Mitsuteru Nakao's Top Recommendations

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	Prediction of complete gene structures in human genomic DNA [My Copy] Journal of Molecular Biology, Vol. 268, No. 1. (25 April 1997), pp. 78-94. by C. Burge posted by 16 people viren4388 rshe jmartin49 Ayest pcahan1 indigoviolet kaspermunch dullhunk dquest wenhan GustavoLacerda nicholso Bioinformatics EisenLab nklee bandrewfox
	Frequent alternative splicing of human genes. [My Copy] Genome Res, Vol. 9, No. 12. (December 1999), pp. 1288-1293. by A. A. Mironov, J. W. Fickett, M. S. Gelfand posted by 3 people setar kaspermunch Bioinformatics
	Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. [My Copy] Nucleic acids research, Vol. 25, No. 17. (1 September 1997), pp. 3389-3402. by S. F. Altschul, T. L. Madden, A. A. Schäffer, et al.J. Zhang, Z. Zhang, W. Miller, D. J. Lipman posted by 74 people rshe niallhaslam ucbcjbm timhubbard parnell tfuji maria_hauser jbhiatt yylin mgomes BioNica idoerg pjcite swp09 kgutwin mcbla cpwardell References for 3DSim paper johanviklund daforerog nlapalu sebk tjimenez shung pwais dakelley knaseanka setar iakes miguel kaarsinogen bjorns bicko jmeppley chad_davis balajis nuke2005 eweaver david_parsons indigoviolet dullhunk robert dgront happy_manatee caporaso treangen kengg manzanita CitoJam jdelcampo aengisch rabio massivemayhem mirzazadeh azazello sujaikumar beatrizfernandez GustavoLacerda siebertm adijr viktor21614 EisenLab biomedical-nlp Microbial-Ecology Plantandetc mijam grottenolm bandrewfox edvin newton1234 mariakmejia granujilla marti CharlesM
	Genomic evidence for a complete sexual cycle in Candida albicans. [My Copy] Proc Natl Acad Sci U S A, Vol. 98, No. 6. (13 March 2001), pp. 3249-3253. by K. W. Tzung, R. M. Williams, S. Scherer, et al.N. Federspiel, T. Jones, N. Hansen, V. Bivolarevic, L. Huizar, C. Komp, R. Surzycki, R. Tamse, R. W. Davis, N. Agabian posted by 1 person radek
	Genomics of the fungal kingdom: insights into eukaryotic biology. [My Copy] Genome Res, Vol. 15, No. 12. (December 2005), pp. 1620-1631. by J. E. Galagan, M. R. Henn, L. J. Ma, C. A. Cuomo, B. Birren posted by 2 people radek GustavoLacerda
	Emergence of a new disease as a result of interspecific virulence gene transfer [My Copy] Nature Genetics, Vol. 38, No. 8. (09 July 2006), pp. 953-956. by Timothy L. Friesen, Eva H. Stukenbrock, Zhaohui Liu, et al.Steven Meinhardt, Hua Ling, Justin D. Faris, Jack B. Rasmussen, Peter S. Solomon, Bruce A. Mcdonald, Richard P. Oliver posted by 1 person radek
	Phosphoproteome analysis of capacitated human sperm. Evidence of tyrosine phosphorylation of a kinase-anchoring protein 3 and valosin-containing protein/p97 during capacitation. [My Copy] J Biol Chem, Vol. 278, No. 13. (28 March 2003), pp. 11579-11589. by S. Ficarro, O. Chertihin, V. A. Westbrook, et al.F. White, F. Jayes, P. Kalab, J. A. Marto, J. Shabanowitz, J. C. Herr, D. F. Hunt, P. E. Visconti posted by 2 people radek tmt
	Phosphoproteome analysis by mass spectrometry and its application to Saccharomyces cerevisiae. [My Copy] Nat Biotechnol, Vol. 20, No. 3. (March 2002), pp. 301-305. by S. B. Ficarro, M. L. McCleland, P. T. Stukenberg, et al.D. J. Burke, M. M. Ross, J. Shabanowitz, D. F. Hunt, F. M. White posted by 2 people chemnerd1 radek
	Consistency matrices: quantified structure alignments for sets of related proteins. [My Copy] Proteins, Vol. 51, No. 1. (1 April 2003), pp. 1-9. by I. Van Walle, I. Lasters, L. Wyns posted by 1 person radek
	Consistency of optimal sequence alignments. [My Copy] Bull Math Biol, Vol. 52, No. 4. (1990), pp. 509-525. by O. Gotoh posted by 1 person radek
