Group: FAB-lab - with tag selection [129 articles] Export

Recent papers posted by members of the FAB-lab group with tag selection

	Phylogenomics of primates and their ancestral populations [My Copy] Genome Research, Vol. 19, No. 11. (3 November 2009), pp. 1929-1941. by Adam Siepel posted to variability speciation sequence selection recombination primates phylogenomics genome evolution divergence databases data-mining by rvosa to the group FAB-lab on 2009-11-25 17:32:53 as along with 3 people djkt aprasad merpublic
	Signatures of natural selection are not uniform across genes of innate immune system, but purifying selection is the dominant signature [My Copy] Proceedings of the National Academy of Sciences (9 April 2009) by Souvik Mukherjee, Neeta Sarkar-Roy, Diane K. Wagener, Partha P. Majumder posted to evolution genetics hominidae humans protein rates selection by rvosa to the group FAB-lab on 2009-04-25 01:56:58 as along with 1 person jasontsai
	The universal distribution of evolutionary rates of genes and distinct characteristics of eukaryotic genes of different apparent ages [My Copy] Proceedings of the National Academy of Sciences (7 April 2009) by Yuri I. Wolf, Pavel S. Novichkov, Georgy P. Karev, Eugene V. Koonin, David J. Lipman posted to adaptation amino-acid divergence estimation genetics genome methods models protein rates selection sequence-evolution statistics by rvosa to the group FAB-lab on 2009-04-24 09:19:23 as along with 4 people RamuAnandakrishnan deanmalmgren jjray gjuggler
	Reliabilities of identifying positive selection by the branch-site and the site-prediction methods [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 16. (21 April 2009), pp. 6700-6705. by Masafumi Nozawa, Yoshiyuki Suzuki, Masatoshi Nei posted to adaptation amino-acid likelihood methods protein selection substitution-models vertebrates by rvosa to the group FAB-lab on 2009-04-24 09:15:52 as along with 8 people ckenaley sameersoi djkt ramiro2k gjuggler bpcusack atphan gulsacan
	Quantification of Adaptive Evolution of Genes Expressed in Avian Brain and the Population Size Effect on the Efficacy of Selection [My Copy] Mol Biol Evol, Vol. 26, No. 5. (1 May 2009), pp. 1073-1079. by Erik Axelsson, Hans Ellegren posted to amino-acid birds divergence encephalization evolution humans population-genetics protein selection by rvosa to the group FAB-lab on 2009-04-24 09:10:33 as along with 1 person gjuggler
	More genes underwent positive selection in chimpanzee evolution than in human evolution. [My Copy] Proc Natl Acad Sci U S A, Vol. 104, No. 18. (1 May 2007), pp. 7489-7494. by M. A. Bakewell, P. Shi, J. Zhang posted to animals genome hominidae humans primates selection by rvosa to the group FAB-lab on 2008-08-30 00:24:04 as along with 5 people gjuggler bpb usagi-kirin pradiptaray Garamonfok
	Datamonkey: rapid detection of selective pressure on individual sites of codon alignments [My Copy] Bioinformatics, Vol. 21, No. 10. (15 May 2005), pp. 2531-2533. by Sergei L. K. Pond, Simon D. Frost posted to data-mining selection sequence-evolution software substitution-models by rvosa to the group FAB-lab on 2008-08-14 00:43:38 as along with 2 people druvus BioNica
	Detecting lineage-specific adaptive evolution of brain-expressed genes in human using rhesus macaque as outgroup [My Copy] Genomics, Vol. 88, No. 6. (December 2006), pp. 745-751. by Xiao-Jing Yu, Hong-Kun Zheng, Jun Wang, Wen Wang, Bing Su posted to adaptation alignment amino-acid animals anthropology clock-like comparative data-mining divergence dna encephalization evolution genetics genome hominidae humans mammals models phylogenomics primates protein proteins proteomics rates ratio-test selection sequence-evolution by rvosa to the group FAB-lab on 2008-08-12 08:00:48 as along with 1 person kndiaye
	Frequent False Detection of Positive Selection by the Likelihood Method with Branch-Site Models [My Copy] Mol Biol Evol, Vol. 21, No. 7. (1 July 2004), pp. 1332-1339. by Jianzhi Zhang posted to genetics likelihood methods selection sequence-evolution substitution-models by rvosa to the group FAB-lab on 2008-08-12 04:02:24 as along with 1 person Garamonfok
