dopazo posted to adaptation animals clock-like comparative data-mining divergence dna genetics genome hominidae humans mammals nuclear ontology phylogenomics primates protein proteins rates ratio-test selection sequence-evolution by rvosa to the group FAB-lab on 2008-08-11 03:11:43 as along with 5 people and 2 groups operon marcius jordibc hdopazo Garamonfok BioinfoCIPF SGU-CIPF
	Assembly rules for protein networks derived from phylogenetic-statistical analysis of whole genomes [My Copy] BMC Evolutionary Biology, Vol. 7, No. Suppl 1. (2007) by Mark Pagel, Andrew Meade, Daniel Scott posted to genome networks phylogenomics phylogeny protein statistics by rvosa to the group FAB-lab on 2008-08-09 09:25:02 as
	Evolutionary divergence and convergence in proteins [My Copy] In Evolving Genes and Proteins (1965), pp. 97-165. by E. Zuckercandl, L. Pauling edited by V. Bryson, H. J. Vogel posted to amino-acid bibtex-import clock-like divergence evolution protein rates by rvosa to the group FAB-lab on 2008-02-06 23:58:31 as along with 1 person balicea
	Phylogeny of rhesus monkeys (Macaca mulatta) as revealed by mitochondrial DNA restriction enzyme analysis [My Copy] International Journal of Primatology, Vol. 14 (1993), pp. 587-605. by Y. P. Zhang, L. M. Shi posted to animals bibtex-import mammals mitochondrial phylogeny primates protein restriction vertebrates by rvosa to the group FAB-lab on 2008-02-06 23:58:31 as
	Likelihood Ratio Tests for Detecting Positive Selection and Application to Primate Lysozyme Evolution [My Copy] Molecular Biology and Evolution, Vol. 15, No. 5. (1998), pp. 568-573. by Ziheng Yang posted to animals bibtex-import likelihood mammals primates protein ratio-test selection substitution-models vertebrates by rvosa to the group FAB-lab on 2008-02-06 23:58:30 as
	When are phylogenetic analyses misled by convergence? A case study in Texas cave salamanders [My Copy] Systematic Biology, Vol. 52, No. 4. (2003), pp. 501-514. by J. J. Wiens, P. T. Chippindale, D. M. Hillis posted to adaptation bibtex-import evolution mitochondrial morphology phylogeny protein selection by rvosa to the group FAB-lab on 2008-02-06 23:58:30 as
	Organization and evolution of multifunctional Ca2+/CaM-dependent protein kinase genes [My Copy] Gene, Vol. 322 (2003), pp. 17-31. by Robert M. Tombes, Omar M. Faison, J. M. Turbeville posted to amino-acid bibtex-import evolution likelihood protein sequence-evolution by rvosa to the group FAB-lab on 2008-02-06 23:58:28 as
	Natural antibodies against alliinase in human serum and polyclonal antibodies elicited in rabbit share the same immunogenic determinants [My Copy] Immunology Letters, Vol. 71 (2000), pp. 43-47. by B. Tchernychev, A. Rabinkov, T. Miron, M. Wilchek posted to animals bibtex-import protein rodents vertebrates by rvosa to the group FAB-lab on 2008-02-06 23:58:28 as
	Genetic diversity in the snub-nosed monkey (Rhinopithecus bieti) as estimated by protein electrophoresis [My Copy] Conservation Biology, Vol. 9 (1995), pp. 947-951. by B. Su, L. M. Shi posted to animals bibtex-import mammals population-genetics primates protein vertebrates by rvosa to the group FAB-lab on 2008-02-06 23:58:28 as
	Protein electrophoretic variability in Saimiri and the question of its species status [My Copy] American Journal of Primatology, Vol. 29 (1993), pp. 183-193. by B. T. F. Silva, M. I. C. Sampaio, H. Schneider, et al.M. P. C. Schneider, E. Montoya, F. Encarnacion, Callegari S. M. Jacques, F. M. Salzano posted to animals bibtex-import classification mammals primates protein taxonomy vertebrates by rvosa to the group FAB-lab on 2008-02-06 23:58:26 as