	Development and validation of a consistency based multiple structure alignment algorithm [My Copy] Bioinformatics, Vol. 22, No. 9. (1 May 2006), pp. 1080-1087. by Jessica Ebert, Douglas Brutlag posted by 4 people radek marcius BioinfoCIPF SGU-CIPF
	Low conservation of alternative splicing patterns in the human and mouse genomes. [My Copy] Hum Mol Genet, Vol. 12, No. 11. (1 June 2003), pp. 1313-1320. by R. N. Nurtdinov, I. I. Artamonova, A. A. Mironov, M. S. Gelfand posted by 2 people eoghanharr radek
	The alternative genome. [My Copy] Sci Am, Vol. 292, No. 4. (April 2005), pp. 40-47. by G. Ast posted by 1 person radek
	Genome-wide detection of alternative splicing in expressed sequences using partial order multiple sequence alignment graphs. [My Copy] Pac Symp Biocomput (2004), pp. 29-41. by C. Grasso, B. Modrek, Y. Xing, C. Lee posted by 1 person radek
	The importance of being divisible by three in alternative splicing. [My Copy] Nucleic Acids Res, Vol. 33, No. 17. (2005), pp. 5574-5582. by A. Magen, G. Ast posted by 1 person radek
	A genome-wide study of dual coding regions in human alternatively spliced genes. [My Copy] Genome Res (19 December 2005) by Han Liang, Laura F F. Landweber posted by 1 person radek
	Sequencing of Aspergillus nidulans and comparative analysis with A. fumigatus and A. oryzae [My Copy] Nature, Vol. 438, No. 7071., pp. 1105-1115. by James E. Galagan, Sarah E. Calvo, Christina Cuomo, et al.Li-Jun Ma, Jennifer R. Wortman, Serafim Batzoglou, Su-In Lee, Meray Baştürkmen, Christina C. Spevak, John Clutterbuck, Vladimir Kapitonov, Jerzy Jurka, Claudio Scazzocchio, Mark Farman, Jonathan Butler, Seth Purcell, Steve Harris, Gerhard H. Braus, Oliver Draht, Silke Busch, Christophe D'Enfert, Christiane Bouchier, Gustavo H. Goldman, Deborah Bell-Pedersen, Sam Griffiths-Jones, John H. Doonan, Jaehyuk Yu, Kay Vienken, Arnab Pain, Michael Freitag, Eric U. Selker, David B. Archer, Miguel, Berl R. Oakley, Michelle Momany, Toshihiro Tanaka, Toshitaka Kumagai, Kiyoshi Asai, Masayuki Machida, William C. Nierman, David W. Denning, Mark Caddick, Michael Hynes, Mathieu Paoletti, Reinhard Fischer, Bruce Miller, Paul Dyer, Matthew S. Sachs, Stephen A. Osmani, Bruce W. Birren posted by 2 people radek alexl
	Protein Modularity of Alternatively Spliced Exons Is Associated with Tissue-Specific Regulation of Alternative Splicing. [My Copy] PLoS Genet, Vol. 1, No. 3. (16 September 2005) by Yi Xing, Christopher J J. Lee posted by 1 person radek
	Identification and analysis of alternative splicing events conserved in human and mouse [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 102, No. 8. (22 February 2005), pp. 2850-2855. by Gene W. Yeo, Eric Van Nostrand, Dirk Holste, Tomaso Poggio, Christopher B. Burge posted by 6 people jonilaserson eoghanharr radek penka stajich Nie
	Alternative splicing in the human, mouse and rat genomes is associated with an increased frequency of exon creation and/or loss. [My Copy] Nat Genet, Vol. 34, No. 2. (June 2003), pp. 177-180. by B. Modrek, C. J. Lee posted by 3 people inesdesantiago radek frohike
	Tests for gene clustering. [My Copy] J Comput Biol, Vol. 10, No. 3-4. (2003), pp. 453-482. by D. Durand, D. Sankoff posted by 1 person radek
	Evidence of functional selection pressure for alternative splicing events that accelerate evolution of protein subsequences. [My Copy] Proc Natl Acad Sci U S A, Vol. 102, No. 38. (20 September 2005), pp. 13526-13531. by Y. Xing, C. Lee posted by 7 people aprasad radek penka bsmagic Bioinformatics Nie bioinplant
	Probable neuroimmunological link between Toxoplasma and cytomegalovirus infections and personality changes in the human host. [My Copy] BMC Infect Dis, Vol. 5 (6 July 2005) by M. Novotná, J. Hanusova, J. Klose, et al.M. Preiss, J. Havlicek, K. Roubalová, J. Flegr posted by 3 people radek craigtalbert ascidiacea
