Group: Journal picks

Articles of interest to those working on the Hinxton campus

Recent group activity

2009-12-22

11:23: fsm posted Molecular interactions and data standardisation
11:23: fsm posted Using the PRIDE Proteomics Identifications Database for Knowledge Discovery and Data Analysis
11:23: fsm posted The Sanger FASTQ file format for sequences with quality scores, and the Solexa/Illumina FASTQ variants
10:48: dullhunk posted MapReduce and parallel DBMSs: friends or foes?
10:47: dullhunk posted MapReduce: a flexible data processing tool

2009-12-21

11:56: fsm posted Bacterial Pleckstrin Homology Domains: A Prokaryotic Origin for the PH Domain
11:56: fsm posted Construction of gene-targeting vectors by recombineering
11:56: fsm posted European Lactase Persistence Genotype Shows Evidence of Association With Increase in Body Mass Index
11:56: fsm posted A High-Throughput Pharmaceutical Screen Identifies Compounds with Specific Toxicity against BRCA2-Deficient Tumors
11:56: fsm posted Scoring and Validation of Tandem MS Peptide Identification Methods
11:56: fsm posted Genomic and phenotypic variation in epidemic-spanning Salmonella enterica serovar Enteritidis isolates
10:22: jherrero68 posted Effect of read-mapping biases on detecting allele-specific expression from RNA-sequencing data
10:18: jherrero68 posted Tandem repeats modify the structure of human genes hosted in segmental duplications
10:02: jherrero68 joined the group
09:33: ppgardne invited jherrero68 to join the group

2009-12-19

16:42: ppgardne posted Ecological Genomics Gets Down to Genes--and Function
16:33: ppgardne posted The Evolutionary History of Protein Domains Viewed by Species Phylogeny

2009-12-18

15:46: dullhunk posted Bioinformatics: SNPs while you wait
13:02: ppgardne posted Long nuclear-retained non-coding RNAs and allele-specific higher-order chromatin organization at imprinted snoRNA gene arrays

2009-12-17

13:25: fsm posted Deep short-read sequencing of chromosome 17 from the mouse strains A/J and CAST/Ei identifies significant germline variation and candidate genes that regulate liver triglyceride levels
13:25: fsm posted Floxin, a resource for genetically engineering mouse ESCs
13:25: fsm posted A small-cell lung cancer genome with complex signatures of tobacco exposure
13:25: fsm posted A comprehensive catalogue of somatic mutations from a human cancer genome
13:25: fsm posted Developmentally Regulated Impediments to Skin Reinnervation by Injured Peripheral Sensory Axon Terminals
13:25: fsm posted Salmonella enterica serovar Typhimurium mutants completely lacking the F0F1 ATPase are novel live attenuated vaccine strains
13:25: fsm posted Parental origin of sequence variants associated with complex diseases
13:25: fsm posted The Evolution of Amastin Surface Glycoproteins in Trypanosomatid Parasites
13:25: fsm posted Profile: David Harper
11:58: dullhunk posted Credit where credit is due: The Open Researcher and Contributor ID (ORCID)
11:09: pareng posted DNA nanomechanics allows direct digital detection of complementary DNA and microRNA targets.

2009-12-16

22:32: ppgardne posted RNAsnoop: Efficient Target Prediction for H/ACA snoRNAs
16:56: ppgardne posted Transcribed-ultra conserved region expression is associated with outcome in high-risk neuroblastoma
14:01: ppgardne posted Molecular biology. Rejoice--RNAi for yeast.
12:42: pareng posted Sex-specific and lineage-specific alternative splicing in primates
10:41: AlexBateman posted BLAST+: architecture and applications
00:15: dullhunk posted Userscripts for the life sciences.
00:13: dullhunk posted QuickGO: a web-based tool for Gene Ontology searching.

2009-12-15

2009-12-14

17:21: dullhunk posted Graphle: Interactive exploration of large, dense graphs
16:28: dullhunk posted How To Choose a Good Scientific Problem
16:19: dullhunk posted How to write consistently boring scientific literature
15:17: dullhunk posted ChemAxiom – An Ontological Framework for Chemistry in Science
11:07: dullhunk posted The Carvedilol Hibernation Reversible Ischaemia Trial, Marker of Success (CHRISTMAS) study Methodology of a randomised, placebo controlled, multicentre study of carvedilol in hibernation and heart failure
11:06: dullhunk posted Red Crabs in Rain Forest, Christmas Island: Biotic Resistance to Invasion by an Exotic Snail
11:04: dullhunk posted The Vela glitch of Christmas 1988
11:03: dullhunk posted Looking at christmas trees in the nucleolus
11:03: dullhunk posted More Than a Labor of Love: Gender Roles and Christmas Gift Shopping
11:02: dullhunk posted Christmas Disease
10:10: dullhunk posted Annotation Error in Public Databases: Misannotation of Molecular Function in Enzyme Superfamilies
10:09: dullhunk posted ENFIN – A European network for integrative systems biology