	Positive selection, relaxation, and acceleration in the evolution of the human and chimp genome. [My Copy] PLoS Comput Biol, Vol. 2, No. 4. (April 2006) by L. Arbiza, J. Dopazo, H. Dopazo posted to adaptation animals clock-like comparative data-mining divergence dna genetics genome hominidae humans mammals nuclear ontology phylogenomics primates protein proteins rates ratio-test selection sequence-evolution by rvosa to the group FAB-lab on 2008-08-11 03:11:43 as along with 5 people and 2 groups operon marcius jordibc hdopazo Garamonfok BioinfoCIPF SGU-CIPF
	Molecular evolution of FOXP2, a gene involved in speech and language. [My Copy] Nature, Vol. 418, No. 6900. (22 August 2002), pp. 869-872. by Wolfgang Enard, Molly Przeworski, Simon E. Fisher, et al.Cecilia S. Lai, Victor Wiebe, Takashi Kitano, Anthony P. Monaco, Svante Pääbo posted to animals genetics hominidae humans mammals primates rates rodents selection sequence sequence-evolution by rvosa to the group FAB-lab on 2008-08-10 09:57:48 as along with 5 people jeremymiller cacalaudi islasli niallhaslam djkt
	Is the population size of a species relevant to its evolution? [My Copy] Evolution Int J Org Evolution, Vol. 55, No. 11. (11 November 2001), pp. 2161-2169. by J. H. Gillespie posted to population-genetics rates selection substitution-models by rvosa to the group FAB-lab on 2008-08-09 21:56:15 as along with 4 people haloin aprasad jmeppley bpcusack
	Likelihood Ratio Tests for Detecting Positive Selection and Application to Primate Lysozyme Evolution [My Copy] Molecular Biology and Evolution, Vol. 15, No. 5. (1998), pp. 568-573. by Ziheng Yang posted to animals bibtex-import likelihood mammals primates protein ratio-test selection substitution-models vertebrates by rvosa to the group FAB-lab on 2008-02-06 23:58:30 as
	Molecular Evolution of Cytochrome c Oxidase Subunit IV: Evidence for Positive Selection in Simian Primates [My Copy] Journal of Molecular Evolution, Vol. 44 (1997), pp. 477-491. by Wei Wu, M. Goodman, Margaret I. Lomax, Lawrence I. Grossman posted to animals bibtex-import dna mammals mitochondrial primates rates selection source-trees substitution-models vertebrates by rvosa to the group FAB-lab on 2008-02-06 23:58:30 as
	When are phylogenetic analyses misled by convergence? A case study in Texas cave salamanders [My Copy] Systematic Biology, Vol. 52, No. 4. (2003), pp. 501-514. by J. J. Wiens, P. T. Chippindale, D. M. Hillis posted to adaptation bibtex-import evolution mitochondrial morphology phylogeny protein selection by rvosa to the group FAB-lab on 2008-02-06 23:58:30 as
	Environment dependent selection in hybridizing Mytilus populations: implications for heterozygote deficiency and ecological speciation [My Copy] FAB's letters, Vol. 1, No. 1. (2002), pp. 1-6. by S. A. Springer, D. D. Heath posted to animals bibtex-import ecology hybridization invertebrates morphology selection speciation by rvosa to the group FAB-lab on 2008-02-06 23:58:27 as
	Density cycles and an offspring quantity and quality game driven by natural selection [My Copy] Nature, Vol. 406 (2000), pp. 985-988. by Barry Sinervo, Erik Svensson, Tosha Comendant posted to bibtex-import population selection by rvosa to the group FAB-lab on 2008-02-06 23:58:27 as
	History influences signal recognition: neural network models of tungara frogs [My Copy] Proceedings of the Royal Society London Series B, Vol. 267 (2000), pp. 1633-1639. by S. M. Phelps, M. J. Ryan posted to animals behaviour bibtex-import methods phylogeny selection sexual vertebrates by rvosa to the group FAB-lab on 2008-02-06 23:58:21 as
	The effects of selection and bottlenecks on male mating success in peripheral isolates [My Copy] American Naturalist, Vol. 153, No. 4. (1999), pp. 437-444. by Arne O. Mooers, Howard D. Rundle, M. C. Whitlock posted to bibtex-import selection sexual by rvosa to the group FAB-lab on 2008-02-06 23:58:18 as