	Identification of nine human-specific frameshift mutations by comparative analysis of the human and the chimpanzee genome sequences. [My Copy] Bioinformatics, Vol. 21 Suppl 1 (1 June 2005) by Y. Hahn, B. Lee posted by 1 person radek
	Vesicle trafficking: pleasure and pain from SM genes. [My Copy] Trends Cell Biol, Vol. 13, No. 4. (April 2003), pp. 177-186. by R. F. Toonen, M. Verhage posted by 2 people radek moborg
	Intronic sequences flanking alternatively spliced exons are conserved between human and mouse. [My Copy] Genome Res, Vol. 13, No. 7. (July 2003), pp. 1631-1637. by R. Sorek, G. Ast posted by 2 people radek maryee
	Conservation of human alternative splice events in mouse. [My Copy] Nucleic Acids Res, Vol. 31, No. 10. (15 May 2003), pp. 2544-2552. by T. A. Thanaraj, F. Clark, J. Muilu posted by 1 person radek
	Transcriptome and genome conservation of alternative splicing events in humans and mice. [My Copy] Pac Symp Biocomput (2004), pp. 66-77. by C. W. Sugnet, W. J. Kent, M. Ares, D. Haussler posted by 1 person radek
	Phylogenomics of the reproductive parasite Wolbachia pipientis wMel: a streamlined genome overrun by mobile genetic elements. [My Copy] PLoS Biol, Vol. 2, No. 3. (March 2004) by M. Wu, L. V. Sun, J. Vamathevan, et al.M. Riegler, R. Deboy, J. C. Brownlie, E. A. McGraw, W. Martin, C. Esser, N. Ahmadinejad, C. Wiegand, R. Madupu, M. J. Beanan, L. M. Brinkac, S. C. Daugherty, A. S. Durkin, J. F. Kolonay, W. C. Nelson, Y. Mohamoud, P. Lee, K. Berry, M. B. Young, T. Utterback, J. Weidman, W. C. Nierman, I. T. Paulsen, K. E. Nelson, H. Tettelin, S. L. O'Neill, J. A. Eisen posted by 5 people operon knaseanka radek wrowell Cline_lab
	Genomes on the shrink. [My Copy] Proc Natl Acad Sci U S A, Vol. 102, No. 34. (23 August 2005), pp. 11959-11960. by H. Ochman posted by 2 people aprasad radek
	Coevolution of gene expression among interacting proteins. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 101, No. 24. (15 June 2004), pp. 9033-9038. by H. B. Fraser, A. E. Hirsh, D. P. Wall, M. B. Eisen posted by 13 people qluo jimineep adamnellis Robinder stevanspringer lfriedl dayjm radek cmm Garamonfok kdl FAB-lab pradiptaray
	The REPRO server: finding protein internal sequence repeats through the Web. [My Copy] Trends Biochem Sci, Vol. 25, No. 10. (October 2000), pp. 515-517. by R. A. George, J. Heringa posted by 1 person radek
	Bacterial genome size reduction by experimental evolution [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 102, No. 34. (23 August 2005), pp. 12112-12116. by A. I. Nilsson, S. Koskiniemi, S. Eriksson, E. Kugelberg, J. C. D. Hinton, D. I. Andersson posted by 7 people codonusage druvus operon bjorns aprasad dayjm radek
	Genome reduction in the alpha-Proteobacteria. [My Copy] Curr Opin Microbiol (11 August 2005) by Björn Sällström, Siv Ge G. Andersson posted by 5 people johanviklund operon knaseanka bjorns radek
	Comparative analyses of multi-species sequences from targeted genomic regions [My Copy] Nature, Vol. 424, No. 6950. (14 August 2003), pp. 788-793. by J. W. Thomas, J. W. Touchman, R. W. Blakesley, et al.G. G. Bouffard, S. M. Beckstrom-Sternberg, E. H. Margulies, M. Blanchette, A. C. Siepel, P. J. Thomas, J. C. Mcdowell, B. Maskeri, N. F. Hansen, M. S. Schwartz, R. J. Weber, W. J. Kent, D. Karolchik, T. C. Bruen, R. Bevan, D. J. Cutler, S. Schwartz, L. Elnitski, J. R. Idol, A. B. Prasad, S. Q. Lee-Lin, V. V. B. Maduro, T. J. Summers, M. E. Portnoy, N. L. Dietrich, N. Akhter, K. Ayele, B. Benjamin, K. Cariaga, C. P. Brinkley, S. Y. Brooks, S. Granite, X. Guan, J. Gupta, P. Haghighi, S. L. Ho, M. C. Huang, E. Karlins, P. L. Laric, R. Legaspi, M. J. Lim, Q. L. Maduro, C. A. Masiello, S. D. Mastrian, J. C. Mccloskey, R. Pearson, S. Stantripop, E. E. Tiongson, J. T. Tran, C. Tsurgeon, J. L. Vogt, M. A. Walker, K. D. Wetherby, L. S. Wiggins, A. C. Young, L. H. Zhang, K. Osoegawa, B. Zhu, B. Zhao, C. L. Shu, P. J. De Jong, C. E. Lawrence, A. F. Smit, A. Chakravarti, D. Haussler, P. Green, W. Miller, E. D. Green posted by 7 people stharward pradiptaray aprasad radek adepace AaronDarling EisenLab