	Sequences and Evolution of Human and Squirrel Monkey Blue Opsin Genes [My Copy] Journal of Molecular Evolution, Vol. 44 (1997), pp. 378-382. by L. C. Shimmin, P. Mai, Wen H. Li posted to amino-acid animals bibtex-import mammals primates protein sequence-evolution source-trees vertebrates vision by rvosa to the group FAB-lab on 2008-02-06 23:58:26 as
	NJML+: An extension of the NJML method to handle protein sequence data and computer software implementation [My Copy] Molecular Biology and Evolution, Vol. 18, No. 11. (2001), pp. 1983-1992. by S. Ota, W. H. Li posted to algorithms amino-acid bibtex-import likelihood methods phenetics protein software by rvosa to the group FAB-lab on 2008-02-06 23:58:19 as
	Bayesian and maximum likelihood phylogenetic analyses of protein sequence data under relative branch-length differences and model violation [My Copy] BMC Evolutionary Biology, Vol. 5, No. 8. (2005) by Jessica C. Mar, Timothy J. Harlow, Mark A. Ragan posted to bayesian bibtex-import likelihood phylogeny protein substitution-models by rvosa to the group FAB-lab on 2008-02-06 23:58:16 as
	A Reassessment of Mammalian aA-Crystallin Sequences Using DNA Sequencing: Implications for Anthropoid Affinities of Tarsier [My Copy] Journal of Molecular Evolution, Vol. 41 (1995), pp. 901-908. by C. J. Jaworski posted to amino-acid animals bibtex-import dna mammals nuclear primates protein sequence source-trees vertebrates vision by rvosa to the group FAB-lab on 2008-02-06 23:58:14 as
	Identifying conflicting signal in a multigene analysis reveals a highly resolved tree: The phylogeny of Rodentia (Mammalia) [My Copy] Systematic Biology, Vol. 52, No. 5. (2003), pp. 604-617. by R. W. Debry posted to animals bayesian bibtex-import dna likelihood mammals markov-chains monte-carlo nuclear phylogeny phyloinformatics protein rodents vertebrates by rvosa to the group FAB-lab on 2008-02-06 23:58:06 as
	Congruence between morphometric and allozyme data for Menidia species: A reappraisal. [My Copy] Systematic Zoology, Vol. 29 (1980), pp. 288-299. by D. H. Colless posted to bibtex-import methods morphometrics protein topology by rvosa to the group FAB-lab on 2008-02-06 23:58:04 as
	Phylogenetic Relationships of the Callitrichinae (Platyrrhini, Primates) Based on b2-Microglobulin DNA Sequences [My Copy] American Journal of Primatology, Vol. 48 (1999), pp. 225-236. by Flavio C. Canavez, Miguel A. M. Moreira, Faical Simon, Peter Parham, Hector N. Seuanez posted to amino-acid animals bibtex-import dna mammals nuclear phylogeny primates protein source-trees vertebrates by rvosa to the group FAB-lab on 2008-02-06 23:58:04 as
	Protein microarrays guide tolerizing DNA vaccine treatment of autoimmune encephalomyelitis [My Copy] Nature Biotechnology, Vol. 21, No. 9. (10 August 2003), pp. 1033-1039. by William H. Robinson, Paulo Fontoura, Byung J. Lee, et al.Henry E. de Vegvar, Jennifer Tom, Rosetta Pedotti, Carla D. DiGennaro, Dennis J. Mitchell, Derek Fong, Peggy P. K. Ho, Pedro J. Ruiz, Emanual Maverakis, David B. Stevens, Claude C. A. Bernard, Roland Martin, Vijay K. Kuchroo, Johannes M. van Noort, Claude P. Genain, Sandra Amor, Tomas Olsson, Paul J. Utz, Hideki Garren, Lawrence Steinman posted to microarray protein by breden to the group FAB-lab on 2006-09-28 01:18:36 as along with 1 person and 1 group VGreiff SFUAntibodyResearch