	Phylogenetic analyses of primate size evolution: the consequences of sexual selection [My Copy] Biological Journal of the Linnean Society, Vol. 64, No. 4. (1998), pp. 413-447. by P. Lindenfors, B. S. Tullberg posted to animals bibtex-import mammals morphology phylogeny primates selection sexual vertebrates by rvosa to the group FAB-lab on 2008-02-06 23:58:16 as
	Evolution of Rh Blood Group Genes Have Experienced Gene Conversions and Positive Selection [My Copy] Journal of Molecular Evolution, Vol. 49 (1999), pp. 615-626. by T. Kitano, N. Saitou posted to animals bibtex-import mammals primates selection sequence-evolution source-trees vertebrates by rvosa to the group FAB-lab on 2008-02-06 23:58:15 as
	Molecular evolution of the maize sex-determining gene TASSELSEED2 in Bouteloua (Poaceae) [My Copy] Molecular Phylogenetics and Evolution, Vol. 29, No. 3. (2003), pp. 519-528. by M. S. Kinney, J. T. Columbus, E. A. Friar posted to bibtex-import divergence genetics plants selection sexual by rvosa to the group FAB-lab on 2008-02-06 23:58:15 as
	Stabilizing selection and the comparative analysis of adaptation [My Copy] Evolution, Vol. 51 (1997), pp. 1341-1351. by T. F. Hansen posted to adaptation bibtex-import comparative selection by rvosa to the group FAB-lab on 2008-02-06 23:58:11 as
	Evolution and Selection of Primate T Cell Antigen Receptor BV8 Gene Subfamily [My Copy] Molecular Phylogenetics and Evolution, Vol. 8, No. 1. (1997), pp. 51-64. by W. Funkhouser, B. F. Koop, P. Charmley, D. Martindale, J. L. Slightom, L. Hood posted to animals bibtex-import evolution mammals primates selection sequence-evolution source-trees vertebrates by rvosa to the group FAB-lab on 2008-02-06 23:58:08 as
	Broad-sense sexual selection, sex gene pool evolution, and speciation [My Copy] Genome, Vol. 42 (1999), pp. 1033-1041. by A. Civetta, R. S. Singh posted to bibtex-import evolution selection sexual speciation by rvosa to the group FAB-lab on 2008-02-06 23:58:04 as
	Molecular Evolution of Two Linked Genes, Est-6 and Sod, in Drosophila melanogaster [My Copy] Genetics, Vol. 153 (1999), pp. 1357-1369. by E. S. Balakirev, E. I. Balakirev, Rodriguez F. Trelles, F. J. Ayala posted to amino-acid animals bibtex-import insects invertebrates polymorphism selection sequence-evolution by rvosa to the group FAB-lab on 2008-02-06 23:58:02 as
	Transgenerational induction of defences in animals and plants [My Copy] Nature, Vol. 401 (1999), pp. 60-63. by Anurag A. Agrawal, Christian Laforsch, Ralph Tollrian posted to animals behaviour bibtex-import evolution morphology plants selection by rvosa to the group FAB-lab on 2008-02-06 23:58:01 as
	Multiple Hypothesis Testing to Detect Lineages Under Positive Selection that Affects Only a Few Sites. [My Copy] Mol Biol Evol (5 March 2007) by Maria Anisimova, Ziheng Yang posted to selection model ml by stevanspringer to the group FAB-lab on 2007-05-09 06:22:12 as along with 3 people and 1 group operon dpollard gjuggler EisenLab
	Statistical methods for detecting molecular adaptation. [My Copy] TRENDS IN ECOLOGY AND EVOLUTION, Vol. 15, No. 12. (1 December 2000), pp. 496-503. by Z. Yang, J. P. Bielawski posted to statistic selection review ml by stevanspringer to the group FAB-lab on 2007-05-03 18:34:39 as along with 3 people and 2 groups gjuggler hdopazo clearbluespring Bioinformatics BioinfoCIPF
	Adaptive Gamete-Recognition Divergence in a Hybridizing Mytilus Population [My Copy] Evolution, Vol. 61, No. 4. (2007), pp. 772-783. by Stevan A. Springer, Bernard J. Crespi posted to selection hybridization gamete_recognition fertilization adaptation -mytilus by stevanspringer to the group FAB-lab on 2007-04-09 17:12:03 as along with 1 person chrys
	The Role of Population Size in Molecular Evolution [My Copy] Theoretical Population Biology, Vol. 55, No. 2. (April 1999), pp. 145-156. by John H. Gillespie posted to selection population_genetics neutral model by stevanspringer to the group FAB-lab on 2007-04-04 19:32:54 as