	ProbCons: Probabilistic consistency-based multiple sequence alignment. [My Copy] Genome Res, Vol. 15, No. 2. (February 2005), pp. 330-340. by C. B. Do, M. S. Mahabhashyam, M. Brudno, S. Batzoglou posted by 9 people BioNica bpb radek balajis stajich olympos Mycology newton1234 gjuggler
	Computational inference of scenarios for alpha-proteobacterial genome evolution. [My Copy] Proc Natl Acad Sci U S A, Vol. 101, No. 26. (29 June 2004), pp. 9722-9727. by B. Boussau, E. O. Karlberg, A. C. Frank, B. A. Legault, S. G. Andersson posted by 4 people johanviklund knaseanka bjorns radek
	Alternative splicing: increasing diversity in the proteomic world. [My Copy] Trends Genet, Vol. 17, No. 2. (February 2001), pp. 100-107. by B. R. Graveley posted by 3 people macowell radek BUiGEM
	Induction of changes in human behaviour by the parasitic protozoan Toxoplasma gondii. [My Copy] Parasitology, Vol. 113 ( Pt 1) (July 1996), pp. 49-54. by J. Flegr, S. Zitková, P. Kodym, D. Frynta posted by 3 people flegr radek craigtalbert
	Comparative genomics, minimal gene-sets and the last universal common ancestor. [My Copy] Nat Rev Microbiol, Vol. 1, No. 2. (November 2003), pp. 127-136. by E. V. Koonin posted by 7 people ana dayjm radek Ayest gbart structural_bioinformatics Bioinformatics
	Accurate detection of very sparse sequence motifs. [My Copy] J Comput Biol, Vol. 11, No. 5. (2004), pp. 843-857. by A. Heger, M. Lappe, L. Holm posted by 2 people Terkko radek
	HyPhy: hypothesis testing using phylogenies [My Copy] Bioinformatics, Vol. 21, No. 5. (01 March 2005), pp. 676-679. by S. L. K. Sergei, Simon D. W. Frost, Spencer V. Muse posted by 6 people BioNica druvus operon radek Natasha Garamonfok
	Metagenes and molecular pattern discovery using matrix factorization. [My Copy] Proc Natl Acad Sci U S A, Vol. 101, No. 12. (23 March 2004), pp. 4164-4169. by J. P. Brunet, P. Tamayo, T. R. Golub, J. P. Mesirov posted by 13 people ipark-kaist svozil kentsis dragonrez radek yas balicea yama_tah aviad_work ivokwee GeeSharpMinor T_lab kintoki
	Tracking repeats using significance and transitivity. [My Copy] Bioinformatics, Vol. 20 Suppl 1 (4 August 2004) by R. Szklarczyk, J. Heringa posted by 4 people druvus greg radek feenstra
	Genome wide identification and classification of alternative splicing based on EST data. [My Copy] Bioinformatics, Vol. 20, No. 16. (1 November 2004), pp. 2579-2585. by S. Gupta, D. Zink, B. Korn, M. Vingron, S. A. Haas posted by 4 people poschm greg cantupaz radek
	SYSTERS, GeneNest, SpliceNest: exploring sequence space from genome to protein. [My Copy] Nucleic Acids Res, Vol. 30, No. 1. (1 January 2002), pp. 299-300. by A. Krause, S. A. Haas, E. Coward, M. Vingron posted by 2 people greg radek