2009-12-12

21:28: ppgardne posted [Wholesome Christmas fish]
21:27: ppgardne posted [Catching the Christmas fish]
21:27: ppgardne posted [The fat canard of Christmas]
21:27: ppgardne posted Christmas in the Cotswolds: a personal view of red snapper poisoning.
21:26: ppgardne posted A venomous Christmas tour.
21:23: ppgardne posted Spread of Heterobasidion annosum in Christmas Tree Plantations of the United States Pacific Northwest.
21:22: ppgardne posted Historical mammal extinction on Christmas Island (Indian Ocean) correlates with introduced infectious disease.
21:21: ppgardne posted What every urologist should get for Christmas, some DNA.
21:20: ppgardne posted Cytochrome P-450 4F18 is the leukotriene B4 omega-1/omega-2 hydroxylase in mouse polymorphonuclear leukocytes: identification as the functional orthologue of human polymorphonuclear leukocyte CYP4F3A in the down-regulation of responses to LTB4.
21:17: ppgardne posted Transfusion malaria in a man with Christmas disease.
21:17: ppgardne posted Malaria at Christmas: risks of prophylaxis versus risks of malaria.
21:16: ppgardne posted Out of the Christmas box.
21:15: ppgardne posted SIRT1 regulates the ribosomal DNA locus: epigenetic candles twinkle longevity in the Christmas tree.
21:13: ppgardne posted A case of selective impairment of encyclopaedic numerical knowledge or 'when December 25th is no longer Christmas day, but '20+5' is still 25'.
15:15: ppgardne posted Cardiac Mortality Is Higher Around Christmas and New Year's Than at Any Other Time: The Holidays as a Risk Factor for Death
15:11: ppgardne posted Looking at Christmas trees in the nucleolus.

2009-12-11

10:49: fsm posted Microarray-based cytogenetic profiling reveals recurrent and subtype-associated genomic copy number aberrations in feline sarcomas
10:49: fsm posted Multiple genetic mechanisms lead to the loss of functional TbAT1 expression in drug resistant trypanosomes
10:49: fsm posted Archiving next generation sequencing data
10:49: fsm posted The key role of genomics in modern vaccine and drug design for emerging infectious diseases
10:49: fsm posted Recurated protein interaction datasets
10:49: fsm posted Ethical data release in genome-wide association studies in developing countries
10:49: fsm posted Clonally transmissible cancers in dogs and Tasmanian devils
10:49: fsm posted Donor-recipient mismatch for common gene deletion polymorphisms in graft-versus-host disease
10:49: fsm posted Molecular Analysis of Tumor-Promoting CD8+ T Cells in Two-Stage Cutaneous Chemical Carcinogenesis
10:49: fsm posted Exploitation of ontological resources for scientific literature analysis: Searching genes and related diseases
10:49: fsm posted Genomic and epigenetic evidence for oxytocin receptor deficiency in autism
10:49: fsm posted A General Basis for Cognition in the Evolution of Synapse Signaling Complexes
10:49: fsm posted The 2010 Nucleic Acids Research Database Issue and online Database Collection: a community of data resources
10:49: fsm posted Genomic DNA k-mer spectra: models and modalities
10:49: fsm posted MRMaid-DB: A Repository of Published SRM Transitions
10:49: fsm posted Large, rare chromosomal deletions associated with severe early-onset obesity
10:49: fsm posted A novel system of polymorphic and diverse NK cell receptors in primates
09:57: qayub posted Remarkably Little Variation in Proteins Encoded by the Y Chromosome's Single-Copy Genes, Implying Effective Purifying Selection
09:57: qayub posted Meta-Analysis of Genome-wide Association Studies with Overlapping Subjects
09:56: qayub posted Simultaneous Genotype Calling and Haplotype Phasing Improves Genotype Accuracy and Reduces False-Positive Associations for Genome-wide Association Studies
09:56: qayub posted A Cytogenetic Abnormality and Rare Coding Variants Identify ABCA13 as a Candidate Gene in Schizophrenia, Bipolar Disorder, and Depression
09:55: qayub posted Using Lifetime Risk Estimates in Personal Genomic Profiles: Estimation of Uncertainty
09:54: qayub posted Genetic Structure of the Han Chinese Population Revealed by Genome-wide SNP Variation
09:54: qayub posted Genomic Dissection of Population Substructure of Han Chinese and Its Implication in Association Studies

2009-12-10

17:17: ppgardne posted Deep sequencing analysis of the Methanosarcina mazei Go1 transcriptome in response to nitrogen availability.
17:16: ppgardne posted Replacing education with psychometrics: how learning about IQ almost-completely changed my mind about education.
15:37: AlexBateman posted The Protein Naming Utility: a rules database for protein nomenclature
15:36: AlexBateman posted The rate of mutation of a single gene
14:38: sbmontgomery posted Geographical genomics of human leukocyte gene expression variation in southern Morocco
10:32: dullhunk posted The Fourth Paradigm: Data-Intensive Scientific Discovery
10:12: dullhunk posted A guide to the day of big data
10:00: dullhunk posted Reflect: augmented browsing for the life scientist

2009-12-09

20:35: dullhunk posted Adventures in Semantic Publishing: Exemplar Semantic Enhancements of a Research Article
16:33: dullhunk posted Searching for SNPs with cloud computing
12:16: dullhunk posted Basic considerations for improving interoperability between ontology-based biological information systems
11:04: dullhunk posted What can metabolomics learn from genomics and proteomics?
10:54: dullhunk posted Pathway projector: web-based zoomable pathway browser using KEGG atlas and Google Maps API.

2009-12-08

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