	The Influence of Phylogenetic Uncertainty on the Detection of Positive Darwinian Selection [My Copy] Molecular Biology and Evolution, Vol. 23, No. 12. (15 December 2006), pp. 2274-2278. by Pie, R. Marcio posted to selection phylogeny ml by stevanspringer to the group FAB-lab on 2007-04-03 20:55:43 as
	The relationship between the pleiotropic phenotypic effects of a mutation fixed by selection [My Copy] Heredity, Vol. aop, No. current. by C. K. Griswold, posted to selection pleiotropy mutation model adaptation by stevanspringer to the group FAB-lab on 2007-04-03 20:42:04 as
	Natural Selection for Variances in Offspring Numbers: A New Evolutionary Principle [My Copy] The American Naturalist, Vol. 111, No. 981. (1977), pp. 1010-1014. by John H. Gillespie posted to fitness model selection by stevanspringer to the group FAB-lab on 2007-03-15 18:59:30 as
	Statistical Tests for Detecting Positive Selection by Utilizing High-Frequency Variants [My Copy] Genetics, Vol. 174, No. 3. (1 November 2006), pp. 1431-1439. by Kai Zeng, Yun-Xin Fu, Suhua Shi, Chung-I Wu posted to polymorphism selection statistic by stevanspringer to the group FAB-lab on 2006-11-24 21:15:38 as along with 4 people and 1 group renewang operon ramensky dmc Durbin group
	Understanding quantitative genetic variation. [My Copy] Nat Rev Genet, Vol. 3, No. 1. (January 2002), pp. 11-21. by N. H. Barton, P. D. Keightley posted to selection review quantitative_genetics qtl phenotype mutation adaptation by stevanspringer to the group FAB-lab on 2006-09-25 07:33:16 as along with 2 people and 1 group ryang dpollard RockmanLab
	Directional sexual selection on chroma and within-pattern colour contrast in Labeotropheus fuelleborni. [My Copy] Proc Biol Sci, Vol. 271 Suppl 6 (7 December 2004) by M. J. Pauers, J. S. McKinnon, T. J. Ehlinger posted to cichlid coloration male selection by breden to the group FAB-lab on 2006-07-31 21:47:34 as along with 1 group SFUAntibodyResearch
	Conservation of cytotoxic T lymphocyte (CTL) epitopes as a host strategy to constrain parasite adaptation: evidence from the nef gene of human immunodeficiency virus 1 (HIV-1). [My Copy] Mol Biol Evol, Vol. 15, No. 10. (October 1998), pp. 1259-1268. by J. da Silva, A. L. Hughes posted to ctl hiv selection by breden to the group FAB-lab on 2006-06-01 06:29:03 as along with 1 group SFUAntibodyResearch
	Virus-specific cytotoxic T-lymphocyte responses select for amino-acid variation in simian immunodeficiency virus Env and Nef. [My Copy] Nat Med, Vol. 5, No. 11. (November 1999), pp. 1270-1276. by D. T. Evans, D. H. O'Connor, P. Jing, et al.J. L. Dzuris, J. Sidney, J. da Silva, T. M. Allen, H. Horton, J. E. Venham, R. A. Rudersdorf, T. Vogel, C. D. Pauza, R. E. Bontrop, R. DeMars, A. Sette, A. L. Hughes, D. I. Watkins posted to acid amino hiv selection by breden to the group FAB-lab on 2006-06-01 06:27:13 as along with 1 group SFUAntibodyResearch
	Molecular phylogenetic evidence of cytotoxic T lymphocyte (CTL) selection on human immunodeficiency virus type 1 (HIV-1) [My Copy] Mol Biol Evol, Vol. 16, No. 10. (October 1999), pp. 1420-1422. by J. da Silva, A. L. Hughes posted to ctl hiv selection by breden to the group FAB-lab on 2006-06-01 06:26:27 as along with 1 group SFUAntibodyResearch
	Simultaneous positive and purifying selection on overlapping reading frames of the tat and vpr genes of simian immunodeficiency virus. [My Copy] J Virol, Vol. 75, No. 17. (September 2001), pp. 7966-7972. by A. L. Hughes, K. Westover, J. da Silva, D. H. O'Connor, D. I. Watkins posted to hiv selection by breden to the group FAB-lab on 2006-06-01 06:12:17 as along with 1 group SFUAntibodyResearch
	Extraordinary divergence and positive Darwinian selection in a fusagenic protein coating the acrosomal process of abalone spermatozoa. [My Copy] Proc Natl Acad Sci U S A, Vol. 92, No. 11. (23 May 1995), pp. 4957-4961. by W. J. Swanson, V. D. Vacquier posted to -abalone acrosome gamete_recognition selection by stevanspringer to the group FAB-lab on 2006-05-19 01:25:29 as along with 1 person skumagai