	The Sorcerer II Global Ocean Sampling Expedition: Expanding the Universe of Protein Families. [My Copy] PLoS Biol, Vol. 5, No. 3. (13 March 2007) by Shibu Yooseph, Granger Sutton, Douglas B B. Rusch, et al.Aaron L L. Halpern, Shannon J J. Williamson, Karin Remington, Jonathan A A. Eisen, Karla B B. Heidelberg, Gerard Manning, Weizhong Li, Lukasz Jaroszewski, Piotr Cieplak, Christopher S S. Miller, Huiying Li, Susan T T. Mashiyama, Marcin P P. Joachimiak, Christopher van Belle, John-Marc M. Chandonia, David A A. Soergel, Yufeng Zhai, Kannan Natarajan, Shaun Lee, Benjamin J J. Raphael, Vineet Bafna, Robert Friedman, Steven E E. Brenner, Adam Godzik, David Eisenberg, Jack E E. Dixon, Susan S S. Taylor, Robert L L. Strausberg, Marvin Frazier, J Craig C. Venter posted by 14 people Thaverkamp skembel AaronDarling azazello jmeppley kaspermunch michC Bioinformatics mjetten microbiology_nijmegen vrich jlgreen Green Lab iSEEM
	Automatic generation of gene finders for eukaryotic species [My Copy] BMC Bioinformatics, Vol. 7, No. 1. (2006) by Kasper Munch, Anders Krogh posted by 5 people bertelsen kaspermunch GustavoLacerda Bioinformatics alexl
	Evidence of ancient DNA reveals the first European lineage in Iron Age Central China. [My Copy] Proc Biol Sci (24 April 2007) by C Z Z. Xie, C X X. Li, Y Q Q. Cui, et al.Q C C. Zhang, Y Q Q. Fu, H Zhu, H Zhou posted by 2 people kaspermunch Bioinformatics
	Genetic isolation of a now extinct population of bottlenose dolphins (Tursiops truncatus). [My Copy] Proc Biol Sci (24 April 2007) by Courtney Nichols, Jerry Herman, Oscar E E. Gaggiotti, Keith M M. Dobney, Kim Parsons, A Rus R. Hoelzel posted by 4 people kaspermunch cursonivel1 Bioinformatics cursonivel1
	Molecular coproscopy: dung and diet of the extinct ground sloth Nothrotheriops shastensis. [My Copy] Science, Vol. 281, No. 5375. (17 July 1998), pp. 402-406. by H. N. Poinar, M. Hofreiter, W. G. Spaulding, et al.P. S. Martin, B. A. Stankiewicz, H. Bland, R. P. Evershed, G. Possnert, S. Pääbo posted by 2 people kaspermunch Bioinformatics
	The Sorcerer II Global Ocean Sampling Expedition: Northwest Atlantic through Eastern Tropical Pacific [My Copy] PLoS Biol, Vol. 5, No. 3. (13 March 2007), e77. by Douglas B. Rusch, Aaron L. Halpern, Granger Sutton, et al.Karla B. Heidelberg, Shannon Williamson, Shibu Yooseph, Dongying Wu, Jonathan A. Eisen, Jeff M. Hoffman, Karin Remington, Karen Beeson, Bao Tran, Hamilton Smith, Holly Baden-Tillson, Clare Stewart, Joyce Thorpe, Jason Freeman, Cynthia Andrews-Pfannkoch, Joseph E. Venter, Kelvin Li, Saul Kravitz, John F. Heidelberg, Terry Utterback, Yu-Hui Rogers, Luisa I. Falcón, Valeria Souza, Germán Bonilla-Rosso, Luis E. Eguiarte, David M. Karl, Shubha Sathyendranath, Trevor Platt, Eldredge Bermingham, Victor Gallardo, Giselle Tamayo-Castillo, Michael R. Ferrari, Robert L. Strausberg, Kenneth Nealson, Robert Friedman, Marvin Frazier, J. Craig Venter posted by 23 people antonkratz dakelley maria_hauser mlangill AaronDarling azazello skembel aramata jmeppley kaspermunch michC jdelcampo stajich skoch3 beatrizfernandez kinestetika Bioinformatics Microbial-Ecology Koch_Lab microbiology_nijmegen Thaverkamp djkt iSEEM
	Use of rpoB and 16S rRNA genes to analyse bacterial diversity of a tropical soil using PCR and DGGE. [My Copy] Lett Appl Microbiol, Vol. 35, No. 4. (2002), pp. 316-320. by R. S. Peixoto, H. L. da Costa Coutinho, N. G. Rumjanek, A. Macrae, A. S. Rosado posted by 2 people kaspermunch Bioinformatics
	Molecular analysis of Neanderthal DNA from the northern Caucasus. [My Copy] Nature, Vol. 404, No. 6777. (30 March 2000), pp. 490-493. by I. V. Ovchinnikov, A. Götherström, G. P. Romanova, V. M. Kharitonov, K. Lidén, W. Goodwin posted by 3 people kaspermunch ryanraaum Bioinformatics
	Neandertal DNA sequences and the origin of modern humans. [My Copy] Cell, Vol. 90, No. 1. (11 July 1997), pp. 19-30. by M. Krings, A. Stone, R. W. Schmitz, H. Krainitzki, M. Stoneking, S. Pääbo posted by 2 people kaspermunch Bioinformatics
	Phylogenies from molecular sequences: inference and reliability. [My Copy] Annu Rev Genet, Vol. 22 (1988), pp. 521-565. by J. Felsenstein posted by 2 people kaspermunch Bioinformatics