	Protein arrays for autoantibody profiling and fine-specificity mapping. [My Copy] Proteomics, Vol. 3, No. 11. (November 2003), pp. 2077-2084. by W. H. Robinson, L. Steinman, P. J. Utz posted to microarray protein by breden to the group FAB-lab on 2006-09-28 01:16:55 as along with 1 group SFUAntibodyResearch
	High-throughput methods for measuring autoantibodies in systemic lupus erythematosus and other autoimmune diseases. [My Copy] Autoimmunity, Vol. 37, No. 4. (June 2004), pp. 269-272. by K. L. Graham, W. H. Robinson, L. Steinman, P. J. Utz posted to autoimmune microarray protein by breden to the group FAB-lab on 2006-09-28 01:13:34 as along with 1 group SFUAntibodyResearch
	A new two-color Fab labeling method for autoantigen protein microarrays [My Copy] Nature Methods, Vol. 3, No. 9. (23 August 2006), pp. 745-751. by Michael G. Kattah, Golnaz R. Alemi, Donna L. Thibault, Imelda Balboni, Paul J. Utz posted to microarray protein by breden to the group FAB-lab on 2006-09-28 01:01:41 as along with 1 group SFUAntibodyResearch
	Multiplexed protein array platforms for analysis of autoimmune diseases. [My Copy] Annu Rev Immunol, Vol. 24 (2006), pp. 391-418. by I. Balboni, S. M. Chan, M. Kattah, J. D. Tenenbaum, A. J. Butte, P. J. Utz posted to microarray protein by breden to the group FAB-lab on 2006-09-15 15:58:55 as along with 1 group SFUAntibodyResearch
	Protein arrays for studying blood cells and their secreted products [My Copy] Immunological Reviews, Vol. 204, No. 1. (April 2005), pp. 264-282. by J. Utz posted to ab microarray protein by breden to the group FAB-lab on 2006-09-14 07:52:22 as along with 1 group SFUAntibodyResearch
	Antigen microarray profiling of autoantibodies in rheumatoid arthritis [My Copy] Arthritis & Rheumatism, Vol. 52, No. 9. (September 2005), pp. 2645-2655. by Wolfgang Hueber, Brian A. Kidd, Beren H. Tomooka, et al.Byung J. Lee, Bonnie Bruce, James F. Fries, Grete Sønderstrup, Paul Monach, Jan W. Drijfhout, Walther J. van Venrooij, Paul J. Utz, Mark C. Genovese, William H. Robinson posted to ab microarray protein by breden to the group FAB-lab on 2006-09-14 07:51:10 as along with 1 person and 1 group VGreiff SFUAntibodyResearch

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structure	1109
interaction	516
evolution	470
folding	417
prediction	412
membrane	304
network	278
review	274
bioinformatics	264
function	251
sequence	218
database	196
alignment	189
binding	181
docking	156
dynamics	150
domain	143
rna	134
nmr	126
expression	125
design	118
gene	118
yeast	117
dna	115
interactions	111
networks	111
modeling	98
ligand	92
enzyme	89
classification	88
simulation	88
modelling	86
fold	81
electrostatics	79
proteomics	76
drug	71
stability	71
biology	67
molecular	67
complex	66
methods	66
mutation	66
algorithms	65
amaranthus	63
genome	63
ppi	63
model	60
mrna	60
md	59
tlb	59
algorithm	57
experiment	57
kinase	57
major-proposal	56
analysis	55
cell	53
motif	53
lipid	51
protein-protein	51
structural-biology	51
annotation	50
genomics	49
method	48
enzymatic_hydrolysis	46
transcription	46
ribosome	45
aggregation	44
comps	44
cell-free	43
homology	43
translation	43
interface	42
clustering	41
microarray	41
whey	41
proteins	40
software	40
surface	40
energy	39
conformation	38
potential	38
recognition	38
site	38
bacteria	37
localization	37
pdb	37
peptide	36
selection	36
disease	35
nlp	35
aravind	34
computational	34
correlation	34
fluorescence	34
scp	34
virus	34
bio	33
electrostatic	33
human	33
phylogeny	33

Group: FAB-lab - with tag protein [36 articles] Export

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