	Being positive about selection. [My Copy] PLoS Biol, Vol. 4, No. 3. (March 2006) by C. MacCallum, E. Hill posted to selection summary by stevanspringer to the group FAB-lab on 2006-05-17 23:19:10 as along with 5 people operon balajis ejeffery BioNica JBEgwa01
	Accelerated evolution of nervous system genes in the origin of Homo sapiens. [My Copy] Cell, Vol. 119, No. 7. (29 December 2004), pp. 1027-1040. by S. Dorus, E. J. Vallender, P. D. Evans, et al.J. R. Anderson, S. L. Gilbert, M. Mahowald, G. J. Wyckoff, C. M. Malcom, B. T. Lahn posted to encephelization primates reconstruction selection by rvosa to the group FAB-lab on 2006-04-05 09:16:50 as along with 5 people ejeffery cmm djkt shoshin chrys
	Molecular insights into human brain evolution. [My Copy] PLoS Biol, Vol. 3, No. 3. (March 2005) by J. Bradbury posted to comparative encephelization selection by rvosa to the group FAB-lab on 2006-04-05 09:05:11 as
	Sex-related genes, directional sexual selection, and speciation. [My Copy] Mol Biol Evol, Vol. 15, No. 7. (July 1998), pp. 901-909. by A. Civetta, R. S. Singh posted to selection sexual_selection speciation by stevanspringer to the group FAB-lab on 2006-03-25 20:12:09 as along with 2 people and 1 group thegoose2 tharris C. elegans / WormBase
	Large-scale search for genes on which positive selection may operate. [My Copy] Mol Biol Evol, Vol. 13, No. 5. (May 1996), pp. 685-690. by T. Endo, K. Ikeo, T. Gojobori posted to genome selection by stevanspringer to the group FAB-lab on 2006-03-25 20:09:27 as
	The Consequences of Direct versus Indirect Species Interactions to Selection on Traits: Pollination and Nectar Robbing in Ipomopsis aggregata [My Copy] The American Naturalist, Vol. 167 (2006), pp. 315-328. by R. E. Irwin posted to evolution-floral nectar-robber pdfi selection by cmm to the group FAB-lab on 2006-03-24 03:47:53 as
	Nonsynonymous substitution in abalone sperm fertilization genes exceeds substitution in introns and mitochondrial DNA. [My Copy] Proc Natl Acad Sci U S A, Vol. 95, No. 18. (1 September 1998), pp. 10676-10681. by E. C. Metz, R. Robles-Sikisaka, V. D. Vacquier posted to -abalone gamete_recognition selection by stevanspringer to the group FAB-lab on 2006-03-10 23:50:36 as
	Evolutionary EST analysis identifies rapidly evolving male reproductive proteins in Drosophila. [My Copy] Proc Natl Acad Sci U S A, Vol. 98, No. 13. (19 June 2001), pp. 7375-7379. by W. J. Swanson, A. G. Clark, H. M. Waldrip-Dail, M. F. Wolfner, C. F. Aquadro posted to -drosophila est reproduction selection by stevanspringer to the group FAB-lab on 2006-03-10 20:42:21 as

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evolution	617
mutation	239
phylogenetics	227
feature	150
model	133
positive	104
human	97
adaptation	90
genomics	73
genome	69
drosophila	66
genetics	64
review	58
popgen	56
read	54
natural	52
admissions	51
strugglers	48
classification	46
cots	42
gene	42
expression	36
snp	36
ml	35
protein	35
recombination	35
off-the-shelf	34
qos	34
sexual	34
domestication	33
hiv	33
variable	32
proteins	31
software	31
resource	30
comparative	29
web-services	28
bioinformatics	27
population_genetics	27
database	26
primates	26
algorithm	24
evaluation	24
methods	24
polymorphism	24
population	24
ranking	24
analysis	23
collection	22
foxes	21
microarray	21
selex	21
variation	21
residency	20
scutwork	20
theory	20
w	20
bayesian	19
bias	19
cancer	19
data	19
duplication	19
learning	19
linkage	19
method	19
models	19
statistics	19
genome_evolution	18
phylogeny	18
vesicular	18
diversity	17
mammals	17
metaheuristic	17
molecular_evolution	17
neutral	17
sample	17
bacteria	16
dna	16
molevoltestis	16
network	16
quality	16
speciation	16
statistic	16
drift	15
evolutionary-computation	15
humans	15
paml	15
population-genetics	15
sequence-evolution	15
constraint	14
criteria	14
demography	14
doctorate	14
information	14
p2p	14
positive_selection	14
reproduction	14
simulation	14
summary	14
selection_test	13

Group: FAB-lab - with tag selection [129 articles] Export

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