	Nuclear gene sequences from a late pleistocene sloth coprolite. [My Copy] Curr Biol, Vol. 13, No. 13. (1 July 2003), pp. 1150-1152. by H. Poinar, M. Kuch, G. McDonald, P. Martin, S. Pääbo posted by 2 people kaspermunch Bioinformatics
	Evolution, systematics, and phylogeography of pleistocene horses in the new world: a molecular perspective. [My Copy] PLoS biology, Vol. 3, No. 8. (August 2005) by Jaco Weinstock, Eske Willerslev, Andrei Sher, et al.Wenfei Tong, Simon Y. Ho, Dan Rubenstein, John Storer, James Burns, Larry Martin, Claudio Bravi, Alfredo Prieto, Duane Froese, Eric Scott, Lai Xulong, Alan Cooper posted by 3 people usagi-kirin kaspermunch Bioinformatics
	Rise and fall of the Beringian steppe bison. [My Copy] Science, Vol. 306, No. 5701. (26 November 2004), pp. 1561-1565. by B. Shapiro, A. J. Drummond, A. Rambaut, et al.M. C. Wilson, P. E. Matheus, A. V. Sher, O. G. Pybus, M. T. Gilbert, I. Barnes, J. Binladen, E. Willerslev, A. J. Hansen, G. F. Baryshnikov, J. A. Burns, S. Davydov, J. C. Driver, D. G. Froese, C. R. Harington, G. Keddie, P. Kosintsev, M. L. Kunz, L. D. Martin, R. O. Stephenson, J. Storer, R. Tedford, S. Zimov, A. Cooper posted by 2 people kaspermunch Bioinformatics
	Distinguishing migration from isolation: a Markov chain Monte Carlo approach. [My Copy] Genetics, Vol. 158, No. 2. (June 2001), pp. 885-896. by R. Nielsen, J. Wakeley posted by 3 people druvus kaspermunch Bioinformatics
	Line-of-descent and genealogical processes, and their applications in population genetics models. [My Copy] Theor Popul Biol, Vol. 26, No. 2. (October 1984), pp. 119-164. by S. Tavaré posted by 3 people ilyashl kaspermunch Bioinformatics
	Properties of a neutral allele model with intragenic recombination. [My Copy] Theor Popul Biol, Vol. 23, No. 2. (April 1983), pp. 183-201. by R. R. Hudson posted by 3 people renewang kaspermunch Bioinformatics
	Genealogical inference from microsatellite data. [My Copy] Genetics, Vol. 150, No. 1. (September 1998), pp. 499-510. by I. J. Wilson, D. J. Balding posted by 3 people druvus kaspermunch Bioinformatics
	Maximum likelihood estimation of population divergence times and population phylogenies under the infinite sites model. [My Copy] Theor Popul Biol, Vol. 53, No. 2. (April 1998), pp. 143-151. by R. Nielsen posted by 2 people kaspermunch Bioinformatics
	The coalescent process with selfing. [My Copy] Genetics, Vol. 146, No. 3. (July 1997), pp. 1185-1195. by M. Nordborg, P. Donnelly posted by 2 people kaspermunch Bioinformatics
	Estimating effective population size and mutation rate from sequence data using Metropolis-Hastings sampling. [My Copy] Genetics, Vol. 140, No. 4. (August 1995), pp. 1421-1430. by M. K. Kuhner, J. Yamato, J. Felsenstein posted by 2 people kaspermunch Bioinformatics
	Sampling theory for neutral alleles in a varying environment. [My Copy] Philos Trans R Soc Lond B Biol Sci, Vol. 344, No. 1310. (29 June 1994), pp. 403-410. by R. C. Griffiths, S. Tavaré posted by 3 people renewang kaspermunch Bioinformatics
	Estimating effective population size from samples of sequences: inefficiency of pairwise and segregating sites as compared to phylogenetic estimates. [My Copy] Genet Res, Vol. 59, No. 2. (April 1992), pp. 139-147. by J. Felsenstein posted by 2 people kaspermunch Bioinformatics
	Inferring evolutionary rates using serially sampled sequences from several populations. [My Copy] Mol Biol Evol, Vol. 20, No. 12. (December 2003), pp. 2010-2018. by A. G. Rodrigo, M. Goode, R. Forsberg, H. A. Ross, A. Drummond posted by 2 people kaspermunch Bioinformatics
	Tree measures and the number of segregating sites in time-structured population samples. [My Copy] BMC Genet, Vol. 6 (2005) by R. Forsberg, A. J. Drummond, J. Hein posted by 2 people kaspermunch Bioinformatics
	Reanalysis of Eurasian population history: ancient DNA evidence of population affinities. [My Copy] Hum Biol, Vol. 78, No. 4. (August 2006), pp. 413-440. by C. C. Bennett, F. A. Kaestle posted by 3 people kaspermunch candypmcg Bioinformatics
	Sequencing and analysis of Neanderthal genomic DNA. [My Copy] Science, Vol. 314, No. 5802. (17 November 2006), pp. 1113-1118. by J. P. Noonan, G. Coop, S. Kudaravalli, et al.D. Smith, J. Krause, J. Alessi, F. Chen, D. Platt, S. Pääbo, J. K. Pritchard, E. M. Rubin posted by 12 people azazello kaspermunch Archaeogenetics theseuskf biblio24 vplagnol Mochimasa ibuch ryanraaum Bioinformatics hpaces myourshaw
	Genomic sequencing of Pleistocene cave bears. [My Copy] Science, Vol. 309, No. 5734. (22 July 2005), pp. 597-599. by J. P. Noonan, M. Hofreiter, D. Smith, et al.J. R. Priest, N. Rohland, G. Rabeder, J. Krause, J. C. Detter, S. Pääbo, E. M. Rubin posted by 4 people kaspermunch joshuashen Bioinformatics werwiesel
	Analysis of one million base pairs of Neanderthal DNA [My Copy] Nature, Vol. 444, No. 7117., pp. 330-336. by Richard E. Green, Johannes Krause, Susan E. Ptak, et al.Adrian W. Briggs, Michael T. Ronan, Jan F. Simons, Lei Du, Michael Egholm, Jonathan M. Rothberg, Maja Paunovic, Svante Pääbo posted by 6 people leechuck pradiptaray kaspermunch Archaeogenetics EsepBib Bioinformatics
	Diverse plant and animal genetic records from Holocene and Pleistocene sediments. [My Copy] Science, Vol. 300, No. 5620. (2 May 2003), pp. 791-795. by E. Willerslev, A. J. Hansen, J. Binladen, et al.T. B. Brand, M. T. Gilbert, B. Shapiro, M. Bunce, C. Wiuf, D. A. Gilichinsky, A. Cooper posted by 2 people kaspermunch Bioinformatics
	TaxI: a software tool for DNA barcoding using distance methods. [My Copy] Philos Trans R Soc Lond B Biol Sci, Vol. 360, No. 1462. (29 October 2005), pp. 1975-1980. by D. Steinke, M. Vences, W. Salzburger, A. Meyer posted by 3 people operon kaspermunch Bioinformatics
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	A likelihood ratio test for species membership based on DNA sequence data. [My Copy] Philos Trans R Soc Lond B Biol Sci, Vol. 360, No. 1462. (29 October 2005), pp. 1969-1974. by M. V. Matz, R. Nielsen posted by 3 people druvus kaspermunch Bioinformatics
	Application of the BAX for screening/genus Listeria polymerase chain reaction system for monitoring Listeria species in cold-smoked fish and in the smoked fish processing environment. [My Copy] Journal of food protection, Vol. 63, No. 3. (March 2000), pp. 343-346. by D. M. Norton, M. McCamey, K. J. Boor, M. Wiedmann posted by 2 people kaspermunch Bioinformatics
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	Testing the utility of partial COI sequences for phylogenetic estimates of gastropod relationships. [My Copy] Mol Phylogenet Evol, Vol. 29, No. 3. (December 2003), pp. 641-647. by E. A. Remigio, P. D. Hebert posted by 2 people kaspermunch Bioinformatics
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	Tracking Down Human Contamination in Ancient Human Teeth. [My Copy] Mol Biol Evol (29 June 2006) by María Lourdes L. Sampietro, M Thomas P T. Gilbert, Oscar Lao, et al.David Caramelli, Martina Lari, Jaume Bertranpetit, Carles Lalueza-Fox posted by 6 people kaspermunch dchughes Bioinformatics G4ID Genetics-of-Gambling B_Adair
	On the significance of sequence alignments when using multiple scoring matrices. [My Copy] Bioinformatics, Vol. 20, No. 6. (12 April 2004), pp. 881-887. by F. Frommlet, A. Futschik, M. Bogdan posted by 3 people treangen kaspermunch Bioinformatics
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	Multilocus methods for estimating population sizes, migration rates and divergence time, with applications to the divergence of Drosophila pseudoobscura and D. persimilis. [My Copy] Genetics, Vol. 167, No. 2. (June 2004), pp. 747-760. by J. Hey, R. Nielsen posted by 3 people kaspermunch AaronDarling Bioinformatics
	GenRGenS: software for generating random genomic sequences and structures. [My Copy] Bioinformatics (30 March 2006) by Yann Ponty, Michel Termier, Alain Denise posted by 2 people kaspermunch Bioinformatics
	DNA sequence of the mitochondrial hypervariable region II from the neandertal type specimen. [My Copy] Proc Natl Acad Sci U S A, Vol. 96, No. 10. (11 May 1999), pp. 5581-5585. by M. Krings, H. Geisert, R. W. Schmitz, H. Krainitzki, S. Pääbo posted by 4 people kaspermunch Archaeogenetics Mochimasa Bioinformatics
	A view of Neandertal genetic diversity. [My Copy] Nat Genet, Vol. 26, No. 2. (October 2000), pp. 144-146. by M. Krings, C. Capelli, F. Tschentscher, et al.H. Geisert, S. Meyer, A. von Haeseler, K. Grossschmidt, G. Possnert, M. Paunovic, S. Pääbo posted by 3 people kaspermunch Archaeogenetics Bioinformatics
	Statistical Approaches for DNA Barcoding [My Copy] Systematic Biology, Vol. 55, No. 1. (February 2006), pp. 162-169. by Rasmus Nielsen, Mikhail Matz posted by 2 people kaspermunch Bioinformatics
	Rank order metrics for quantifying the association of sequence features with gene regulation. [My Copy] Bioinformatics, Vol. 19, No. 2. (22 January 2003), pp. 212-218. by N. D. Clarke, J. A. Granek posted by 4 people kaspermunch nklee Bioinformatics xili03
	Computational analysis of composite regulatory elements [My Copy] Mammalian Genome, Vol. 13, No. 6. (21 June 2002), pp. 327-332. by Ping Qiu, Wei Ding, Ying Jiang, Jonathan R. Greene, Luquan Wang posted by 3 people tonamswish kaspermunch Bioinformatics
	Calibrating E-values for hidden Markov models using reverse-sequence null models. [My Copy] Bioinformatics, Vol. 21, No. 22. (15 November 2005), pp. 4107-4115. by K. Karplus, R. Karchin, G. Shackelford, R. Hughey posted by 5 people kaspermunch zhangli Bioinformatics Computational_Systems_Biology Bioinformatics_MDACC
	Statistical analysis of over-represented words in human promoter sequences. [My Copy] Nucleic Acids Res, Vol. 32, No. 3. (2004), pp. 949-958. by L. Mariño-Ramírez, J. L. Spouge, G. C. Kanga, D. Landsman posted by 4 people kaspermunch smiddha Bioinformatics xili03
	TOUCAN 2: the all-inclusive open source workbench for regulatory sequence analysis. [My Copy] Nucleic Acids Res, Vol. 33, No. Web Server issue. (1 July 2005) by S. Aerts, P. Van Loo, G. Thijs, et al.H. Mayer, R. de Martin, Y. Moreau, B. De Moor posted by 3 people natstreet kaspermunch Bioinformatics
	Transcriptional regulatory code of a eukaryotic genome [My Copy] Nature, Vol. 431, No. 7004. (02 September 2004), pp. 99-104. by Christopher T. Harbison, D. Benjamin Gordon, Tong I. Lee, et al.Nicola J. Rinaldi, Kenzie D. Macisaac, Timothy W. Danford, Nancy M. Hannett, Jean-Bosco Tagne, David B. Reynolds, Jane Yoo, Ezra G. Jennings, Julia Zeitlinger, Dmitry K. Pokholok, Manolis Kellis, P. Alex Rolfe, Ken T. Takusagawa, Eric S. Lander, David K. Gifford, Ernest Fraenkel, Richard A. Young posted by 38 people viren4388 daveGerrard Dulce talponer wowalz siebert alokm tuck lyongu kaspermunch dpollard balicea kt dchughes nirfriedman cmm nickluscombe kengg gespim koller lusk nklee Bioinformatics EisenLab FAB-lab G4ID EBI-regulation Plantandetc Genetics-of-Gambling cisevol BergmanLab njcitulike xili03 brant mariakmejia kristallreiner snow_dragon aalibes